Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899149

Identifier: 159899149

GI number: 159899149

Start: 3375026

End: 3375826

Strand: Direct

Name: 159899149

Synonym: Haur_2630

Alternate gene names: NA

Gene position: 3375026-3375826 (Clockwise)

Preceding gene: 159899148

Following gene: 159899161

Centisome position: 53.18

GC content: 53.31

Gene sequence:

>801_bases
ATGGCCTTAACCTTTCAAACCGCCCCACGCATTTCGCAAGCAGAGTTTCGGCGCGTGCTCGAACGTGGCACAGAGCTTGG
TCGCTCGCCCGTCGCCCCTTTTGCCGATGAGTGCTACCAAATTATTGTTGGCTATGGCTTAGATCCAGCAGTGGCACTCG
GTTTTTTCGCCCACGAATCGCAATTTGGCCTTGATGGTGTTTCAACCAAAAGCCTCAATTGGGGCAATGTTCGCACGCCT
TACGATCCCAAACGAGCTGCCGGAACCGTGCAAAGTGCTAGCGGTCATGGCGAATTCGTCTGTTTTCGTTCGTGGCAGGA
TGGGTTGCGCGATTGGTGTGAGCGAATTCTCAATCGCTATATCAAAGAACGTGGCCTAACGACGGTCGATGCGGCGATTC
CAGTCTATGCCCCTTCATCCGATGGCAACAACGAAAAAGCCTATATCCAGCATGTTGAGCGATTGGTAACTCGTTGGCAG
GCGGAAGATCCGCAGCCTGTGGTAGTTTCAACAGGAGGTCCAAGCGTGGCTGAATTACAAGATGCCTTGATGGTCGCAGC
GTTCGAGGCGGTTGGTGCAACCTATCATCCAGAGTGGGCTTTTCATCAATATGCAATGAACGAGGCCAAGGCTGGGCGGT
TTCTTGGCTCGCCACTCGGCGAAAGCAAACGAATCACGGTGGGCGGTCAACAATTTTCGGTGCAAGTCTTTGCGCTCGAT
ACACTCTACACGCCGATTGGCAACCCTGAGAGCAGCACCAACTGGAGCGATATTCGACGGCTCAGTGCTTTGCTCAAGTA
A

Upstream 100 bases:

>100_bases
ATCATATCTATAAAACATCAAATGATTAGATCCTCTAGCCAAAGCCCCAACCAGCAGCTATACTAGCGCCAAGCGTCTGG
ATTGAACGGAGGTTGCAACG

Downstream 100 bases:

>100_bases
GCTAGAAGTTCGCAATCAAATGCAGCGCAAAGGTCATGAGATCAGGCACAATCAAATCGGGGGTATGCTGCGAGGCTTCG
GTGGTGGCTTGCGGTCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MALTFQTAPRISQAEFRRVLERGTELGRSPVAPFADECYQIIVGYGLDPAVALGFFAHESQFGLDGVSTKSLNWGNVRTP
YDPKRAAGTVQSASGHGEFVCFRSWQDGLRDWCERILNRYIKERGLTTVDAAIPVYAPSSDGNNEKAYIQHVERLVTRWQ
AEDPQPVVVSTGGPSVAELQDALMVAAFEAVGATYHPEWAFHQYAMNEAKAGRFLGSPLGESKRITVGGQQFSVQVFALD
TLYTPIGNPESSTNWSDIRRLSALLK

Sequences:

>Translated_266_residues
MALTFQTAPRISQAEFRRVLERGTELGRSPVAPFADECYQIIVGYGLDPAVALGFFAHESQFGLDGVSTKSLNWGNVRTP
YDPKRAAGTVQSASGHGEFVCFRSWQDGLRDWCERILNRYIKERGLTTVDAAIPVYAPSSDGNNEKAYIQHVERLVTRWQ
AEDPQPVVVSTGGPSVAELQDALMVAAFEAVGATYHPEWAFHQYAMNEAKAGRFLGSPLGESKRITVGGQQFSVQVFALD
TLYTPIGNPESSTNWSDIRRLSALLK
>Mature_265_residues
ALTFQTAPRISQAEFRRVLERGTELGRSPVAPFADECYQIIVGYGLDPAVALGFFAHESQFGLDGVSTKSLNWGNVRTPY
DPKRAAGTVQSASGHGEFVCFRSWQDGLRDWCERILNRYIKERGLTTVDAAIPVYAPSSDGNNEKAYIQHVERLVTRWQA
EDPQPVVVSTGGPSVAELQDALMVAAFEAVGATYHPEWAFHQYAMNEAKAGRFLGSPLGESKRITVGGQQFSVQVFALDT
LYTPIGNPESSTNWSDIRRLSALLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29304; Mature: 29173

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTFQTAPRISQAEFRRVLERGTELGRSPVAPFADECYQIIVGYGLDPAVALGFFAHES
CEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC
QFGLDGVSTKSLNWGNVRTPYDPKRAAGTVQSASGHGEFVCFRSWQDGLRDWCERILNRY
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
IKERGLTTVDAAIPVYAPSSDGNNEKAYIQHVERLVTRWQAEDPQPVVVSTGGPSVAELQ
HHHCCCEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHH
DALMVAAFEAVGATYHPEWAFHQYAMNEAKAGRFLGSPLGESKRITVGGQQFSVQVFALD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCEEEEEEEEEE
TLYTPIGNPESSTNWSDIRRLSALLK
EHHCCCCCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure 
ALTFQTAPRISQAEFRRVLERGTELGRSPVAPFADECYQIIVGYGLDPAVALGFFAHES
EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC
QFGLDGVSTKSLNWGNVRTPYDPKRAAGTVQSASGHGEFVCFRSWQDGLRDWCERILNRY
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
IKERGLTTVDAAIPVYAPSSDGNNEKAYIQHVERLVTRWQAEDPQPVVVSTGGPSVAELQ
HHHCCCEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHH
DALMVAAFEAVGATYHPEWAFHQYAMNEAKAGRFLGSPLGESKRITVGGQQFSVQVFALD
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCEEEEEEEEEE
TLYTPIGNPESSTNWSDIRRLSALLK
EHHCCCCCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA