Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yjjG [C]

Identifier: 159899150

GI number: 159899150

Start: 3375828

End: 3376535

Strand: Reverse

Name: yjjG [C]

Synonym: Haur_2631

Alternate gene names: 159899150

Gene position: 3376535-3375828 (Counterclockwise)

Preceding gene: 159899151

Following gene: 159899146

Centisome position: 53.2

GC content: 50.71

Gene sequence:

>708_bases
ATGCCTGGTCGTCCGCTAGTATTGTTTGATATTTATGGCACGCTGGTTGATGTGCATACCGACGAACATCAGCCAGCGTT
GTGGCAACACTTGGCGCAGTGGTTGCGGTATCGTGGTTTGGCTTGTAGTGCTGATAGTTTACATAAGCGTTATTTTGCGG
CGATGCAAGCCAATTTGCCAGCCCATGAAGCCTACCCCGAATGGCAAACTGAGGCGGTTTGGGCTGAGTTGCTCGCTGAA
TTTGGGCTTGATCCGGCTGAGGCGGTGAGTATCACTCAATTATTACGAGTGTTGAGCATTAAGCATCTACGACTTTTCCC
CGATACCAAAGAGGCCTTGCGCATTCTACGCCAGCACTATTGCTTGGGCATTGTTTCTGATGCGCAGCGAGTGATTGCAC
TGGCTGAATTAGCTGAATTAGAAATTCTGGAATATTTCGACCCAATCGTTATTTCTTCGGATTATGCCTATCGTAAGCCC
GACCCGCGTTTGTTTGCTCATGCCTTGGCTCAAGTCGAAACTCCGGCCAACCATCCTTGGTATATTGGCGATAATCTGTT
TCGCGATGTGCAAGGTGCGCAGTTGGCAGGCTTACGGGCGGCCTGGGTCAAGCGACCGCAAGCCACCACCGAAGCCTCGC
AGCATACCCCCGATTTGATTGTGCCTGATCTCATGACCTTTGCGCTGCATTTGATTGCGAACTTCTAG

Upstream 100 bases:

>100_bases
AACGTGGCCAATTTTATATGGGCTGCTATTTGCTGCGGATCGCTCGCAACGAATGGTTTAGCTGGGAATATCGTCAACGG
TTGGTCGCGGAGGCACAGGC

Downstream 100 bases:

>100_bases
CTTACTTGAGCAAAGCACTGAGCCGTCGAATATCGCTCCAGTTGGTGCTGCTCTCAGGGTTGCCAATCGGCGTGTAGAGT
GTATCGAGCGCAAAGACTTG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MPGRPLVLFDIYGTLVDVHTDEHQPALWQHLAQWLRYRGLACSADSLHKRYFAAMQANLPAHEAYPEWQTEAVWAELLAE
FGLDPAEAVSITQLLRVLSIKHLRLFPDTKEALRILRQHYCLGIVSDAQRVIALAELAELEILEYFDPIVISSDYAYRKP
DPRLFAHALAQVETPANHPWYIGDNLFRDVQGAQLAGLRAAWVKRPQATTEASQHTPDLIVPDLMTFALHLIANF

Sequences:

>Translated_235_residues
MPGRPLVLFDIYGTLVDVHTDEHQPALWQHLAQWLRYRGLACSADSLHKRYFAAMQANLPAHEAYPEWQTEAVWAELLAE
FGLDPAEAVSITQLLRVLSIKHLRLFPDTKEALRILRQHYCLGIVSDAQRVIALAELAELEILEYFDPIVISSDYAYRKP
DPRLFAHALAQVETPANHPWYIGDNLFRDVQGAQLAGLRAAWVKRPQATTEASQHTPDLIVPDLMTFALHLIANF
>Mature_234_residues
PGRPLVLFDIYGTLVDVHTDEHQPALWQHLAQWLRYRGLACSADSLHKRYFAAMQANLPAHEAYPEWQTEAVWAELLAEF
GLDPAEAVSITQLLRVLSIKHLRLFPDTKEALRILRQHYCLGIVSDAQRVIALAELAELEILEYFDPIVISSDYAYRKPD
PRLFAHALAQVETPANHPWYIGDNLFRDVQGAQLAGLRAAWVKRPQATTEASQHTPDLIVPDLMTFALHLIANF

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR011950
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26682; Mature: 26551

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRPLVLFDIYGTLVDVHTDEHQPALWQHLAQWLRYRGLACSADSLHKRYFAAMQANLP
CCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
AHEAYPEWQTEAVWAELLAEFGLDPAEAVSITQLLRVLSIKHLRLFPDTKEALRILRQHY
CHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
CLGIVSDAQRVIALAELAELEILEYFDPIVISSDYAYRKPDPRLFAHALAQVETPANHPW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCE
YIGDNLFRDVQGAQLAGLRAAWVKRPQATTEASQHTPDLIVPDLMTFALHLIANF
EECHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGRPLVLFDIYGTLVDVHTDEHQPALWQHLAQWLRYRGLACSADSLHKRYFAAMQANLP
CCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
AHEAYPEWQTEAVWAELLAEFGLDPAEAVSITQLLRVLSIKHLRLFPDTKEALRILRQHY
CHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
CLGIVSDAQRVIALAELAELEILEYFDPIVISSDYAYRKPDPRLFAHALAQVETPANHPW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCE
YIGDNLFRDVQGAQLAGLRAAWVKRPQATTEASQHTPDLIVPDLMTFALHLIANF
EECHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]