Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898637

Identifier: 159898637

GI number: 159898637

Start: 2658175

End: 2658852

Strand: Direct

Name: 159898637

Synonym: Haur_2116

Alternate gene names: NA

Gene position: 2658175-2658852 (Clockwise)

Preceding gene: 159898636

Following gene: 159898645

Centisome position: 41.88

GC content: 48.08

Gene sequence:

>678_bases
ATGCTACCTATTCAATGGCCGAGCACGCGACGATGGGGCATAGTTTTGGGAGTTTTGCTAGCGTTTTGGCCAAGTTTCGC
CTTGGCTTGTACCCAACCGATTGGTGGGCATCCCCGTTATACTGCGACTGAGCATACCAATGCCGCCGCCATCGTTTTAG
AAGGTGTCGTGATTGATGGAAAAGTCAACAATAATCCTGGCTCGCTCATTAACCTGGCAACTATCCAAGTATCTCAATAC
TTTAAAGGAATTGGACCTGAAATCGTTACCGTTGAAGGGTTTGGTTCAATCACAATGTGCCTTAGCCAAGTTGAAATCGG
TGATCATTTGATCTTCTATATCTATGTTGGAGCAAACAGTCAGTGGCATGCCCATTATATGAGTGCTGGCGATGCTGTAG
CAAGGCCAATACCTTCAATTAGGGCCGAAATTATCGCCGCAGTGGGCAGCCCACCAGTCGCACCATTGCCCTCAACGCCT
GGACCGCTTGATCCAACCTCAATTCCAATCACGACCCCTGCTGATCCATCAACAATTGTAGTGCCAACACCACAATTGCC
CATTGAACTTCCAGCGACCAGCCAAGCAGGTTTACCATTAATCTGGTGGGTTTTGCTAGGCCTCAGTTGCTTAGCCGGTG
GCATTTGGTTGCGTCAACACTATCTTAAATCAAGCTAA

Upstream 100 bases:

>100_bases
TTTACATCCATTTCGATCGATTAGAATCAATAGGTGTGTAGATAGGTGCAACGCTTGCACTGGCAATTGTAAGCGTTGCT
AGCACTGTGAGGTTTGGCAT

Downstream 100 bases:

>100_bases
ACTCATCGCCAGCCCAACGCTGAATAGCAACGTTGGGCTGGCGGCGGTTCGCACCAAATTAATCGCGTATGGTTGAGATT
ACAGCTCTTTTTTACGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDGKVNNNPGSLINLATIQVSQY
FKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANSQWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTP
GPLDPTSIPITTPADPSTIVVPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS

Sequences:

>Translated_225_residues
MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDGKVNNNPGSLINLATIQVSQY
FKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANSQWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTP
GPLDPTSIPITTPADPSTIVVPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS
>Mature_225_residues
MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDGKVNNNPGSLINLATIQVSQY
FKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANSQWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTP
GPLDPTSIPITTPADPSTIVVPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23940; Mature: 23940

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEEEEEEEC
KVNNNPGSLINLATIQVSQYFKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANS
EECCCCCCEEEEEEEEHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCC
QWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTPGPLDPTSIPITTPADPSTIV
CEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEE
VPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS
EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPIQWPSTRRWGIVLGVLLAFWPSFALACTQPIGGHPRYTATEHTNAAAIVLEGVVIDG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEEEEEEEC
KVNNNPGSLINLATIQVSQYFKGIGPEIVTVEGFGSITMCLSQVEIGDHLIFYIYVGANS
EECCCCCCEEEEEEEEHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCC
QWHAHYMSAGDAVARPIPSIRAEIIAAVGSPPVAPLPSTPGPLDPTSIPITTPADPSTIV
CEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEE
VPTPQLPIELPATSQAGLPLIWWVLLGLSCLAGGIWLRQHYLKSS
EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA