| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899119
Identifier: 159899119
GI number: 159899119
Start: 3337357
End: 3339750
Strand: Direct
Name: 159899119
Synonym: Haur_2600
Alternate gene names: NA
Gene position: 3337357-3339750 (Clockwise)
Preceding gene: 159899118
Following gene: 159899120
Centisome position: 52.59
GC content: 47.99
Gene sequence:
>2394_bases ATGTCGAGAAGTTCAAAATTAATCAGCATCGTTACCCTGTTTTTAATTATGTTAAGTGCTATCACCAAGCCAAGCGCTCC GGTGGCAGCCGTGGAGCCGCAAATTCCAAGCAGCCCTGGCACATGGAGCCAAGATTTTGGCTTATATATAAAAACTGCCG CTAACAGCTATACCCCGTTGCGCCCAATTGAATGGAATGGCACGCTGTATGCAATTTTGAATGGACATCGCAACTTTGAG TCGGGGGTTGGTTATTGGAATGACCAACAATGGCTGAAAATAGATGGCCTGAACGGTCAAGTTGATGTGCTGACGGTGCA TCAAAATCGTTTGTATGTGGCTGGGCGCTTTACCATCGCTGGTAAGAACCTTAACCTTGCCTATTGGGATGGCAACTTGT GGACGGCTATGCCCATGCATGTTGTTCAAGATGGCCCGTTTTTGTTAGCAAGTTATGCCAATCAACTGTATCTTGGGAGC GAAGCCCTGTTGATCGATGATCAAGCCTATGGCAGCTTAGCCCGTTGGGATGGTGAACAGTGGCATGCGGCGGCAGCTGG CATTGAAGGTGTTGTGTTTACCATGCTTTCACGCCCCGATGGCCTCTATCTCGGCGGCTCCTTTTTATATAATGGTCAAG CAACTAGTTTACTGTATTGGAATGGTTCCCAATGGCAAACTGTTGGTGGTGGGGTTTATGGCCATGTGGTTGATTTGAAA TGGGCCAATAACCAACTCTACATCAGTGGGAATTTCACCTCAACGCTTGTGCCAAGTATGCGCAATGTCGCCGCCTGGAA TGGCACGAACTGGAATACCTTCGACACGGGTTTGACTGGCTGGGTTCATAATGTAACCGTTATGGATGGTGAACTCTATG CACTCCATCGGCCAACTGATAGTTCAGGCTATGAGCATCTGCATTGGGATGGGAGTGAATGGATCTTCTTAGCTGATCTT GGTTCAATGGATTATTCTTGGCTATTTTCCCCAAGAGCTGTATTTGTACAGTATAAGCAAGAGTTATTGCTGGTTGGTGA AATTAGCTATTATAGTAGTGCCGTTGAACCAACCAGCCAAGGTGATTCAACCTTACGTTGGAATGGCACAGAGTGGGAAC CAATGAATTCCCATGGCTTATTGACCCGAATGGCAACTGCGATTGCCACAGTTGATGAAAATCTTTTGGTGGCATCGAGT AACTTTTACTGGAGCCAAGGTGTTGCTTCGCTAGCCCAATTTGGCAGCAATCAGCATTGGCAGAAGCTCGTTGATCGGCG ATCTACTTCAGACCCGGTGCAAGCACTCGAAGCCTTTCAACAAAGCCATTTTATGGTTAGTTACTATACGCTGTACGAAG CTGCTAGCACCACCTGGAACCAAATTGGCGCGTTCCGTGTGGTTCGTGCAATTGCCCAATCCAATAACAAATTGTATGTT GCTGGTGATTTTGAGCAATTCAATGGGGTCACGGCGCATAATTTGGTGACTTGGGATGGCACGCAATGGCAAGCCTTAAA TGCGCCAGCCTCATTCGATCAAGTGGTGCTAATTGAGGCCCATGGCAATCATGTGTATATCAGCGATGGCTTTCAATTGG CTCGCTGGGATGGCACGCAGTGGACAACCCTCGCCACCAATGTGGTCAATATTGGTTCAATTGAAGCAACTACCAATGGG GTCTATATCGCTGGCACCTTTAGCAGTGTTGGCGGCGTGACAGCCCCCAAAATCGCCTATTGGAATGGCACGGCTTGGTC GGGCTTGAGTGGGGTGATTAGTGGTTCAATTCTTGATCTGGAAATGGGAGCCGATGGCCTATATGTGGCAGGCAACTTTT TCGGTTTGAACAATGGCATCGTTAGCCCAGGGATTCTGCGCTGGGATGGGTCGGCATGGCATGGAGTTGGCGGTGGTGTT CAGACGTATCGATCGTTTGGTATAGTGAACAATGGGACGGTTCAGCGCTTAGCCGCCACTCCGACCCGTATGTTTATGTA TGGTGACTTCAATCGGGTTGGCAACCAATATGAGTCGTATACTTTGGCCGTGTGGGAATATGGTGACGAACCATTGATCA AAGCCAAACCTGATTATGCGTTTACCAATCGCCCTCAAGCGGTTACGGTCAATGTTTTAGCCAATGATTGGAGCTACCAT CCATCTCAATTGCAACTGGTGAATCTCACAGCGCCAAGCCATGGCACGGCTGTGATTAGCGGTAATTCGGTGGTCTACAC ACCGTATCCTCAATTTACCGGGATTGATACTCTGACCTATACCGTGCGCGATCCAATCAATGCCGTAACAACCACAGCTC AATTACGGCTCTATGTTTGGAATACCCCCAATGTTGTTTTGAATGAGCTGTATTTACCAGCAGTTATCCGATAA
Upstream 100 bases:
>100_bases TATCACTTATTCTTGCCCTATACCATCAAATAAACGATTAAATCAGCGGTAATCGCGCATCGATTGCCGCTCCCCAATCT AGCTTTGAGAGGAAGTTCCC
Downstream 100 bases:
>100_bases TATTGATCTAGGTGTTGGCCTAAAATGCTAGCACCTGTCCATAGTTAGTTGAGGGCAAGAGAAAACATTATGCGAAAATT ATTTCGGCGCTTAGGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 797; Mature: 796
Protein sequence:
>797_residues MSRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPLRPIEWNGTLYAILNGHRNFE SGVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIAGKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGS EALLIDDQAYGSLARWDGEQWHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLK WANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTDSSGYEHLHWDGSEWIFLADL GSMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQGDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASS NFYWSQGVASLAQFGSNQHWQKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYV AGDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQWTTLATNVVNIGSIEATTNG VYIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDLEMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGV QTYRSFGIVNNGTVQRLAATPTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYH PSQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVWNTPNVVLNELYLPAVIR
Sequences:
>Translated_797_residues MSRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPLRPIEWNGTLYAILNGHRNFE SGVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIAGKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGS EALLIDDQAYGSLARWDGEQWHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLK WANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTDSSGYEHLHWDGSEWIFLADL GSMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQGDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASS NFYWSQGVASLAQFGSNQHWQKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYV AGDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQWTTLATNVVNIGSIEATTNG VYIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDLEMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGV QTYRSFGIVNNGTVQRLAATPTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYH PSQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVWNTPNVVLNELYLPAVIR >Mature_796_residues SRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPLRPIEWNGTLYAILNGHRNFES GVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIAGKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGSE ALLIDDQAYGSLARWDGEQWHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLKW ANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTDSSGYEHLHWDGSEWIFLADLG SMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQGDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASSN FYWSQGVASLAQFGSNQHWQKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYVA GDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQWTTLATNVVNIGSIEATTNGV YIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDLEMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGVQ TYRSFGIVNNGTVQRLAATPTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYHP SQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVWNTPNVVLNELYLPAVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87894; Mature: 87763
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPL CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC RPIEWNGTLYAILNGHRNFESGVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIA CEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEEEEEE GKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGSEALLIDDQAYGSLARWDGEQ CCCEEEEEECCCEEEECCEEEECCCCEEEEECCCEEEECCEEEEEECCCCCCHHHCCCCH WHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLK HHHHHCCCCEEEEEEECCCCCEEECCEEEECCCEEEEEEECCCEEEEECCCEEEEEEEEE WANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTD ECCCEEEEECCCHHHHCCCHHHEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCC SSGYEHLHWDGSEWIFLADLGSMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQ CCCCEEEEECCCCEEEEEECCCCCEEEEECCCEEEEEEECEEEEEEEEHHHHCCCCCCCC GDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASSNFYWSQGVASLAQFGSNQHW CCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHH QKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYV HHHHHCCCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEE AGDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQ EECHHHHCCEEEHEEEEECCCCEEEECCCCCCCEEEEEEECCCEEEEECCEEEEEECCCE WTTLATNVVNIGSIEATTNGVYIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDL EEEEEECEEEECEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEE EMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGVQTYRSFGIVNNGTVQRLAAT EECCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC PTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYH CEEEEEEECHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCC PSQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVW CCEEEEEEEECCCCCEEEEECCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEE NTPNVVLNELYLPAVIR CCCCCEEHHCCCCEECC >Mature Secondary Structure SRSSKLISIVTLFLIMLSAITKPSAPVAAVEPQIPSSPGTWSQDFGLYIKTAANSYTPL CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC RPIEWNGTLYAILNGHRNFESGVGYWNDQQWLKIDGLNGQVDVLTVHQNRLYVAGRFTIA CEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCEEEEEEEEEEE GKNLNLAYWDGNLWTAMPMHVVQDGPFLLASYANQLYLGSEALLIDDQAYGSLARWDGEQ CCCEEEEEECCCEEEECCEEEECCCCEEEEECCCEEEECCEEEEEECCCCCCHHHCCCCH WHAAAAGIEGVVFTMLSRPDGLYLGGSFLYNGQATSLLYWNGSQWQTVGGGVYGHVVDLK HHHHHCCCCEEEEEEECCCCCEEECCEEEECCCEEEEEEECCCEEEEECCCEEEEEEEEE WANNQLYISGNFTSTLVPSMRNVAAWNGTNWNTFDTGLTGWVHNVTVMDGELYALHRPTD ECCCEEEEECCCHHHHCCCHHHEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCC SSGYEHLHWDGSEWIFLADLGSMDYSWLFSPRAVFVQYKQELLLVGEISYYSSAVEPTSQ CCCCEEEEECCCCEEEEEECCCCCEEEEECCCEEEEEEECEEEEEEEEHHHHCCCCCCCC GDSTLRWNGTEWEPMNSHGLLTRMATAIATVDENLLVASSNFYWSQGVASLAQFGSNQHW CCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHH QKLVDRRSTSDPVQALEAFQQSHFMVSYYTLYEAASTTWNQIGAFRVVRAIAQSNNKLYV HHHHHCCCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEE AGDFEQFNGVTAHNLVTWDGTQWQALNAPASFDQVVLIEAHGNHVYISDGFQLARWDGTQ EECHHHHCCEEEHEEEEECCCCEEEECCCCCCCEEEEEEECCCEEEEECCEEEEEECCCE WTTLATNVVNIGSIEATTNGVYIAGTFSSVGGVTAPKIAYWNGTAWSGLSGVISGSILDL EEEEEECEEEECEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCHHHCCEEEEE EMGADGLYVAGNFFGLNNGIVSPGILRWDGSAWHGVGGGVQTYRSFGIVNNGTVQRLAAT EECCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC PTRMFMYGDFNRVGNQYESYTLAVWEYGDEPLIKAKPDYAFTNRPQAVTVNVLANDWSYH CEEEEEEECHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCC PSQLQLVNLTAPSHGTAVISGNSVVYTPYPQFTGIDTLTYTVRDPINAVTTTAQLRLYVW CCEEEEEEEECCCCCEEEEECCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEE NTPNVVLNELYLPAVIR CCCCCEEHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA