| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is eutB [H]
Identifier: 159898781
GI number: 159898781
Start: 2891026
End: 2892417
Strand: Reverse
Name: eutB [H]
Synonym: Haur_2260
Alternate gene names: 159898781
Gene position: 2892417-2891026 (Counterclockwise)
Preceding gene: 159898784
Following gene: 159898780
Centisome position: 45.57
GC content: 52.23
Gene sequence:
>1392_bases ATGACCAGCTATCAGCATTCAATTCGCCAACGCCAGTATCAATTTGATTCGCTCAAAACTCTCTTGGCTAAGGCTACGCC TGAACGTTCGGGCGATGCTTTGGCGGGCTTAATCGCCGCTAGTGCTGAGGAACGAGTGGCGGCGCAGTGGTGTTTGGCTG ATGTTCCCCTAACGACCTTTCTCAACGAAGTCGTCATCCCCTATGAAACCGATGAAGTAACACGCTTGATCATCGATAGC CATGATCAGGCAGCGTTTGCACCAATTCGCCATTTGACGGTTGGTGGTTTGCGCGAGTGGTTGCTCGATTATCGCACTGA TAGCCAGCAATTGGCGGCGGTTGCCGCAGGCATTACGCCCGAAATGGCGGCGGCAGTTTCCAAAATTATGCGCAACCAAG ATTTGATTGCGGTTGCCAAAAAGTGCCAAGTGATTACGCGCTTTCGTAATACCTTGGGCTTGGCGGGGCGTTTTTCCTCA CGCTTGCAACCCAATCATCCAACCGATGATCCCCAAGGCATTGCAGCGGCAATTTTCGATGGCTTGTTGTATGGCTGTGG CGATGCGGTGATTGGGATCAATCCAGCGACCGATAGCCCGCAAGCTATGACCAGTTTGCTGCATTTAATTGATGAATTAC GTCAGCGCTATGCCATGCCGGTGCAATCGTGTGTGTTGGCTCATGTCACCACCGCCTTGCAGGTGATCGAGCTCGGTGCT CCAGTCGATTTAGTGTTTCAATCGATTGCCGGGACCGAGGCGGCCAATCGTAGTTTTGGCATCGATTTGGCGCTGTTGCA CGAAGCCAATCAAGCAGCACGCGGCTTGCAGCGTGGCACAATTGGCAATAATGTGATGTATTTTGAAACTGGCCAAGGCA GCGCACTTTCAGCTAATGCCCATCATGGCGTTGATCAACAGACCTGCGAGGCGCGTGCTTATGCGGTAGCGCGAGCCTTT GAGCCATTGCTGCTCAACACCGTTGTGGGTTTTATCGGCCCTGAATATCTCTACGATGGCAAGCAAATTACCCGAGCGGC CTTAGAAGATCATTTTTGTGGCAAATTGTTGGGCCTGCCGATGGGCTGCGATGCCTGCTATACCAACCATGCCGAGGCTG ATCAAAACGATATTGATAATTTGCTGGTGCTGCTGGCCAGCGCTGGTTGCACCTATGTGATGGGCGTGCCTGGCGCTGAC GATATTATGCTCAATTATCAAAGCAGCTCATATCACGATATTCGTTTTGTGCAAACAACCTTGGGTTTGCGCCCAGCCCC CGAGTTTGAAGCATGGCTGCAACAGCTTGGCATTAGCGATCAAGCAGGCCGTTTGATTGCCAACGAGCGCCATCGTTTGT TGCAATCAGCCGCCCAGTTGGGAGCATTGTAA
Upstream 100 bases:
>100_bases GTCAAATCGAATGTTGTTGTTCTTTGTGGCTTGCGCTCTGATTGCAATGCGCTAGAAACAATGCCATAATTGGCAATGCT TGTGCTGTGGGAGACTGCCT
Downstream 100 bases:
>100_bases TGGCCGAACAATCTGAAAATGAGCTTTGGCAACGCTTGCGCCAATTTACAAATGCGCGGATTGGCATTGGTCGAGTGGGC GATGCGCTGCCAACCAAGGC
Product: ethanolamine ammonia lyase large subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MTSYQHSIRQRQYQFDSLKTLLAKATPERSGDALAGLIAASAEERVAAQWCLADVPLTTFLNEVVIPYETDEVTRLIIDS HDQAAFAPIRHLTVGGLREWLLDYRTDSQQLAAVAAGITPEMAAAVSKIMRNQDLIAVAKKCQVITRFRNTLGLAGRFSS RLQPNHPTDDPQGIAAAIFDGLLYGCGDAVIGINPATDSPQAMTSLLHLIDELRQRYAMPVQSCVLAHVTTALQVIELGA PVDLVFQSIAGTEAANRSFGIDLALLHEANQAARGLQRGTIGNNVMYFETGQGSALSANAHHGVDQQTCEARAYAVARAF EPLLLNTVVGFIGPEYLYDGKQITRAALEDHFCGKLLGLPMGCDACYTNHAEADQNDIDNLLVLLASAGCTYVMGVPGAD DIMLNYQSSSYHDIRFVQTTLGLRPAPEFEAWLQQLGISDQAGRLIANERHRLLQSAAQLGAL
Sequences:
>Translated_463_residues MTSYQHSIRQRQYQFDSLKTLLAKATPERSGDALAGLIAASAEERVAAQWCLADVPLTTFLNEVVIPYETDEVTRLIIDS HDQAAFAPIRHLTVGGLREWLLDYRTDSQQLAAVAAGITPEMAAAVSKIMRNQDLIAVAKKCQVITRFRNTLGLAGRFSS RLQPNHPTDDPQGIAAAIFDGLLYGCGDAVIGINPATDSPQAMTSLLHLIDELRQRYAMPVQSCVLAHVTTALQVIELGA PVDLVFQSIAGTEAANRSFGIDLALLHEANQAARGLQRGTIGNNVMYFETGQGSALSANAHHGVDQQTCEARAYAVARAF EPLLLNTVVGFIGPEYLYDGKQITRAALEDHFCGKLLGLPMGCDACYTNHAEADQNDIDNLLVLLASAGCTYVMGVPGAD DIMLNYQSSSYHDIRFVQTTLGLRPAPEFEAWLQQLGISDQAGRLIANERHRLLQSAAQLGAL >Mature_462_residues TSYQHSIRQRQYQFDSLKTLLAKATPERSGDALAGLIAASAEERVAAQWCLADVPLTTFLNEVVIPYETDEVTRLIIDSH DQAAFAPIRHLTVGGLREWLLDYRTDSQQLAAVAAGITPEMAAAVSKIMRNQDLIAVAKKCQVITRFRNTLGLAGRFSSR LQPNHPTDDPQGIAAAIFDGLLYGCGDAVIGINPATDSPQAMTSLLHLIDELRQRYAMPVQSCVLAHVTTALQVIELGAP VDLVFQSIAGTEAANRSFGIDLALLHEANQAARGLQRGTIGNNVMYFETGQGSALSANAHHGVDQQTCEARAYAVARAFE PLLLNTVVGFIGPEYLYDGKQITRAALEDHFCGKLLGLPMGCDACYTNHAEADQNDIDNLLVLLASAGCTYVMGVPGADD IMLNYQSSSYHDIRFVQTTLGLRPAPEFEAWLQQLGISDQAGRLIANERHRLLQSAAQLGAL
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=426, Percent_Identity=52.3474178403756, Blast_Score=455, Evalue=1e-129,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 50146; Mature: 50014
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSYQHSIRQRQYQFDSLKTLLAKATPERSGDALAGLIAASAEERVAAQWCLADVPLTTF CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LNEVVIPYETDEVTRLIIDSHDQAAFAPIRHLTVGGLREWLLDYRTDSQQLAAVAAGITP HHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH EMAAAVSKIMRNQDLIAVAKKCQVITRFRNTLGLAGRFSSRLQPNHPTDDPQGIAAAIFD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH GLLYGCGDAVIGINPATDSPQAMTSLLHLIDELRQRYAMPVQSCVLAHVTTALQVIELGA HHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PVDLVFQSIAGTEAANRSFGIDLALLHEANQAARGLQRGTIGNNVMYFETGQGSALSANA CHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCC HHGVDQQTCEARAYAVARAFEPLLLNTVVGFIGPEYLYDGKQITRAALEDHFCGKLLGLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHCCC MGCDACYTNHAEADQNDIDNLLVLLASAGCTYVMGVPGADDIMLNYQSSSYHDIRFVQTT CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCHHEEHHHH LGLRPAPEFEAWLQQLGISDQAGRLIANERHRLLQSAAQLGAL HCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSYQHSIRQRQYQFDSLKTLLAKATPERSGDALAGLIAASAEERVAAQWCLADVPLTTF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LNEVVIPYETDEVTRLIIDSHDQAAFAPIRHLTVGGLREWLLDYRTDSQQLAAVAAGITP HHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH EMAAAVSKIMRNQDLIAVAKKCQVITRFRNTLGLAGRFSSRLQPNHPTDDPQGIAAAIFD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH GLLYGCGDAVIGINPATDSPQAMTSLLHLIDELRQRYAMPVQSCVLAHVTTALQVIELGA HHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PVDLVFQSIAGTEAANRSFGIDLALLHEANQAARGLQRGTIGNNVMYFETGQGSALSANA CHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCC HHGVDQQTCEARAYAVARAFEPLLLNTVVGFIGPEYLYDGKQITRAALEDHFCGKLLGLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHCCC MGCDACYTNHAEADQNDIDNLLVLLASAGCTYVMGVPGADDIMLNYQSSSYHDIRFVQTT CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCHHEEHHHH LGLRPAPEFEAWLQQLGISDQAGRLIANERHRLLQSAAQLGAL HCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]