Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898480

Identifier: 159898480

GI number: 159898480

Start: 2377255

End: 2380071

Strand: Reverse

Name: 159898480

Synonym: Haur_1956

Alternate gene names: NA

Gene position: 2380071-2377255 (Counterclockwise)

Preceding gene: 159898485

Following gene: 159898479

Centisome position: 37.5

GC content: 54.7

Gene sequence:

>2817_bases
ATGGCCCGAGTCGATGATCGTCCGCTGTTCTACGCCGCCGCTCAGAGCTTTGTTGATCGAGCATTGCGGGCTGACGATTC
GCTATTTACGCCTGGCGTTGCTGTTTGGAGTGCGGCCAACCTTGATGATCTCTACCAACGCTTCGTCGGCCAACCCGACG
AATCAGCTGATAGCTTCATGATCAAATTCCAACGCCAACTGCATGAAGCGCAACCAACCATCATCCAGCTTGCTGCCGAA
CTCCAATTTGTCTACTATCTGATTTCGCGCAAAATCACCGGACGCGCCAAGCGCGACCAGATTAATACCATCCTCAAATG
GTCACCCGAGCCAGTCAGCATTCCCCATGAGCTTGACGGAGCGCTTGATCAAGGCATCGCCAACACCGGCACAGCCTATC
AGACCTACAAATTTTACCAACTAAGCTTTATCATCGAATTTATGCAACACTGGAAAGGGCTATCGCAGGCAGCTCGTACA
ACAGCATTGGCTGATCCATGGGAATTTAAGCAGATTTTATTCTCGCTGCCAATCAAAACCGCCTATGCCGCCCGCGAAAT
GCTGCTGCATCTGGTACACCCCGATAGCTTTGAATCGATCGTTTCGCGTGATCATAAAGCTAATTATGCTCGCCAATATG
CCCATCATAAACAAACCACCAGCAACGATATTGATCGCCAGTTGTGGGAGATTCGCCGCGCCTTGACCCCACAGTATGGG
GCAAACTTCAGCTTCTATGCCATTCAACATGATGAAACTCAGCGGCCTGATTTCCCTGTGCCCCTGCCATTGGGGCCAAA
ACTACGCCCCTATATTCAGCTGGTAGCCATGCTCTCCACCAACAGTTACAGTGCCGAGCAAATCGTTGATGTGCTCGGGC
AGGCCAACCCACCCTTAGTACAACTCACGGCCCGCCCGAATGCCGATGATCTGCTTGATGTATTGCAACTGTTACGTTTA
GTTGAGCAACTGCCCGACGACCGCTATCGGCGCTGGCCGCACCTCAACGATCTGCATGAGGAAACCATGCTGCGCTATAG
TGCGCTAACCCTCGTGCTGCCCGATAGCGAAGCTAACGACGATTATTGGCTACCAATTATGGCGATGCCCTTCGATGGAG
TAGCTCACCCCGCCGAAGCATGGCCTGGCCCGGCCTTGTTACGTGATTGGTATCGCGAGGCAGGCTTGATTGAGCAGGGC
GAGCATAGTTGGCTGCGCAGTCGCCCCGCTGCCTTACAACCCATAGCCAACCCAACCACCCCCACTGCCCATGCGATCAA
TAGCTTTCTTGAGCATATCGAGCGCGTGCAACGCAGCCAACGCAGCACCATGGATAGCGCCTTGCAAGATCAACCGCTGC
CGCAACTGACCACCGCCGTGCTCAACGAGCGCATCGCCGAACTGCAACGCGAACTGTTGGTCAACCGCGTCACCCTACTG
CGAATCTACCGCGCCCTGATCGCAGGCCAGCATGTGATTTTGAGTGGCCCGCCAGGCACTGGCAAAACCCACTTAGCCCA
ACGGCTGCCCGAGATCTTCTGGCGCGATACTGATGCCAGTATCAGCTTGCGCATGCCAACCTCGCCTGCCTTACCACCGA
CCGAGCCACCAATTGAAGAGCGCCATACCCGCCATGGCTATGCCGTTCAAATTGAAACTGCCACCGAAACCTGGAGCAGC
CGAGATATTATTGGCGGCATCGTGCCTCAACTCCAGCGCAGTGCTGGCGGCAAAACCTTGGTGTATGGAGTGCGCCATGG
CTGCCTCACCAGCGCAGTGCTTTCGAACTATGCGGGCTACGACGGCGAAAACGTGCCCAACCCCGAAACCCTGCAACGCA
CTGAGGTGATGGTTAAACAGCAACGCTACCGTGGTCGCTGGCTGGTCATCGACGAATTTACCCGAGCGCATATTGATGCC
GCTTTTGGCAGCTTGCTCACGACCCTTGGCGGCCAACGCAACGCCCCACTCAGCATCCCAACCGACGATGGCGTTGTAGT
GCAAGTGCCTTTGCCACGCGATTTCCGCATCATCGGCACGCTCAACTCGTTTGATCGTCACTTTCTCAACCAAATGAGCG
AAGCCATGAAACGGCGTTTTGTCTTTATTGATCTGTTGCCACCAAGCAGCGACGATGCCGATGAAGAGCAAGGCATCGCG
GCCTATCGTGCCCTTTTACGCCTGAGCGACCAAAAACTCGATACCATCGCCAGCAACGATGCAGCCGGACGAGCCACGTG
GCGTGGTGTGCTCAATGTTAATCGCGAGATCAATCGCGATGGTGACGGCTCACGGGTCAACTATCGGCTAGAGGTCGAAA
ATCAGGATGCCAAAGATGTATTGGATAGTTTCTGGCGCATCTTCAGCGCAATTCGGGTCTATCGCCAGCTTGGCACTGCC
CAGGCCGAGGCAGTGTATGCCGCAACCTTTGCTGGCCATGCCATTGGCTTGAGTTGGCACGATGCGCTCGATTACGCCCT
TGCCGATACCTTGGCCGACCAACTGCAAGTGCTCAATCGCGATGAACAGCGGGCCTTATTGGCCTATCTGGCCTATGCTC
ACAATCCCAAAGAATTTAGTGAGCAGCTCAAAACGATCATCAAGAGCCTGCCGTTGCCGCGCCAAGCCAGCCATTTAACC
CAACTCCAAACAGCTAGCCCCAAGCATGCTAGTGGCTCGATCAACATAGCCAACATTGATGAGCTAACGATGACGCACAT
TAGCCAAATTTTTGATCTCGGCACAGAATTGCTGCTCGATCAAACCAGTCAATTTGCCCAACGCTTGCGCACGTTCAGCA
GCGAACGAGGCCTGTGA

Upstream 100 bases:

>100_bases
ATACCAAAAAAATTTCACCGAACCGCATGCTAATGGTATACTGAGGCCCAGCAACCTAGAGGCAACCTACAACCTCGCGA
GCACCAAAGGAGTTGACATC

Downstream 100 bases:

>100_bases
TGGTGTATAGCCCAACGCCAATTGAGCAAAGTACCTTCGCCACCATACAAGCCCGCCTGATCGAGCTATTGCTACGCCAC
AATCAGGCCAATTTTCAGCA

Product: ATPase

Products: NA

Alternate protein names: GTPase Subunit Of Restriction Endonuclease-Like Protein; 5-Methylcytosine-Specific Restriction McrBC Subunit McrB; McrB Domain Protein; GTPase Subunit Of Restriction Endonuclease; Type II Restriction

Number of amino acids: Translated: 938; Mature: 937

Protein sequence:

>938_residues
MARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFMIKFQRQLHEAQPTIIQLAAE
LQFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDGALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAART
TALADPWEFKQILFSLPIKTAYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYG
ANFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLVQLTARPNADDLLDVLQLLRL
VEQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEANDDYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQG
EHSWLRSRPAALQPIANPTTPTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLL
RIYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEERHTRHGYAVQIETATETWSS
RDIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGYDGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDA
AFGSLLTTLGGQRNAPLSIPTDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIA
AYRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDVLDSFWRIFSAIRVYRQLGTA
QAEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNRDEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLT
QLQTASPKHASGSINIANIDELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL

Sequences:

>Translated_938_residues
MARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFMIKFQRQLHEAQPTIIQLAAE
LQFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDGALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAART
TALADPWEFKQILFSLPIKTAYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYG
ANFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLVQLTARPNADDLLDVLQLLRL
VEQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEANDDYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQG
EHSWLRSRPAALQPIANPTTPTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLL
RIYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEERHTRHGYAVQIETATETWSS
RDIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGYDGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDA
AFGSLLTTLGGQRNAPLSIPTDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIA
AYRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDVLDSFWRIFSAIRVYRQLGTA
QAEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNRDEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLT
QLQTASPKHASGSINIANIDELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL
>Mature_937_residues
ARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFMIKFQRQLHEAQPTIIQLAAEL
QFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDGALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAARTT
ALADPWEFKQILFSLPIKTAYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYGA
NFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLVQLTARPNADDLLDVLQLLRLV
EQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEANDDYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQGE
HSWLRSRPAALQPIANPTTPTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLLR
IYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEERHTRHGYAVQIETATETWSSR
DIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGYDGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDAA
FGSLLTTLGGQRNAPLSIPTDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIAA
YRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDVLDSFWRIFSAIRVYRQLGTAQ
AEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNRDEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLTQ
LQTASPKHASGSINIANIDELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL

Specific function: Unknown

COG id: COG1401

COG function: function code V; GTPase subunit of restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 105951; Mature: 105820

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFM
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHHHHH
IKFQRQLHEAQPTIIQLAAELQFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHH
ALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAARTTALADPWEFKQILFSLPIKT
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH
AYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
ANFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLV
CCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEE
QLTARPNADDLLDVLQLLRLVEQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEAND
EEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCCC
DYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQGEHSWLRSRPAALQPIANPTT
CEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC
PTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEE
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHH
RHTRHGYAVQIETATETWSSRDIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGY
HHCCCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCC
DGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDAAFGSLLTTLGGQRNAPLSIP
CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEECC
TDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIA
CCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHH
AYRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCEEEEEEEECCCCHHHH
LDSFWRIFSAIRVYRQLGTAQAEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLTQLQTASPKHASGSINIANID
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEECCCH
ELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARVDDRPLFYAAAQSFVDRALRADDSLFTPGVAVWSAANLDDLYQRFVGQPDESADSFM
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCHHHHH
IKFQRQLHEAQPTIIQLAAELQFVYYLISRKITGRAKRDQINTILKWSPEPVSIPHELDG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHH
ALDQGIANTGTAYQTYKFYQLSFIIEFMQHWKGLSQAARTTALADPWEFKQILFSLPIKT
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH
AYAAREMLLHLVHPDSFESIVSRDHKANYARQYAHHKQTTSNDIDRQLWEIRRALTPQYG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
ANFSFYAIQHDETQRPDFPVPLPLGPKLRPYIQLVAMLSTNSYSAEQIVDVLGQANPPLV
CCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEE
QLTARPNADDLLDVLQLLRLVEQLPDDRYRRWPHLNDLHEETMLRYSALTLVLPDSEAND
EEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCCC
DYWLPIMAMPFDGVAHPAEAWPGPALLRDWYREAGLIEQGEHSWLRSRPAALQPIANPTT
CEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC
PTAHAINSFLEHIERVQRSQRSTMDSALQDQPLPQLTTAVLNERIAELQRELLVNRVTLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIYRALIAGQHVILSGPPGTGKTHLAQRLPEIFWRDTDASISLRMPTSPALPPTEPPIEE
HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHH
RHTRHGYAVQIETATETWSSRDIIGGIVPQLQRSAGGKTLVYGVRHGCLTSAVLSNYAGY
HHCCCCEEEEEEEHHCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCC
DGENVPNPETLQRTEVMVKQQRYRGRWLVIDEFTRAHIDAAFGSLLTTLGGQRNAPLSIP
CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEECC
TDDGVVVQVPLPRDFRIIGTLNSFDRHFLNQMSEAMKRRFVFIDLLPPSSDDADEEQGIA
CCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHH
AYRALLRLSDQKLDTIASNDAAGRATWRGVLNVNREINRDGDGSRVNYRLEVENQDAKDV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCEEEEEEEECCCCHHHH
LDSFWRIFSAIRVYRQLGTAQAEAVYAATFAGHAIGLSWHDALDYALADTLADQLQVLNR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DEQRALLAYLAYAHNPKEFSEQLKTIIKSLPLPRQASHLTQLQTASPKHASGSINIANID
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEECCCH
ELTMTHISQIFDLGTELLLDQTSQFAQRLRTFSSERGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA