| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is eutC [H]
Identifier: 159898780
GI number: 159898780
Start: 2890253
End: 2891026
Strand: Reverse
Name: eutC [H]
Synonym: Haur_2259
Alternate gene names: 159898780
Gene position: 2891026-2890253 (Counterclockwise)
Preceding gene: 159898781
Following gene: 159898779
Centisome position: 45.55
GC content: 52.97
Gene sequence:
>774_bases ATGGCCGAACAATCTGAAAATGAGCTTTGGCAACGCTTGCGCCAATTTACAAATGCGCGGATTGGCATTGGTCGAGTGGG CGATGCGCTGCCAACCAAGGCCAATTTGGCGTTTCAACAAGACCATGCCTTAGCCCGTGATGCAGTCCATGCCCAGGTCG ATTTTGCGGCGATTGCCAGCGCGTTACAACCTGAATTTCCCCAAATACTCAGGCTCAAAAGTGCCGCTTTGGATCGGGCG ACCTATCTCAAGCGACCAGATTTAGGCCGCAGCTTGCATGTTGAATCGCGTCTGCAACTAGAGGCCTTGCAAACTGATCC ATGCATTGTAGCCTTGGTGGTAGCCGATGGCTTGTCGGCGGTGGCGATTGAACGTCATGCTGTACCGCTGCTGAACATAA TCAAACCGCAACTTGAGTCGCTTGGTTGGTCGCTAGCGCCGTTGGTGCTGGTTGAACAAGGGCGGGTGGCAATTGGCGAT GAAATTGGCGAATTGCTCAAGGCCGAGTTAGTGGTGATATTAATTGGTGAGCGACCTGGCTTGAGCGTTGCCGATAGTTT GGGCATCTATTTAACTTATGCGCCGCAGCGAGGCCGCAACGATGCTGAGCGCAACTGCATCTCCAACATTCACCCCCAAG GCTTGAGTTATGTAGCAGCTAGCGATTTATTGATGTATTTGTTGGGGCAGGCTCGTCAACGGCGTTTGACCGGAGTCGCC CTCAAGGACGAGCGCCAGCAACTTGGCGCAACCAATAATCCCACGCTTGAATAA
Upstream 100 bases:
>100_bases CATGGCTGCAACAGCTTGGCATTAGCGATCAAGCAGGCCGTTTGATTGCCAACGAGCGCCATCGTTTGTTGCAATCAGCC GCCCAGTTGGGAGCATTGTA
Downstream 100 bases:
>100_bases TAAACTTGGTAGAAAATGTCAAGTTTTATCGGCTGTGCTTTGCTAGGCTACTGCTATCGGATTGATGGCTAGTAGGAGCA AATGCAATGCTACGGCGTAA
Product: ethanolamine ammonia-lyase
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MAEQSENELWQRLRQFTNARIGIGRVGDALPTKANLAFQQDHALARDAVHAQVDFAAIASALQPEFPQILRLKSAALDRA TYLKRPDLGRSLHVESRLQLEALQTDPCIVALVVADGLSAVAIERHAVPLLNIIKPQLESLGWSLAPLVLVEQGRVAIGD EIGELLKAELVVILIGERPGLSVADSLGIYLTYAPQRGRNDAERNCISNIHPQGLSYVAASDLLMYLLGQARQRRLTGVA LKDERQQLGATNNPTLE
Sequences:
>Translated_257_residues MAEQSENELWQRLRQFTNARIGIGRVGDALPTKANLAFQQDHALARDAVHAQVDFAAIASALQPEFPQILRLKSAALDRA TYLKRPDLGRSLHVESRLQLEALQTDPCIVALVVADGLSAVAIERHAVPLLNIIKPQLESLGWSLAPLVLVEQGRVAIGD EIGELLKAELVVILIGERPGLSVADSLGIYLTYAPQRGRNDAERNCISNIHPQGLSYVAASDLLMYLLGQARQRRLTGVA LKDERQQLGATNNPTLE >Mature_256_residues AEQSENELWQRLRQFTNARIGIGRVGDALPTKANLAFQQDHALARDAVHAQVDFAAIASALQPEFPQILRLKSAALDRAT YLKRPDLGRSLHVESRLQLEALQTDPCIVALVVADGLSAVAIERHAVPLLNIIKPQLESLGWSLAPLVLVEQGRVAIGDE IGELLKAELVVILIGERPGLSVADSLGIYLTYAPQRGRNDAERNCISNIHPQGLSYVAASDLLMYLLGQARQRRLTGVAL KDERQQLGATNNPTLE
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family [H]
Homologues:
Organism=Escherichia coli, GI1788781, Length=239, Percent_Identity=33.8912133891213, Blast_Score=122, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009246 [H]
Pfam domain/function: PF05985 EutC [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 28069; Mature: 27937
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQSENELWQRLRQFTNARIGIGRVGDALPTKANLAFQQDHALARDAVHAQVDFAAIAS CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH ALQPEFPQILRLKSAALDRATYLKRPDLGRSLHVESRLQLEALQTDPCIVALVVADGLSA HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHCCCCCEEEEEEECCCCHH VAIERHAVPLLNIIKPQLESLGWSLAPLVLVEQGRVAIGDEIGELLKAELVVILIGERPG HHHHHHCCHHHHHHHHHHHHCCCCHHHHEEEECCCEEEHHHHHHHHHHCEEEEEECCCCC LSVADSLGIYLTYAPQRGRNDAERNCISNIHPQGLSYVAASDLLMYLLGQARQRRLTGVA CCHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCE LKDERQQLGATNNPTLE EHHHHHHCCCCCCCCCC >Mature Secondary Structure AEQSENELWQRLRQFTNARIGIGRVGDALPTKANLAFQQDHALARDAVHAQVDFAAIAS CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH ALQPEFPQILRLKSAALDRATYLKRPDLGRSLHVESRLQLEALQTDPCIVALVVADGLSA HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHCCCCCEEEEEEECCCCHH VAIERHAVPLLNIIKPQLESLGWSLAPLVLVEQGRVAIGDEIGELLKAELVVILIGERPG HHHHHHCCHHHHHHHHHHHHCCCCHHHHEEEECCCEEEHHHHHHHHHHCEEEEEECCCCC LSVADSLGIYLTYAPQRGRNDAERNCISNIHPQGLSYVAASDLLMYLLGQARQRRLTGVA CCHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCE LKDERQQLGATNNPTLE EHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]