Click here to switch to the map view.

The map label for this gene is 159898512

Identifier: 159898512

GI number: 159898512

Start: 2446103

End: 2446855

Strand: Reverse

Name: 159898512

Synonym: Haur_1988

Alternate gene names: NA

Gene position: 2446855-2446103 (Counterclockwise)

Preceding gene: 159898518

Following gene: 159898511

Centisome position: 38.55

GC content: 47.01

Gene sequence:

>753_bases
ATGCCGGAATTTCTGGAGAACGTCGGCAAGTATTGGCATGAGACCAAACGACGCTATAATTGGCAATTTATTACAGCGTC
CGAGGAACTCAATTTTATTCAAACAATCGCCGAAAGCATCGCCCCAACCTCAGACCCCACCAGCATTACTAATGCAATTA
AACATGGCTACAATCGGCTGATCTACGACACGATTGTCTTTGCCATCCACAACCCCGATGATCCGGTTGCGCGGAGTGCA
GCCAATCGGGCATGTGCCGAGATTTGGTGCATAGCTCGCAATATTGCCATCGCCAGAGGCGTTGATCAAGCAGATATCGA
GGATATTGCCCAAGAGGTAACGCTGCGGCTCATCACCAACCCTGAAAAGGTTGAGAAACCTCACAAGTTAGCTGCTTGGA
TTGGATACCAAGTCTTAGATTTTCGTAAACGGTTCTATTCTGGCAAGCTCAGAAGTCAGCAAGTCGCGCTTGAAACAGCC
GAGACGGCGGCAAGCACAATCGATGTAGAAGCGTTGGTCGAACGGCATTTGATGCTTACCCTATTTAAGCCCTTACTAAA
GGAAGTGCTTTCGAACGCGCAGTATGTTATAATTTGTAAGCATCTAATTGATGGCTCACCACCTCACGAAGTTGCGCAAC
AACTCAATGTTGATCCTCATACTATCCACTCACAAAAATATCGTGCCCTGAAGATCATCCGAAACCACCCCAAGTTGCGT
GAATTGCTGGAGAGTATCCATGAACAACAATAA

Upstream 100 bases:

>100_bases
ATAATGCTCAGGCCTATTTGATATGAAACGATCGCATCGTATTCTTCATCGTACCAATCGGTATCCCAAGGCTTGTTAGC
TTTTGTACGAGGATGCAGCC

Downstream 100 bases:

>100_bases
AAATGTAAATCCTCCATTTCGGCTCTCACTTGATGAGGCACGCAATAAGTTGCCAGCCCTAGTAGCAGCAGAACTCGATA
ATGAGCCTGATCTGGAAACG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MPEFLENVGKYWHETKRRYNWQFITASEELNFIQTIAESIAPTSDPTSITNAIKHGYNRLIYDTIVFAIHNPDDPVARSA
ANRACAEIWCIARNIAIARGVDQADIEDIAQEVTLRLITNPEKVEKPHKLAAWIGYQVLDFRKRFYSGKLRSQQVALETA
ETAASTIDVEALVERHLMLTLFKPLLKEVLSNAQYVIICKHLIDGSPPHEVAQQLNVDPHTIHSQKYRALKIIRNHPKLR
ELLESIHEQQ

Sequences:

>Translated_250_residues
MPEFLENVGKYWHETKRRYNWQFITASEELNFIQTIAESIAPTSDPTSITNAIKHGYNRLIYDTIVFAIHNPDDPVARSA
ANRACAEIWCIARNIAIARGVDQADIEDIAQEVTLRLITNPEKVEKPHKLAAWIGYQVLDFRKRFYSGKLRSQQVALETA
ETAASTIDVEALVERHLMLTLFKPLLKEVLSNAQYVIICKHLIDGSPPHEVAQQLNVDPHTIHSQKYRALKIIRNHPKLR
ELLESIHEQQ
>Mature_249_residues
PEFLENVGKYWHETKRRYNWQFITASEELNFIQTIAESIAPTSDPTSITNAIKHGYNRLIYDTIVFAIHNPDDPVARSAA
NRACAEIWCIARNIAIARGVDQADIEDIAQEVTLRLITNPEKVEKPHKLAAWIGYQVLDFRKRFYSGKLRSQQVALETAE
TAASTIDVEALVERHLMLTLFKPLLKEVLSNAQYVIICKHLIDGSPPHEVAQQLNVDPHTIHSQKYRALKIIRNHPKLRE
LLESIHEQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28651; Mature: 28520

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFLENVGKYWHETKRRYNWQFITASEELNFIQTIAESIAPTSDPTSITNAIKHGYNRL
CCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IYDTIVFAIHNPDDPVARSAANRACAEIWCIARNIAIARGVDQADIEDIAQEVTLRLITN
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PEKVEKPHKLAAWIGYQVLDFRKRFYSGKLRSQQVALETAETAASTIDVEALVERHLMLT
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKPLLKEVLSNAQYVIICKHLIDGSPPHEVAQQLNVDPHTIHSQKYRALKIIRNHPKLR
HHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH
ELLESIHEQQ
HHHHHHHCCC
>Mature Secondary Structure 
PEFLENVGKYWHETKRRYNWQFITASEELNFIQTIAESIAPTSDPTSITNAIKHGYNRL
CHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IYDTIVFAIHNPDDPVARSAANRACAEIWCIARNIAIARGVDQADIEDIAQEVTLRLITN
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PEKVEKPHKLAAWIGYQVLDFRKRFYSGKLRSQQVALETAETAASTIDVEALVERHLMLT
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFKPLLKEVLSNAQYVIICKHLIDGSPPHEVAQQLNVDPHTIHSQKYRALKIIRNHPKLR
HHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH
ELLESIHEQQ
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA