Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898494

Identifier: 159898494

GI number: 159898494

Start: 2415151

End: 2417355

Strand: Reverse

Name: 159898494

Synonym: Haur_1970

Alternate gene names: NA

Gene position: 2417355-2415151 (Counterclockwise)

Preceding gene: 159898501

Following gene: 159898493

Centisome position: 38.09

GC content: 50.88

Gene sequence:

>2205_bases
ATGCGTCTTGGTCGTTCATGGATGATCATCGTTGCAGTTATGATCATTGCGCTGCTCAGTGTGATCACTGCAACCGCCAT
GGTCAGCCCCAGTGTCAGCTCATCGGATGGGCTTTGGCAGAATGTTGCTGAACAGGACATTCAACAAAAAGGCTCACGCG
AAATCATTCCAGTAGTGTATCGCACGGTCGCCTTGGATCTTAATTTGCTACAACAACACTTACGTCAAGTGCCTCAAGAA
GCCCAAACCAAGGTGCAAAAATCTGGCTTTATGTTAGATTTACCGCTACCAGATGGCCAATTTGGCAAATTTCGCGTCGT
CGAATCGCCAATTATGGCTCCCGAATTAGCCGCCAAGTTTCCTGAAATTCGCACCTTCTTGGCCCAATCAGTTGATCAGC
CTGCAACCAGCGCTCGGCTTGATATCACGCCACGCGGCTTTCATGGCATGATCTTGAGCGAATCAGGTCGGATTTTTATC
GATCCATATAGCCGCAATGATACGGCTAACTATATTGTGTACGATGCTCGCAATTTTGTGGCCGACCCTAGCAAATTGGC
CGAACGGACTGGCAACGATTACGAGCCAAATCCATTAGGAAATCCATCGTCGATCATTCCTGAACGCTACTCGATTGGTG
AAACCTTGCGCACCTATCGCTTGGCCATGGCTGCCACTGGCGAATACACCGCATTCCACGGTGGCACGGTCAATGGCGCG
ATGGCGGCAATCGTCACCAGCATGAATCGGGTTAACGGAATCTACGAACGCGATCTTTCAGTGCGCATGCAATTAATCGC
CAACAATGATCTGATTGTGTATACCAATGCGAGCAGCGACCCCTATACCAACAATAGTGGTGGTACGATGCTTGGCCAAA
ACCAAACCAATTTGACCAACGTGATTGGCGGGGCCAACTATGATATTGGCCACGTGTTCAGCACTGGCGGCGGTGGGGTC
GCTACTTTACAATCAGTCTGTTCTTCAGGCAGCAAAGCGCGTGGGGTTACTGGCTCAGGCTCACCAGTTGGCGATGCCTT
CGATGTCGATTATGTCGCGCACGAAATTGGTCACCAATTTGGTGGTCTTCACACCTTCAATGGCTCAACTGGCAGTTGTA
GTGGTGGCAATCGTTCCAGCAGCGCTGCCTACGAACCAGGTAGTGGTACAACCATTATGGCTTATGCCGGGATTTGTGGC
TCGGAAAACTTGCAACCAAACAGCGACTTCGACTTCCACGTCAAGAGCTTAGAAGAAATTTCAGCCTTCATCACCACTGG
CGGCGGCGCAACCTGTGGCACAACTCAAGCCACTGGCAATACCCCACCAGTCGCCAATGCAGGCAGCGATTACACCATCC
CAGCCAATACGCCATTCGAATTGACTGCTAGCGCTAACGATGCTGAAGACAATAGTTTGACCTACGATTGGGAACAATAC
GATTTGGGTGCGGCCTCACCACCAAACACCGATAACGGCAATCGCCCAATCTTCCGTAGCTTCAATTCAACCGCCAGCAA
TGTGCGTACCTTGCCAAAACTGAGCGATATTTTGAACAATACCACGACGATTGGCGAATCGTTGCCAACTACTAACCGCA
ACCTGACCTTCCGCTTGACCGTGCGTGATAACCACGCTGGGGCTGGTGGTTATGGCTTGGATACGGCGGTTCTGACTGTC
AACAATACTGCTGGACCATTCTTGGTAACTGCACCAAACACGGCAATCGCCTGGACAGGCGGCGCGAACGAGTCGGTCAC
GTGGAATGTTGCCAACACCACCGCTGCGCCAATTAGCTGTGCTAATGTTGATATTTTGCTCTCGAAAGATGGCGGCACAA
GCTTTGAAGCCTTGGTCAGCAACACCCCCAACGATGGCGATGAAACTGTTGTTGCGCCAAACGTTAATGCTGCTGCTGCG
CGGATCAAAGTGCGTTGTGCTAACAATATCTTCTTTGATATTTCTAACGCCAACTTTGCGATCAACGGGGTCAATATCAC
ACCAACTCCAGTTACACCAACATTAACCCCAACCAATACTCCCACTCGCACGCCAACATTAACCCCAACTCAAACATCAA
CCCCAACCCAAACCGCGACGGCGACCCCAACAGCTAGCCCAACCGTCAGCGTTACGCCGACGGCGAGCGTTACACCAACC
CCTGAGAACTATAGCGTTTATCTGCCTGTCGCAATCAAAAATTAA

Upstream 100 bases:

>100_bases
GGCTTTTTTTATAAACTAAGGTTGGTTGCATGCCCGCTTGCTTTAAGACCTGTTAATTAATTGTATAATGGGCCATGCTG
TTTTGTGGAAAGGAATACCT

Downstream 100 bases:

>100_bases
ACCATCCAACTCCCCAATTGTACGTAGTATGCTGCGTACAATTGGGGAGTTTTTTATGCCTGTGATTTGTTGGTTCCGCC
GCGATTTACGCCTAACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 734; Mature: 734

Protein sequence:

>734_residues
MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVYRTVALDLNLLQQHLRQVPQE
AQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKFPEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFI
DPYSRNDTANYIVYDARNFVADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA
MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTNVIGGANYDIGHVFSTGGGGV
ATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQFGGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICG
SENLQPNSDFDFHVKSLEEISAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY
DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLTVRDNHAGAGGYGLDTAVLTV
NNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISCANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAA
RIKVRCANNIFFDISNANFAINGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT
PENYSVYLPVAIKN

Sequences:

>Translated_734_residues
MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVYRTVALDLNLLQQHLRQVPQE
AQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKFPEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFI
DPYSRNDTANYIVYDARNFVADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA
MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTNVIGGANYDIGHVFSTGGGGV
ATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQFGGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICG
SENLQPNSDFDFHVKSLEEISAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY
DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLTVRDNHAGAGGYGLDTAVLTV
NNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISCANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAA
RIKVRCANNIFFDISNANFAINGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT
PENYSVYLPVAIKN
>Mature_734_residues
MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVYRTVALDLNLLQQHLRQVPQE
AQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKFPEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFI
DPYSRNDTANYIVYDARNFVADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA
MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTNVIGGANYDIGHVFSTGGGGV
ATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQFGGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICG
SENLQPNSDFDFHVKSLEEISAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY
DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLTVRDNHAGAGGYGLDTAVLTV
NNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISCANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAA
RIKVRCANNIFFDISNANFAINGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT
PENYSVYLPVAIKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77366; Mature: 77366

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
RTVALDLNLLQQHLRQVPQEAQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKF
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHC
PEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFIDPYSRNDTANYIVYDARNFV
HHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEECCCCCCCCCCEEEEECCHHC
ADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA
CCHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHEEEEECCCEEEECCCCCCHH
MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTN
HHHHHHHHHHHCCHHHCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCCHHH
VIGGANYDIGHVFSTGGGGVATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQF
HHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
GGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICGSENLQPNSDFDFHVKSLEEI
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHH
SAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEHHHC
DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLT
CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEE
VRDNHAGAGGYGLDTAVLTVNNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISC
EECCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCEEE
ANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAARIKVRCANNIFFDISNANFA
CCEEEEEECCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEECCEEEEECCCCEE
INGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT
EECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCC
PENYSVYLPVAIKN
CCCEEEEEEEEECC
>Mature Secondary Structure
MRLGRSWMIIVAVMIIALLSVITATAMVSPSVSSSDGLWQNVAEQDIQQKGSREIIPVVY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
RTVALDLNLLQQHLRQVPQEAQTKVQKSGFMLDLPLPDGQFGKFRVVESPIMAPELAAKF
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHC
PEIRTFLAQSVDQPATSARLDITPRGFHGMILSESGRIFIDPYSRNDTANYIVYDARNFV
HHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEECCCCCCCCCCEEEEECCHHC
ADPSKLAERTGNDYEPNPLGNPSSIIPERYSIGETLRTYRLAMAATGEYTAFHGGTVNGA
CCHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHEEEEECCCEEEECCCCCCHH
MAAIVTSMNRVNGIYERDLSVRMQLIANNDLIVYTNASSDPYTNNSGGTMLGQNQTNLTN
HHHHHHHHHHHCCHHHCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCCCHHH
VIGGANYDIGHVFSTGGGGVATLQSVCSSGSKARGVTGSGSPVGDAFDVDYVAHEIGHQF
HHCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
GGLHTFNGSTGSCSGGNRSSSAAYEPGSGTTIMAYAGICGSENLQPNSDFDFHVKSLEEI
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEHHHHHHH
SAFITTGGGATCGTTQATGNTPPVANAGSDYTIPANTPFELTASANDAEDNSLTYDWEQY
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEHHHC
DLGAASPPNTDNGNRPIFRSFNSTASNVRTLPKLSDILNNTTTIGESLPTTNRNLTFRLT
CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEE
VRDNHAGAGGYGLDTAVLTVNNTAGPFLVTAPNTAIAWTGGANESVTWNVANTTAAPISC
EECCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCCCEEE
ANVDILLSKDGGTSFEALVSNTPNDGDETVVAPNVNAAAARIKVRCANNIFFDISNANFA
CCEEEEEECCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEECCEEEEECCCCEE
INGVNITPTPVTPTLTPTNTPTRTPTLTPTQTSTPTQTATATPTASPTVSVTPTASVTPT
EECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCCCC
PENYSVYLPVAIKN
CCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA