Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898772

Identifier: 159898772

GI number: 159898772

Start: 2869224

End: 2871887

Strand: Reverse

Name: 159898772

Synonym: Haur_2251

Alternate gene names: NA

Gene position: 2871887-2869224 (Counterclockwise)

Preceding gene: 159898773

Following gene: 159898771

Centisome position: 45.25

GC content: 53.6

Gene sequence:

>2664_bases
ATGCGCTTGAAGCCTGTTCAGCTTCTTATTATGACGTTCCTGCTTTTGACCATGGCTCAGACTGGTGCGAGATTTCGTGC
CTACGCGCGGTTTGACGCTCCAGTTCAATCAATCCTTGCTGGTGAATCGCGTGGTAGCACCCAAATTGGGGCAGCTGGCA
TCCAACGCACCAGCGCTGCAATTATGGCCAGCCAAGCCTTAGCCGATCAACAACCGCAGCCAGTACGTATAGCAAAACCA
CGCTTTCAGCTTGATCGCCAGCGTTTAGCTGAAAATCCCAATGCTCCAGCGGTTACCCAATGGCCGACTCAAGCAGATAC
TTCCCCAGTTGGAGCATCGAATGCCACGGCCTTGAGCAGTTTGAGCACTACTTTTACCGGTGCAACCTTGGCTGATACTA
ATCGAATTCCGCCGGGCACCATGGGCACGGTTGGGCCAGGCCAATTTGTGGTGGCAATTAATGGCCGCTTGCGAACCTTC
AATAAAGCGACGGGTGTTGCTGATGGCGTGATCGATAGTACGCTGGAAACGTTTTTTAGTTCGGTGATGACCCCACCGAT
TGCCAATAACATCACCAACGATCCACGGATTCGCTATGATCGAATGACCCAGCGCTGGTTTCTGACGGTCACCGATCTGC
CAGGCCTTTCGGGCAATCAAGTCAATCGGCTGTTGCTGGCGGTTAGCGATGCTGCCAGTGCGGGAGTTATTACGCCTAGC
ACGGTCTGGACATTCTACTTTTTTCAAGGCAGCAACACCGATGTGATGGATTATGCGAGCTTAGGCGTTGATGTTAATGC
CTTGTATATTGGCGCTAACATGTTCACCACCGCTGGTGCCTTTGTTGGCACCAATGGTTATGTGGTGCAAAAAAGCTCGA
TCCTTGGGGCTGGGCCAATGGTGGTAACCACCTTTGCTGGGTTAGTGGCAGGTGGGACTGGCGCTGGCCCATTTGCCCCA
CAAGGGGTTGATAATTTTGACCCAACTGCAACCGCAGGCTACTTTGTGGGGGTTGATAATGCCACATTTAGCACAATCAT
GTTTCGGAGGGTGAGCAATCCAGGCAGTATGACCCCCACGATTTCGGCCAATATCGCGGTGACCGTACCCACCACGACCT
TTCCTACCCGCGTTCCCCACCTAGGCAATACTGGGGGGGCGAACGGTCAACTCGATGGCATTGATGATCGCTTGTATTCA
GCCATGATTCGTAATGGTCGGCTGTGGACGGCGCACAGCTTCAGAACCAATGCCGCTGGGGTTGCAAGCACCGCAACCGG
GGCACGTAACTCTGTGCGTTGGTACGAGTTTCAGAATCTTGATACGACACCAACCTTGCGCCAAGCGGGAACGGTGTTTG
ATAATGCTGCTGCCAACCCGCTCTTTCAATGGATTCCAAGCGTTGCTGTTTCAGGCCAAGGCCACGCTGTGATGGGCTTC
AGTAGTGCCGGAGCCACAGCCCGCGCCAATGCATCCATGACCAGCCGCTTGGCTGGCGATACTCTTGGAACAATGCAAGC
GCCGACGCTCTATACGGCGAGCAGCTTTGATTACAATCCCGCCGCTGATCCTGGTGGGGCGGCTGGGCGACTTTGGGGCA
CTACCTCCTATACGAGCCTCGACCCCAGCGATGATATGACCATGTGGACGATTCAGCAGTTTACCAATGCCACCGATTCG
TATGGGGTGCAGGTTGTCAAAGTACTAGCTCCGCCGCCAGCAACCCCTACTACCAGTAATCCAGCCTCGGTCGATCAGGG
AACGACGACGGATATCATCATTACTGGTACTTCGAGCGCTGGCTCGGGCTTTTATGATCCTGGGGCAGGGTTTAGCAACC
GAATTACTGCCAGCATCAATGGTGGCGGGGTAACAGTAAATAGTGTTACCTACAACAGCCCAACCCAAATTACCCTCAAC
ATCACGGTTGCACCTGGAGCTAGTGCTGGTGCACGCATTGTGACGGTAACTAACCCAGATGGTCAGAGCCTTGACAGCAC
CAGCGGGATTGTAACGATCGTTGCAGCCGCGACGGCCACTCCAACCAACACACCGACGAATACACCAACCAACACGCCAA
CTAATACCGCGACGAATACACCAACCAACACGCCGACCAATACACCAACCAATACCGCGACAGCAACGGTTAGCAACACA
CCAACCAATACGCCAACCAATACCGCGACAGCAACGGTTAGTAACACACCAACGAATACGCCGACTGGTACACCAACCAA
CACGCCTGTGCCCACAACATTTATTCGATATTTGCCCTTTGTAACCATGAGCCGACTTGGCTCAATTGCGACCCTCGGAT
CAGCTGCGATACCGACTAACCCAATCGCAACCCCAGGCCTCGTCTTTTTTACCGGTACAATCAGTCTACCGACAGTGCTA
CCAAGTGGTGGAACGTATTGGCTTTCATCAAGCCCGAGCAGCCTTGTAGCAGGTTTAGTTGATGATGCGGTGCTTATACG
GGCGGGGCCAACCGAGCTATTTCGTTACGAATATGGAAGCAATGGACAGCCGCAGGCCGCGTTGGTCGAAGTGCCAGCAA
ACATCTTGATTCCAAGGGCTGGACAGACGCTAACGGTGGAGTTTGTGGATCTCTATGGGAGTGTTTATAGCGCGACCCCC
TTATACCTCGTTTGGACACCCTAA

Upstream 100 bases:

>100_bases
TGCTGTTTAACATCTACCAAAACAAACGATCAATCTGATTGAGTTTGATAGCTTCAAAACCATTATGGTGGTGAATCCAC
ACAGTCTAAGGAGATTCTGC

Downstream 100 bases:

>100_bases
GCCTATGTTTTGTGCGAGCTACCCCGCTCCTGCTGCGATTGGGAGCGGGGTCGTGGCTACTACCTAGTTGCATAATTACG
GCGTTTTGGTACAATCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 887; Mature: 887

Protein sequence:

>887_residues
MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAAIMASQALADQQPQPVRIAKP
RFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSSLSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTF
NKATGVADGVIDSTLETFFSSVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS
TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPMVVTTFAGLVAGGTGAGPFAP
QGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPTISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYS
AMIRNGRLWTAHSFRTNAAGVASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF
SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSLDPSDDMTMWTIQQFTNATDS
YGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSAGSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLN
ITVAPGASAGARIVTVTNPDGQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT
PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTNPIATPGLVFFTGTISLPTVL
PSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGSNGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATP
LYLVWTP

Sequences:

>Translated_887_residues
MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAAIMASQALADQQPQPVRIAKP
RFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSSLSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTF
NKATGVADGVIDSTLETFFSSVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS
TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPMVVTTFAGLVAGGTGAGPFAP
QGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPTISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYS
AMIRNGRLWTAHSFRTNAAGVASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF
SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSLDPSDDMTMWTIQQFTNATDS
YGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSAGSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLN
ITVAPGASAGARIVTVTNPDGQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT
PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTNPIATPGLVFFTGTISLPTVL
PSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGSNGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATP
LYLVWTP
>Mature_887_residues
MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAAIMASQALADQQPQPVRIAKP
RFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSSLSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTF
NKATGVADGVIDSTLETFFSSVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS
TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPMVVTTFAGLVAGGTGAGPFAP
QGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPTISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYS
AMIRNGRLWTAHSFRTNAAGVASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF
SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSLDPSDDMTMWTIQQFTNATDS
YGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSAGSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLN
ITVAPGASAGARIVTVTNPDGQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT
PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTNPIATPGLVFFTGTISLPTVL
PSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGSNGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATP
LYLVWTP

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92040; Mature: 92040

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00053 RIBOSOMAL_S8 ; PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAA
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHH
IMASQALADQQPQPVRIAKPRFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSS
HHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHH
LSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTFNKATGVADGVIDSTLETFFS
HHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHCCCHHHHHHHHHHHHHH
SVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS
HHCCCCHHCCCCCCCCEEHEEECCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCC
TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPM
EEEEEEEEECCCCCHHHHHHCCCEEEEEEECCCHHHHCCEEECCCCEEEEECCCCCCCCH
VVTTFAGLVAGGTGAGPFAPQGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCE
ISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYSAMIRNGRLWTAHSFRTNAAG
EECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC
VASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF
CEECCCCCCCCEEEEEECCCCCCCCHHHCCCHHCCCCCCHHHHHHHHHEECCCCCEEEEE
SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSL
CCCCCCEECCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC
DPSDDMTMWTIQQFTNATDSYGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSA
CCCCCCEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
GSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLNITVAPGASAGARIVTVTNPD
CCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCC
GQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTN
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
PIATPGLVFFTGTISLPTVLPSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGS
CCCCCCEEEEEECEECCEEECCCCEEEECCCCHHHHHHHHCCEEEEECCCHHHEEEECCC
NGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATPLYLVWTP
CCCCCEEEEECCCEEEEECCCCEEEEEEEEHHCHHHCCCCEEEEECC
>Mature Secondary Structure
MRLKPVQLLIMTFLLLTMAQTGARFRAYARFDAPVQSILAGESRGSTQIGAAGIQRTSAA
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHHH
IMASQALADQQPQPVRIAKPRFQLDRQRLAENPNAPAVTQWPTQADTSPVGASNATALSS
HHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHHH
LSTTFTGATLADTNRIPPGTMGTVGPGQFVVAINGRLRTFNKATGVADGVIDSTLETFFS
HHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEHHHCCCHHHHHHHHHHHHHH
SVMTPPIANNITNDPRIRYDRMTQRWFLTVTDLPGLSGNQVNRLLLAVSDAASAGVITPS
HHCCCCHHCCCCCCCCEEHEEECCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCC
TVWTFYFFQGSNTDVMDYASLGVDVNALYIGANMFTTAGAFVGTNGYVVQKSSILGAGPM
EEEEEEEEECCCCCHHHHHHCCCEEEEEEECCCHHHHCCEEECCCCEEEEECCCCCCCCH
VVTTFAGLVAGGTGAGPFAPQGVDNFDPTATAGYFVGVDNATFSTIMFRRVSNPGSMTPT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCE
ISANIAVTVPTTTFPTRVPHLGNTGGANGQLDGIDDRLYSAMIRNGRLWTAHSFRTNAAG
EECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC
VASTATGARNSVRWYEFQNLDTTPTLRQAGTVFDNAAANPLFQWIPSVAVSGQGHAVMGF
CEECCCCCCCCEEEEEECCCCCCCCHHHCCCHHCCCCCCHHHHHHHHHEECCCCCEEEEE
SSAGATARANASMTSRLAGDTLGTMQAPTLYTASSFDYNPAADPGGAAGRLWGTTSYTSL
CCCCCCEECCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC
DPSDDMTMWTIQQFTNATDSYGVQVVKVLAPPPATPTTSNPASVDQGTTTDIIITGTSSA
CCCCCCEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
GSGFYDPGAGFSNRITASINGGGVTVNSVTYNSPTQITLNITVAPGASAGARIVTVTNPD
CCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCC
GQSLDSTSGIVTIVAAATATPTNTPTNTPTNTPTNTATNTPTNTPTNTPTNTATATVSNT
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
PTNTPTNTATATVSNTPTNTPTGTPTNTPVPTTFIRYLPFVTMSRLGSIATLGSAAIPTN
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
PIATPGLVFFTGTISLPTVLPSGGTYWLSSSPSSLVAGLVDDAVLIRAGPTELFRYEYGS
CCCCCCEEEEEECEECCEEECCCCEEEECCCCHHHHHHHHCCEEEEECCCHHHEEEECCC
NGQPQAALVEVPANILIPRAGQTLTVEFVDLYGSVYSATPLYLVWTP
CCCCCEEEEECCCEEEEECCCCEEEEEEEEHHCHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA