| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898485
Identifier: 159898485
GI number: 159898485
Start: 2395924
End: 2396925
Strand: Reverse
Name: 159898485
Synonym: Haur_1961
Alternate gene names: NA
Gene position: 2396925-2395924 (Counterclockwise)
Preceding gene: 159898487
Following gene: 159898480
Centisome position: 37.77
GC content: 51.7
Gene sequence:
>1002_bases ATGTCGCAACCAATTAATCAATTACCCTGGGAGCATGCCGATTGGTTCGACCGTTTGAGCACATGGATTGAGCAGCAGTT AGCGAGCCATCAACGCAGCATGCTTGAGCCAATTCAACTCGTACATCAACGCCCATGGTCGGCCTTTGCCCAAATCCAGA CTAATCAAGGTATGGTCTATTGCAAAGCGCCAGCTCCAGCCTTCCACTATGAAGCGGCCTTGACCCAAGCCTTGGCCGAT TGGCAACCTGATTGCAATGTGCCAGTTTTAGCGATCGAACCAACCCAGGCTTGGATTCTCTCAGCCGATGCTGGCACAAC CTTACGTCAACTTGGCCAAAATCTGACCCAGCTTGAGCATTGGTATGCGTTGTTGCCACAGTACAGCGAGCTACAAATAA ACCTCGCTCAACGGGTTCCAGCTTTGTTAGCACTCGGCGTTCCCGATCGGCGATTAAGCCAGTTCCCAACGTTGTTTCGC GAACTCTTGAACGATCGCCAGCATTTATTGATTGATCAAGAACTTGGCTTGAGTAGCAGCGAATATCAACAATTGCAAGC ATTAGCGCCAATGGTACAAGCACAGGCTGCCCAATTAGCCGAATTTGGCTTGCCAGAAACGCTGACCCACGAAGAAATTC ATGAAAATAATGTGCTTTACGGCGAGCGCGGCTATACCTTTACCGATTGGAGCGATTGCAGCGTGAGCCATCCCTTTTTT TCGCTGCTAGTCACGTTGCGAGCCGCTGCCCATTGGCTCAAGCTCGATGAGCATGGCCCCGAGTTACAACGGCTGCGTGC TGCCTATTTGGAGCCATGGACACGCTTTGCGCCGCGCTCGCAGCTTGATCAAGCGGTGGAGATTGCCTATCGGCTTGGGA TGATCAATCGGGCGCTTTCGTGGCGGCAAGCCTTGGACGGCCTCGATCCAGCTCAAACGCAAGAGTATCAAGATAATGTC GCAGGCTGGCTCCAAGATTATTTAACAGCCAATACGGCTTAA
Upstream 100 bases:
>100_bases CAAAACATCGACTAGGCAGTTCGATTGTCGGCCCTCCGTTGGATACCGCTCAATCCTGGTTGGGGTAACATACACCCGGC AAACGTAGCAGGAGTAAGTT
Downstream 100 bases:
>100_bases AGCCAACCCACACCTCACCCCAACCCCTCTCCCACGGCGGCGGGAGAGGGGCGTTCTAATGATCATGAGGGATGGTTTCC CCCTCGCCTCGCGTGCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSQPINQLPWEHADWFDRLSTWIEQQLASHQRSMLEPIQLVHQRPWSAFAQIQTNQGMVYCKAPAPAFHYEAALTQALAD WQPDCNVPVLAIEPTQAWILSADAGTTLRQLGQNLTQLEHWYALLPQYSELQINLAQRVPALLALGVPDRRLSQFPTLFR ELLNDRQHLLIDQELGLSSSEYQQLQALAPMVQAQAAQLAEFGLPETLTHEEIHENNVLYGERGYTFTDWSDCSVSHPFF SLLVTLRAAAHWLKLDEHGPELQRLRAAYLEPWTRFAPRSQLDQAVEIAYRLGMINRALSWRQALDGLDPAQTQEYQDNV AGWLQDYLTANTA
Sequences:
>Translated_333_residues MSQPINQLPWEHADWFDRLSTWIEQQLASHQRSMLEPIQLVHQRPWSAFAQIQTNQGMVYCKAPAPAFHYEAALTQALAD WQPDCNVPVLAIEPTQAWILSADAGTTLRQLGQNLTQLEHWYALLPQYSELQINLAQRVPALLALGVPDRRLSQFPTLFR ELLNDRQHLLIDQELGLSSSEYQQLQALAPMVQAQAAQLAEFGLPETLTHEEIHENNVLYGERGYTFTDWSDCSVSHPFF SLLVTLRAAAHWLKLDEHGPELQRLRAAYLEPWTRFAPRSQLDQAVEIAYRLGMINRALSWRQALDGLDPAQTQEYQDNV AGWLQDYLTANTA >Mature_332_residues SQPINQLPWEHADWFDRLSTWIEQQLASHQRSMLEPIQLVHQRPWSAFAQIQTNQGMVYCKAPAPAFHYEAALTQALADW QPDCNVPVLAIEPTQAWILSADAGTTLRQLGQNLTQLEHWYALLPQYSELQINLAQRVPALLALGVPDRRLSQFPTLFRE LLNDRQHLLIDQELGLSSSEYQQLQALAPMVQAQAAQLAEFGLPETLTHEEIHENNVLYGERGYTFTDWSDCSVSHPFFS LLVTLRAAAHWLKLDEHGPELQRLRAAYLEPWTRFAPRSQLDQAVEIAYRLGMINRALSWRQALDGLDPAQTQEYQDNVA GWLQDYLTANTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38059; Mature: 37928
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPINQLPWEHADWFDRLSTWIEQQLASHQRSMLEPIQLVHQRPWSAFAQIQTNQGMVY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCEEE CKAPAPAFHYEAALTQALADWQPDCNVPVLAIEPTQAWILSADAGTTLRQLGQNLTQLEH ECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH WYALLPQYSELQINLAQRVPALLALGVPDRRLSQFPTLFRELLNDRQHLLIDQELGLSSS HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEEECHHCCCCHH EYQQLQALAPMVQAQAAQLAEFGLPETLTHEEIHENNVLYGERGYTFTDWSDCSVSHPFF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEECCCCCEECCCCCCCCCCHHH SLLVTLRAAAHWLKLDEHGPELQRLRAAYLEPWTRFAPRSQLDQAVEIAYRLGMINRALS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH WRQALDGLDPAQTQEYQDNVAGWLQDYLTANTA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQPINQLPWEHADWFDRLSTWIEQQLASHQRSMLEPIQLVHQRPWSAFAQIQTNQGMVY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCEEE CKAPAPAFHYEAALTQALADWQPDCNVPVLAIEPTQAWILSADAGTTLRQLGQNLTQLEH ECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH WYALLPQYSELQINLAQRVPALLALGVPDRRLSQFPTLFRELLNDRQHLLIDQELGLSSS HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEEECHHCCCCHH EYQQLQALAPMVQAQAAQLAEFGLPETLTHEEIHENNVLYGERGYTFTDWSDCSVSHPFF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEECCCCCEECCCCCCCCCCHHH SLLVTLRAAAHWLKLDEHGPELQRLRAAYLEPWTRFAPRSQLDQAVEIAYRLGMINRALS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH WRQALDGLDPAQTQEYQDNVAGWLQDYLTANTA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA