| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898480
Identifier: 159898480
GI number: 159898480
Start: 2377255
End: 2380071
Strand: Reverse
Name: 159898480
Synonym: Haur_1956
Alternate gene names: NA
Gene position: 2380071-2377255 (Counterclockwise)
Preceding gene: 159898485
Following gene: 159898479
Centisome position: 37.5
GC content: 54.7
Gene sequence:
>2817_bases ATGGCCCGAGTCGATGATCGTCCGCTGTTCTACGCCGCCGCTCAGAGCTTTGTTGATCGAGCATTGCGGGCTGACGATTC GCTATTTACGCCTGGCGTTGCTGTTTGGAGTGCGGCCAACCTTGATGATCTCTACCAACGCTTCGTCGGCCAACCCGACG AATCAGCTGATAGCTTCATGATCAAATTCCAACGCCAACTGCATGAAGCGCAACCAACCATCATCCAGCTTGCTGCCGAA CTCCAATTTGTCTACTATCTGATTTCGCGCAAAATCACCGGACGCGCCAAGCGCGACCAGATTAATACCATCCTCAAATG GTCACCCGAGCCAGTCAGCATTCCCCATGAGCTTGACGGAGCGCTTGATCAAGGCATCGCCAACACCGGCACAGCCTATC AGACCTACAAATTTTACCAACTAAGCTTTATCATCGAATTTATGCAACACTGGAAAGGGCTATCGCAGGCAGCTCGTACA ACAGCATTGGCTGATCCATGGGAATTTAAGCAGATTTTATTCTCGCTGCCAATCAAAACCGCCTATGCCGCCCGCGAAAT GCTGCTGCATCTGGTACACCCCGATAGCTTTGAATCGATCGTTTCGCGTGATCATAAAGCTAATTATGCTCGCCAATATG CCCATCATAAACAAACCACCAGCAACGATATTGATCGCCAGTTGTGGGAGATTCGCCGCGCCTTGACCCCACAGTATGGG GCAAACTTCAGCTTCTATGCCATTCAACATGATGAAACTCAGCGGCCTGATTTCCCTGTGCCCCTGCCATTGGGGCCAAA ACTACGCCCCTATATTCAGCTGGTAGCCATGCTCTCCACCAACAGTTACAGTGCCGAGCAAATCGTTGATGTGCTCGGGC AGGCCAACCCACCCTTAGTACAACTCACGGCCCGCCCGAATGCCGATGATCTGCTTGATGTATTGCAACTGTTACGTTTA GTTGAGCAACTGCCCGACGACCGCTATCGGCGCTGGCCGCACCTCAACGATCTGCATGAGGAAACCATGCTGCGCTATAG TGCGCTAACCCTCGTGCTGCCCGATAGCGAAGCTAACGACGATTATTGGCTACCAATTATGGCGATGCCCTTCGATGGAG TAGCTCACCCCGCCGAAGCATGGCCTGGCCCGGCCTTGTTACGTGATTGGTATCGCGAGGCAGGCTTGATTGAGCAGGGC GAGCATAGTTGGCTGCGCAGTCGCCCCGCTGCCTTACAACCCATAGCCAACCCAACCACCCCCACTGCCCATGCGATCAA TAGCTTTCTTGAGCATATCGAGCGCGTGCAACGCAGCCAACGCAGCACCATGGATAGCGCCTTGCAAGATCAACCGCTGC CGCAACTGACCACCGCCGTGCTCAACGAGCGCATCGCCGAACTGCAACGCGAACTGTTGGTCAACCGCGTCACCCTACTG CGAATCTACCGCGCCCTGATCGCAGGCCAGCATGTGATTTTGAGTGGCCCGCCAGGCACTGGCAAAACCCACTTAGCCCA ACGGCTGCCCGAGATCTTCTGGCGCGATACTGATGCCAGTATCAGCTTGCGCATGCCAACCTCGCCTGCCTTACCACCGA CCGAGCCACCAATTGAAGAGCGCCATACCCGCCATGGCTATGCCGTTCAAATTGAAACTGCCACCGAAACCTGGAGCAGC CGAGATATTATTGGCGGCATCGTGCCTCAACTCCAGCGCAGTGCTGGCGGCAAAACCTTGGTGTATGGAGTGCGCCATGG CTGCCTCACCAGCGCAGTGCTTTCGAACTATGCGGGCTACGACGGCGAAAACGTGCCCAACCCCGAAACCCTGCAACGCA CTGAGGTGATGGTTAAACAGCAACGCTACCGTGGTCGCTGGCTGGTCATCGACGAATTTACCCGAGCGCATATTGATGCC GCTTTTGGCAGCTTGCTCACGACCCTTGGCGGCCAACGCAACGCCCCACTCAGCATCCCAACCGACGATGGCGTTGTAGT GCAAGTGCCTTTGCCACGCGATTTCCGCATCATCGGCACGCTCAACTCGTTTGATCGTCACTTTCTCAACCAAATGAGCG AAGCCATGAAACGGCGTTTTGTCTTTATTGATCTGTTGCCACCAAGCAGCGACGATGCCGATGAAGAGCAAGGCATCGCG GCCTATCGTGCCCTTTTACGCCTGAGCGACCAAAAACTCGATACCATCGCCAGCAACGATGCAGCCGGACGAGCCACGTG GCGTGGTGTGCTCAATGTTAATCGCGAGATCAATCGCGATGGTGACGGCTCACGGGTCAACTATCGGCTAGAGGTCGAAA ATCAGGATGCCAAAGATGTATTGGATAGTTTCTGGCGCATCTTCAGCGCAATTCGGGTCTATCGCCAGCTTGGCACTGCC CAGGCCGAGGCAGTGTATGCCGCAACCTTTGCTGGCCATGCCATTGGCTTGAGTTGGCACGATGCGCTCGATTACGCCCT TGCCGATACCTTGGCCGACCAACTGCAAGTGCTCAATCGCGATGAACAGCGGGCCTTATTGGCCTATCTGGCCTATGCTC ACAATCCCAAAGAATTTAGTGAGCAGCTCAAAACGATCATCAAGAGCCTGCCGTTGCCGCGCCAAGCCAGCCATTTAACC CAACTCCAAACAGCTAGCCCCAAGCATGCTAGTGGCTCGATCAACATAGCCAACATTGATGAGCTAACGATGACGCACAT TAGCCAAATTTTTGATCTCGGCACAGAATTGCTGCTCGATCAAACCAGTCAATTTGCCCAACGCTTGCGCACGTTCAGCA GCGAACGAGGCCTGTGA
Upstream 100 bases:
>100_bases ATACCAAAAAAATTTCACCGAACCGCATGCTAATGGTATACTGAGGCCCAGCAACCTAGAGGCAACCTACAACCTCGCGA GCACCAAAGGAGTTGACATC
Downstream 100 bases:
>100_bases TGGTGTATAGCCCAACGCCAATTGAGCAAAGTACCTTCGCCACCATACAAGCCCGCCTGATCGAGCTATTGCTACGCCAC AATCAGGCCAATTTTCAGCA
Product: ATPase
Products: NA
Alternate protein names: GTPase Subunit Of Restriction Endonuclease-Like Protein; 5-Methylcytosine-Specific Restriction McrBC Subunit McrB; McrB Domain Protein; GTPase Subunit Of Restriction Endonuclease; Type II Restriction
Number of amino acids: Translated: 938; Mature: 937
Protein sequence:
>938_residues MARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFMIKFQRQLHEAQPTIIQLAAE LQFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDGALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAART TALADPWEFKQILFSLPIKTAYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYG ANFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLVQLTARPNADDLLDVLQLLRL VEQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEANDDYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQG EHSWLRSRPAALQPIANPTTPTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLL RIYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEERHTRHGYAVQIETATETWSS RDIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGYDGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDA AFGSLLTTLGGQRNAPLSIPTDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIA AYRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDVLDSFWRIFSAIRVYRQLGTA QAEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNRDEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLT QLQTASPKHASGSINIANIDELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL
Sequences:
>Translated_938_residues MARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFMIKFQRQLHEAQPTIIQLAAE LQFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDGALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAART TALADPWEFKQILFSLPIKTAYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYG ANFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLVQLTARPNADDLLDVLQLLRL VEQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEANDDYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQG EHSWLRSRPAALQPIANPTTPTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLL RIYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEERHTRHGYAVQIETATETWSS RDIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGYDGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDA AFGSLLTTLGGQRNAPLSIPTDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIA AYRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDVLDSFWRIFSAIRVYRQLGTA QAEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNRDEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLT QLQTASPKHASGSINIANIDELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL >Mature_937_residues ARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFMIKFQRQLHEAQPTIIQLAAEL QFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDGALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAARTT ALADPWEFKQILFSLPIKTAYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYGA NFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLVQLTARPNADDLLDVLQLLRLV EQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEANDDYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQGE HSWLRSRPAALQPIANPTTPTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLLR IYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEERHTRHGYAVQIETATETWSSR DIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGYDGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDAA FGSLLTTLGGQRNAPLSIPTDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIAA YRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDVLDSFWRIFSAIRVYRQLGTAQ AEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNRDEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLTQ LQTASPKHASGSINIANIDELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL
Specific function: Unknown
COG id: COG1401
COG function: function code V; GTPase subunit of restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105951; Mature: 105820
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFM CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHHHHH IKFQRQLHEAQPTIIQLAAELQFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHH ALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAARTTALADPWEFKQILFSLPIKT HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH AYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC ANFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLV CCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEE QLTARPNADDLLDVLQLLRLVEQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEAND EEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCCC DYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQGEHSWLRSRPAALQPIANPTT CEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC PTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RIYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEE HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHH RHTRHGYAVQIETATETWSSRDIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGY HHCCCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCC DGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDAAFGSLLTTLGGQRNAPLSIP CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEECC TDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIA CCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHH AYRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCEEEEEEEECCCCHHHH LDSFWRIFSAIRVYRQLGTAQAEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC DEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLTQLQTASPKHASGSINIANID CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEECCCH ELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFM CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHHHHH IKFQRQLHEAQPTIIQLAAELQFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHH ALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAARTTALADPWEFKQILFSLPIKT HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH AYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC ANFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLV CCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEE QLTARPNADDLLDVLQLLRLVEQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEAND EEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCCC DYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQGEHSWLRSRPAALQPIANPTT CEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC PTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RIYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEE HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHH RHTRHGYAVQIETATETWSSRDIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGY HHCCCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCC DGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDAAFGSLLTTLGGQRNAPLSIP CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEECC TDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIA CCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHH AYRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCEEEEEEEECCCCHHHH LDSFWRIFSAIRVYRQLGTAQAEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC DEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLTQLQTASPKHASGSINIANID CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEECCCH ELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA