| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899146
Identifier: 159899146
GI number: 159899146
Start: 3370565
End: 3371524
Strand: Reverse
Name: 159899146
Synonym: Haur_2627
Alternate gene names: NA
Gene position: 3371524-3370565 (Counterclockwise)
Preceding gene: 159899150
Following gene: 159899145
Centisome position: 53.12
GC content: 52.71
Gene sequence:
>960_bases ATGACCGAACAATCGATTGATGAATTGTTGCGCTTAGCCAAAGCGGCGGCCAATCAAGGTAATACTGAACAATCGCGAAA ATTGTTGAGCAACATTGTGCAACGCGACCCCAACCACGAGCAAGCATGGCTCTGGCTGAGCGGTGTGGTTGATTCTGCCG ATAAAATGCGTTACTGCTTAGATCGGGTGCTGGCGATTAATCCAACCAATCAACTTGCACTTTCGGCCTTAGAAGATTTT GCTGAGCTGGCCGAGCAGCGCTTTCGCAATCAAACCCAGCCACTGGAAACGCCAACTCAGCCAATTCCCAGCCAAACCGA GCCACTGGAAACTCCAGCCGCCCCGAAACAACCAACCAAGCCGCGCCCGCGTGCTCGTAATGTGGCCATGCCGCGTCCAC GCCCCGAATCGATGATCGAATCGGGGGCGGTGCAAGAGGTGTTGCAAGGCCATCAACGCACAACTTGGGGCTATATTGGA CTTTGGTCGGGCTTAGTGGCAGTGCATATGTTGCTGTTGCGTGCACCCAATTTAGCGCAACAAAGCTTGGTGCAAGCGAT GGGGGTGGTGCTGCAACTTGGGCTGATTATTGCCATTATTCAACTGCCAGCATGGTGGTTATTATTAAACAACCAAAGCC GGATTCAGCACGAAACCTTGGGGCGAACCACCTATTTGGCCTTGCTGAGCGCCATGCTTTGGCGCAGTAGTTTGTTGCTA ATTGCAGGGATTGGGGTGGGTTTGCTCGGCGTTTGGTGGGGCGAGCCATGGCTGGCGGTTTTGCGCTTGGCCCAATTATT GATGGTTGCTTGGAGTGTGTTTAATTTGATGACCCAACTCCTGCGGCCTGCTATTCCAGGCTTAGAACTTGATCGGATGA CGAGTGCCAAAATGACCCAAGCCAGCGTGATGTGGTTTTGTTTATGGGCTGCCAGTTTGGTTGCGGCATGGATTTGGTGA
Upstream 100 bases:
>100_bases TAGCGTTGATCAGTGGTTGCTACCATTATACAGCCTTGATGCTTGTGCGTTGTGCTGCCAACCTCGGTTAAAATAGGCTT GTTAATATTGAGGAAGTAGC
Downstream 100 bases:
>100_bases GTTAATAGCTGTTCATCATTTTATTACATCGCTGACCTAGTTTGTAACCAGGGGCCGTGCTACTATAAAACCGTTCAATA CTGCTAGGAGGAACCAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTEQSIDELLRLAKAAANQGNTEQSRKLLSNIVQRDPNHEQAWLWLSGVVDSADKMRYCLDRVLAINPTNQLALSALEDF AELAEQRFRNQTQPLETPTQPIPSQTEPLETPAAPKQPTKPRPRARNVAMPRPRPESMIESGAVQEVLQGHQRTTWGYIG LWSGLVAVHMLLLRAPNLAQQSLVQAMGVVLQLGLIIAIIQLPAWWLLLNNQSRIQHETLGRTTYLALLSAMLWRSSLLL IAGIGVGLLGVWWGEPWLAVLRLAQLLMVAWSVFNLMTQLLRPAIPGLELDRMTSAKMTQASVMWFCLWAASLVAAWIW
Sequences:
>Translated_319_residues MTEQSIDELLRLAKAAANQGNTEQSRKLLSNIVQRDPNHEQAWLWLSGVVDSADKMRYCLDRVLAINPTNQLALSALEDF AELAEQRFRNQTQPLETPTQPIPSQTEPLETPAAPKQPTKPRPRARNVAMPRPRPESMIESGAVQEVLQGHQRTTWGYIG LWSGLVAVHMLLLRAPNLAQQSLVQAMGVVLQLGLIIAIIQLPAWWLLLNNQSRIQHETLGRTTYLALLSAMLWRSSLLL IAGIGVGLLGVWWGEPWLAVLRLAQLLMVAWSVFNLMTQLLRPAIPGLELDRMTSAKMTQASVMWFCLWAASLVAAWIW >Mature_318_residues TEQSIDELLRLAKAAANQGNTEQSRKLLSNIVQRDPNHEQAWLWLSGVVDSADKMRYCLDRVLAINPTNQLALSALEDFA ELAEQRFRNQTQPLETPTQPIPSQTEPLETPAAPKQPTKPRPRARNVAMPRPRPESMIESGAVQEVLQGHQRTTWGYIGL WSGLVAVHMLLLRAPNLAQQSLVQAMGVVLQLGLIIAIIQLPAWWLLLNNQSRIQHETLGRTTYLALLSAMLWRSSLLLI AGIGVGLLGVWWGEPWLAVLRLAQLLMVAWSVFNLMTQLLRPAIPGLELDRMTSAKMTQASVMWFCLWAASLVAAWIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35737; Mature: 35606
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQSIDELLRLAKAAANQGNTEQSRKLLSNIVQRDPNHEQAWLWLSGVVDSADKMRYCL CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHH DRVLAINPTNQLALSALEDFAELAEQRFRNQTQPLETPTQPIPSQTEPLETPAAPKQPTK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRPRARNVAMPRPRPESMIESGAVQEVLQGHQRTTWGYIGLWSGLVAVHMLLLRAPNLAQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH QSLVQAMGVVLQLGLIIAIIQLPAWWLLLNNQSRIQHETLGRTTYLALLSAMLWRSSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGIGVGLLGVWWGEPWLAVLRLAQLLMVAWSVFNLMTQLLRPAIPGLELDRMTSAKMTQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ASVMWFCLWAASLVAAWIW HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEQSIDELLRLAKAAANQGNTEQSRKLLSNIVQRDPNHEQAWLWLSGVVDSADKMRYCL CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHH DRVLAINPTNQLALSALEDFAELAEQRFRNQTQPLETPTQPIPSQTEPLETPAAPKQPTK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRPRARNVAMPRPRPESMIESGAVQEVLQGHQRTTWGYIGLWSGLVAVHMLLLRAPNLAQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH QSLVQAMGVVLQLGLIIAIIQLPAWWLLLNNQSRIQHETLGRTTYLALLSAMLWRSSLLL HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGIGVGLLGVWWGEPWLAVLRLAQLLMVAWSVFNLMTQLLRPAIPGLELDRMTSAKMTQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ASVMWFCLWAASLVAAWIW HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA