| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898511
Identifier: 159898511
GI number: 159898511
Start: 2445454
End: 2446116
Strand: Reverse
Name: 159898511
Synonym: Haur_1987
Alternate gene names: NA
Gene position: 2446116-2445454 (Counterclockwise)
Preceding gene: 159898512
Following gene: 159898505
Centisome position: 38.54
GC content: 47.66
Gene sequence:
>663_bases ATGAACAACAATAAAAATGTAAATCCTCCATTTCGGCTCTCACTTGATGAGGCACGCAATAAGTTGCCAGCCCTAGTAGC AGCAGAACTCGATAATGAGCCTGATCTGGAAACGCGCTACGCCGATGTGTATGCAGCGCTGGATTTCTACGATGATCTGG TTGATGAATACGATGAACTTTATTACACGCTTAAAGAATATGAAACGCAGCCAGTGATCGACCATCACATTAGCCCACCA ATCGATTTGTTTGATCGGGTTTATCCGCCTAAAAAAGCGGCTGGGCCATCGTTGCTCGAACGAACCAAGGCTATATTGAG CCGCTTGGTGCTGCCATTACCAGCCTTAGCCCAACCAAAAGCTGCAATCCTCAGCTTAGATGATGAAGATTTGGAATATA TTTATGATGTGATTGAACACCCACCAGCAGCAATCGATCTGTCGGTGCACGTCTGGCTTGAAGTTATCTCCGCTACGCAG TTGGAAATTGTGGTTACTTTAGCCCCAGCGAGCGGGCCTCCTTGGACGGTTGCCGTCTTGCTTGGCGATACTGAGCTTCC GATCATTGGCACGAATAGCGCTTACCATGAAACTCGCTTTGGACCATTAAGCAGCTTTCCCACCACAAGCATTACGCTGG TAGCAATTCCTAACCCAGCTTAG
Upstream 100 bases:
>100_bases CAACTCAATGTTGATCCTCATACTATCCACTCACAAAAATATCGTGCCCTGAAGATCATCCGAAACCACCCCAAGTTGCG TGAATTGCTGGAGAGTATCC
Downstream 100 bases:
>100_bases CCCGCCGTTCACGATCAAAACTGTAGATCATGGTCAGCGCAGTTACCCCCATCGCTGCGCTGCCCAAACCTGAACTCAAG ATAAGCCCAACCAGACTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MNNNKNVNPPFRLSLDEARNKLPALVAAELDNEPDLETRYADVYAALDFYDDLVDEYDELYYTLKEYETQPVIDHHISPP IDLFDRVYPPKKAAGPSLLERTKAILSRLVLPLPALAQPKAAILSLDDEDLEYIYDVIEHPPAAIDLSVHVWLEVISATQ LEIVVTLAPASGPPWTVAVLLGDTELPIIGTNSAYHETRFGPLSSFPTTSITLVAIPNPA
Sequences:
>Translated_220_residues MNNNKNVNPPFRLSLDEARNKLPALVAAELDNEPDLETRYADVYAALDFYDDLVDEYDELYYTLKEYETQPVIDHHISPP IDLFDRVYPPKKAAGPSLLERTKAILSRLVLPLPALAQPKAAILSLDDEDLEYIYDVIEHPPAAIDLSVHVWLEVISATQ LEIVVTLAPASGPPWTVAVLLGDTELPIIGTNSAYHETRFGPLSSFPTTSITLVAIPNPA >Mature_220_residues MNNNKNVNPPFRLSLDEARNKLPALVAAELDNEPDLETRYADVYAALDFYDDLVDEYDELYYTLKEYETQPVIDHHISPP IDLFDRVYPPKKAAGPSLLERTKAILSRLVLPLPALAQPKAAILSLDDEDLEYIYDVIEHPPAAIDLSVHVWLEVISATQ LEIVVTLAPASGPPWTVAVLLGDTELPIIGTNSAYHETRFGPLSSFPTTSITLVAIPNPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24356; Mature: 24356
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNKNVNPPFRLSLDEARNKLPALVAAELDNEPDLETRYADVYAALDFYDDLVDEYDEL CCCCCCCCCCEEEEHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YYTLKEYETQPVIDHHISPPIDLFDRVYPPKKAAGPSLLERTKAILSRLVLPLPALAQPK HHHHHHHCCCCCHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC AAILSLDDEDLEYIYDVIEHPPAAIDLSVHVWLEVISATQLEIVVTLAPASGPPWTVAVL EEEEECCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEE LGDTELPIIGTNSAYHETRFGPLSSFPTTSITLVAIPNPA ECCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MNNNKNVNPPFRLSLDEARNKLPALVAAELDNEPDLETRYADVYAALDFYDDLVDEYDEL CCCCCCCCCCEEEEHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YYTLKEYETQPVIDHHISPPIDLFDRVYPPKKAAGPSLLERTKAILSRLVLPLPALAQPK HHHHHHHCCCCCHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC AAILSLDDEDLEYIYDVIEHPPAAIDLSVHVWLEVISATQLEIVVTLAPASGPPWTVAVL EEEEECCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEE LGDTELPIIGTNSAYHETRFGPLSSFPTTSITLVAIPNPA ECCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA