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The map label for this gene is chbR [C]

Identifier: 159899017

GI number: 159899017

Start: 3192485

End: 3193222

Strand: Reverse

Name: chbR [C]

Synonym: Haur_2498

Alternate gene names: 159899017

Gene position: 3193222-3192485 (Counterclockwise)

Preceding gene: 159899030

Following gene: 159899015

Centisome position: 50.31

GC content: 49.46

Gene sequence:

>738_bases
ATGCAGCATGCGGATTTTTGCACAATTGAATATCCAGATGTGAGCCAACTTGTGTCGTTGTTTGATCTTTTGCCTGATGT
GGTGTTTTTTTGCAAGGATCATGCGGGGCGGTATCAGGTAGTTAATGAAACCTTGCGGGTGCGTTGTGGTTGTCGTAGCA
AGCAAGAATTAATTGGGCGTTTGCCCGAAGAAGTGTTTCCATTGGAGTTGGGGGCCAGCTATGCCAGCCAAGATCAGCAG
GTGATTCGCTCTGGAGTTGCGCTGAATCATCGTTTGGAAGTGCATATTTACCCTGATTTGCGGATAGGTTGGTGTGTGAC
TCACAAGCGCCCGTTGCGCGACCGTAACGGCGTTGTTACGGGCTTGGTTGGTATTTCGCGCGATTTGCGCAGCCCCAATC
GCAATGCCCCAACATGGCGGCGCGTGGCTAGCTCAGTCGAATATTTAACCGAGCATTTTGCTGAAATTGCCACAATTCAA
CAATTGGCAACCATTGCCCAGCTTTCGTTGAGCCAATATGAACGGGCAATTCAACAGATTTTTGAATTAACCCCCAAGCA
ATTGCTGATTAAAACCCGAATTGATGCCAGTATCAAGCTGCTGGCGGGCAATCGCTCGATTGCAGCGATTGCGGCCACCT
GTGGCTATGCTGATCATAGTGCTTTTTCACGCCAATTTCGGCTGATTACGGGTCTGACCCCTCGCCAATATCGCCATTTG
CTAGGCCGTGATACTTGA

Upstream 100 bases:

>100_bases
CCCTCTGCGCCTCTGCGTTAAAAATTGCCTGGCCCCTGATTCGTAGCCACTGACCACTACAATAGCGCGTTTGGGGTGAT
TTGTCTTGTACAATTAGGCT

Downstream 100 bases:

>100_bases
ACGATAGTAATTCAGGGTCTTGATGCATTCCAAAAGCTCGTTGATTGGTACTTGCTGCTCAAGACCTTGGGGCACAAATC
GAAAGACAGCGGTGATTGAG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Regulator With PAS/PAC Sensors AraC Family; Transcription Regulator; Transcriptional Regulator AraC; PAS Fold-4 Domain Protein; PAS Sensor Protein; AraC/XylS Family Transcriptional Regulator; GGEF/EAL/PAS/PAC-Domain-Containing Protein; Proline Utilization Regulator; Regulatory Protein; Transcriptional Regulator Protein AraC Family; Transcriptional Regulator Transcription Regulator Protein; PAS Fold Family Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MQHADFCTIEYPDVSQLVSLFDLLPDVVFFCKDHAGRYQVVNETLRVRCGCRSKQELIGRLPEEVFPLELGASYASQDQQ
VIRSGVALNHRLEVHIYPDLRIGWCVTHKRPLRDRNGVVTGLVGISRDLRSPNRNAPTWRRVASSVEYLTEHFAEIATIQ
QLATIAQLSLSQYERAIQQIFELTPKQLLIKTRIDASIKLLAGNRSIAAIAATCGYADHSAFSRQFRLITGLTPRQYRHL
LGRDT

Sequences:

>Translated_245_residues
MQHADFCTIEYPDVSQLVSLFDLLPDVVFFCKDHAGRYQVVNETLRVRCGCRSKQELIGRLPEEVFPLELGASYASQDQQ
VIRSGVALNHRLEVHIYPDLRIGWCVTHKRPLRDRNGVVTGLVGISRDLRSPNRNAPTWRRVASSVEYLTEHFAEIATIQ
QLATIAQLSLSQYERAIQQIFELTPKQLLIKTRIDASIKLLAGNRSIAAIAATCGYADHSAFSRQFRLITGLTPRQYRHL
LGRDT
>Mature_245_residues
MQHADFCTIEYPDVSQLVSLFDLLPDVVFFCKDHAGRYQVVNETLRVRCGCRSKQELIGRLPEEVFPLELGASYASQDQQ
VIRSGVALNHRLEVHIYPDLRIGWCVTHKRPLRDRNGVVTGLVGISRDLRSPNRNAPTWRRVASSVEYLTEHFAEIATIQ
QLATIAQLSLSQYERAIQQIFELTPKQLLIKTRIDASIKLLAGNRSIAAIAATCGYADHSAFSRQFRLITGLTPRQYRHL
LGRDT

Specific function: Repressor For The Chbbcarfg Operon (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27771; Mature: 27771

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHADFCTIEYPDVSQLVSLFDLLPDVVFFCKDHAGRYQVVNETLRVRCGCRSKQELIGR
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH
LPEEVFPLELGASYASQDQQVIRSGVALNHRLEVHIYPDLRIGWCVTHKRPLRDRNGVVT
CCHHHCCHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEE
GLVGISRDLRSPNRNAPTWRRVASSVEYLTEHFAEIATIQQLATIAQLSLSQYERAIQQI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FELTPKQLLIKTRIDASIKLLAGNRSIAAIAATCGYADHSAFSRQFRLITGLTPRQYRHL
HHCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
LGRDT
HCCCC
>Mature Secondary Structure
MQHADFCTIEYPDVSQLVSLFDLLPDVVFFCKDHAGRYQVVNETLRVRCGCRSKQELIGR
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH
LPEEVFPLELGASYASQDQQVIRSGVALNHRLEVHIYPDLRIGWCVTHKRPLRDRNGVVT
CCHHHCCHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEE
GLVGISRDLRSPNRNAPTWRRVASSVEYLTEHFAEIATIQQLATIAQLSLSQYERAIQQI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FELTPKQLLIKTRIDASIKLLAGNRSIAAIAATCGYADHSAFSRQFRLITGLTPRQYRHL
HHCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
LGRDT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA