Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898890

Identifier: 159898890

GI number: 159898890

Start: 3017222

End: 3017488

Strand: Reverse

Name: 159898890

Synonym: Haur_2369

Alternate gene names: NA

Gene position: 3017488-3017222 (Counterclockwise)

Preceding gene: 159898891

Following gene: 159898888

Centisome position: 47.55

GC content: 36.7

Gene sequence:

>267_bases
ATGGTATTGCCAGCATATGCTTTAGAATTTAGCCCAACTAATTTTTTGGAACAGCTATTTGAACTGCTTTTAACTGTTGG
TAATCGAGAATTTTATTTTGAGCAATTTGAAATTTGTGAATATGGTGAGCTTCCTTCTGCATGTCCACATGAATTACTGG
TCTTTCAACTAGTCGTTAGGGCCACCGAATTTCCCCGTGGTGAATGGATACATATTTTTTGCAATGATCGTTTTCAAATC
CTTGGTATTCGGTTCGAGCTAGATTAA

Upstream 100 bases:

>100_bases
ATATCTTTGGCATAATCAAATAAACCCCGATCCTTGTCTGGATGGTGCTTGTCAAGCGCAGATTAGTGCCTATTTTAAGA
ATTTAGATTTGTGTAATCGT

Downstream 100 bases:

>100_bases
TAATCCAACGTTATGATGGGTCGAGGTGCAGAATCAGCCGTTACGTTTTGATCCACGAAGGACATGAAGGGCACGAAGAA
GAGCGAGGGGTCAGGATTCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MVLPAYALEFSPTNFLEQLFELLLTVGNREFYFEQFEICEYGELPSACPHELLVFQLVVRATEFPRGEWIHIFCNDRFQI
LGIRFELD

Sequences:

>Translated_88_residues
MVLPAYALEFSPTNFLEQLFELLLTVGNREFYFEQFEICEYGELPSACPHELLVFQLVVRATEFPRGEWIHIFCNDRFQI
LGIRFELD
>Mature_88_residues
MVLPAYALEFSPTNFLEQLFELLLTVGNREFYFEQFEICEYGELPSACPHELLVFQLVVRATEFPRGEWIHIFCNDRFQI
LGIRFELD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10451; Mature: 10451

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPAYALEFSPTNFLEQLFELLLTVGNREFYFEQFEICEYGELPSACPHELLVFQLVVR
CCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEHCCCCCCCCCCCCCHHHHHHHHHHHH
ATEFPRGEWIHIFCNDRFQILGIRFELD
HHCCCCCCEEEEEECCCEEEEEEEEECC
>Mature Secondary Structure
MVLPAYALEFSPTNFLEQLFELLLTVGNREFYFEQFEICEYGELPSACPHELLVFQLVVR
CCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEHCCCCCCCCCCCCCHHHHHHHHHHHH
ATEFPRGEWIHIFCNDRFQILGIRFELD
HHCCCCCCEEEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA