Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899145

Identifier: 159899145

GI number: 159899145

Start: 3369286

End: 3370443

Strand: Reverse

Name: 159899145

Synonym: Haur_2626

Alternate gene names: NA

Gene position: 3370443-3369286 (Counterclockwise)

Preceding gene: 159899146

Following gene: 159899138

Centisome position: 53.11

GC content: 48.96

Gene sequence:

>1158_bases
ATGCTCGTGTTAACAATGGTGTTAGCAGGTTGTGGTCAAGAAGATATCACGGCTGAAAACATCGTTACCAAAATTCGGGA
AGGCCAAGCCAATACCAACAATGTTCATGCAATTATGCGCGTCGATTACACCTCGGATCAAGCAACCGGCTTTATCAAGG
CCGAAGTTTGGTCGAGCAAAACTGGCAACAAAGATGCTGAAGGCAACGAAATCAAAGCCTTCCGCGCTAAAATTCTTGAT
GCCAACGATGCTAAGATGGTTGGCGCGGAAGTCGTGACTGATGGTACTCAAGGCTGGTTCTACGACCCCGCTGAAAATAA
AGCCTATGTTGGCACTGCCGCTGAGTTGAGCGAATCGCAAATGGGCCAAGGCCAACAAGATCAAGAGCAAGGCCAAGGCG
GTCGCGGTCGCATGGATCAAACCGAAATGCTCGGCCAATTGCAAGGTGTCGTTGAAAAAGGCTTGGATGCCTTAACAATC
ACAATTTTGGGCGAAGAAGAAGTTGCTGGTTTCAATACCTACAAAGTCAGCATTGCGCCAAAATCAGATGCCCAACAACA
ATTGCCAATCGATTTGTTGGTTGACATCAACGTTTGGTTGGAAGATACCAATTGGATGCCAGTCAAGTTTGTGCTTGATG
CCAAAGATATGGGCAATGTCAGCTTTGCCGCTGAAACCCTTGAAGTCAATAAAGGCATCGATATGGCGATTTTCAGCGCT
CAGCCACCAGCTAACGCCGAAATCGTCAAGATCGCCGATATGATCAAGGAAATGGAACAAGCTGCTCCAGCTACCGATTT
GACCTTGGACGAAGCTAAGGCACAAGCAGGCTTCGAACTGTTGGCTCCCGGCGAAACCTTGGGCACAACCTTGAGCGATG
TTCAATTGTTGACCCTTGCCAAAGCCACCACCGTAATTCAAACCTACGCTGGCGCTGATGTGGAATGGACCTTGGTTCAA
GCCAAAGGCGATGATCCAGATGCTAAGATTCAACGTGGCGGCACTGAAGTAACCGTCCGTGGCGTTCAAGGCACCTTGAT
TGAAGGCCGTGGCAATGTTGGTGTGGTGTTGACTTGGCAAGAAGGCGATGTGACCTTCGTGATTACTGGCAACATCGATG
GCGAACAAGCCACCAAGATTGCCGAAAGCCTCAAGTAA

Upstream 100 bases:

>100_bases
TATTACATCGCTGACCTAGTTTGTAACCAGGGGCCGTGCTACTATAAAACCGTTCAATACTGCTAGGAGGAACCAAATGT
TCAAGCGAATGTGGAGCTTG

Downstream 100 bases:

>100_bases
CCTTCGATTACTCTAAAACTGAAGGCCTGCTCAACCAAGTGTTAGGCAGGCCTTTTTTGATCAATGGCTGAATTTGGTTA
ATCCTAACATACTATGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLVLTMVLAGCGQEDITAENIVTKIREGQANTNNVHAIMRVDYTSDQATGFIKAEVWSSKTGNKDAEGNEIKAFRAKILD
ANDAKMVGAEVVTDGTQGWFYDPAENKAYVGTAAELSESQMGQGQQDQEQGQGGRGRMDQTEMLGQLQGVVEKGLDALTI
TILGEEEVAGFNTYKVSIAPKSDAQQQLPIDLLVDINVWLEDTNWMPVKFVLDAKDMGNVSFAAETLEVNKGIDMAIFSA
QPPANAEIVKIADMIKEMEQAAPATDLTLDEAKAQAGFELLAPGETLGTTLSDVQLLTLAKATTVIQTYAGADVEWTLVQ
AKGDDPDAKIQRGGTEVTVRGVQGTLIEGRGNVGVVLTWQEGDVTFVITGNIDGEQATKIAESLK

Sequences:

>Translated_385_residues
MLVLTMVLAGCGQEDITAENIVTKIREGQANTNNVHAIMRVDYTSDQATGFIKAEVWSSKTGNKDAEGNEIKAFRAKILD
ANDAKMVGAEVVTDGTQGWFYDPAENKAYVGTAAELSESQMGQGQQDQEQGQGGRGRMDQTEMLGQLQGVVEKGLDALTI
TILGEEEVAGFNTYKVSIAPKSDAQQQLPIDLLVDINVWLEDTNWMPVKFVLDAKDMGNVSFAAETLEVNKGIDMAIFSA
QPPANAEIVKIADMIKEMEQAAPATDLTLDEAKAQAGFELLAPGETLGTTLSDVQLLTLAKATTVIQTYAGADVEWTLVQ
AKGDDPDAKIQRGGTEVTVRGVQGTLIEGRGNVGVVLTWQEGDVTFVITGNIDGEQATKIAESLK
>Mature_385_residues
MLVLTMVLAGCGQEDITAENIVTKIREGQANTNNVHAIMRVDYTSDQATGFIKAEVWSSKTGNKDAEGNEIKAFRAKILD
ANDAKMVGAEVVTDGTQGWFYDPAENKAYVGTAAELSESQMGQGQQDQEQGQGGRGRMDQTEMLGQLQGVVEKGLDALTI
TILGEEEVAGFNTYKVSIAPKSDAQQQLPIDLLVDINVWLEDTNWMPVKFVLDAKDMGNVSFAAETLEVNKGIDMAIFSA
QPPANAEIVKIADMIKEMEQAAPATDLTLDEAKAQAGFELLAPGETLGTTLSDVQLLTLAKATTVIQTYAGADVEWTLVQ
AKGDDPDAKIQRGGTEVTVRGVQGTLIEGRGNVGVVLTWQEGDVTFVITGNIDGEQATKIAESLK

Specific function: Unknown

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41219; Mature: 41219

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLTMVLAGCGQEDITAENIVTKIREGQANTNNVHAIMRVDYTSDQATGFIKAEVWSSK
CEEEEEHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCC
TGNKDAEGNEIKAFRAKILDANDAKMVGAEVVTDGTQGWFYDPAENKAYVGTAAELSESQ
CCCCCCCCCCEEEEEHEEECCCCCEEECEEEEECCCCCCEECCCCCCEEEEEHHHHHHHH
MGQGQQDQEQGQGGRGRMDQTEMLGQLQGVVEKGLDALTITILGEEEVAGFNTYKVSIAP
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCEEEEEEECC
KSDAQQQLPIDLLVDINVWLEDTNWMPVKFVLDAKDMGNVSFAAETLEVNKGIDMAIFSA
CCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEC
QPPANAEIVKIADMIKEMEQAAPATDLTLDEAKAQAGFELLAPGETLGTTLSDVQLLTLA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCHHHCCCHHHHHEEHHH
KATTVIQTYAGADVEWTLVQAKGDDPDAKIQRGGTEVTVRGVQGTLIEGRGNVGVVLTWQ
HHHHHHHHHCCCCEEEEEEEECCCCCCHHHHCCCCEEEEEECEEEEEECCCCEEEEEEEE
EGDVTFVITGNIDGEQATKIAESLK
CCCEEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLVLTMVLAGCGQEDITAENIVTKIREGQANTNNVHAIMRVDYTSDQATGFIKAEVWSSK
CEEEEEHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCC
TGNKDAEGNEIKAFRAKILDANDAKMVGAEVVTDGTQGWFYDPAENKAYVGTAAELSESQ
CCCCCCCCCCEEEEEHEEECCCCCEEECEEEEECCCCCCEECCCCCCEEEEEHHHHHHHH
MGQGQQDQEQGQGGRGRMDQTEMLGQLQGVVEKGLDALTITILGEEEVAGFNTYKVSIAP
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCEEEEEEECC
KSDAQQQLPIDLLVDINVWLEDTNWMPVKFVLDAKDMGNVSFAAETLEVNKGIDMAIFSA
CCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEC
QPPANAEIVKIADMIKEMEQAAPATDLTLDEAKAQAGFELLAPGETLGTTLSDVQLLTLA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCHHHCCCHHHHHEEHHH
KATTVIQTYAGADVEWTLVQAKGDDPDAKIQRGGTEVTVRGVQGTLIEGRGNVGVVLTWQ
HHHHHHHHHCCCCEEEEEEEECCCCCCHHHHCCCCEEEEEECEEEEEECCCCEEEEEEEE
EGDVTFVITGNIDGEQATKIAESLK
CCCEEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA