| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898479
Identifier: 159898479
GI number: 159898479
Start: 2374895
End: 2377255
Strand: Reverse
Name: 159898479
Synonym: Haur_1955
Alternate gene names: NA
Gene position: 2377255-2374895 (Counterclockwise)
Preceding gene: 159898480
Following gene: 159898478
Centisome position: 37.46
GC content: 53.03
Gene sequence:
>2361_bases ATGGTGTATAGCCCAACGCCAATTGAGCAAAGTACCTTCGCCACCATACAAGCCCGCCTGATCGAGCTATTGCTACGCCA CAATCAGGCCAATTTTCAGCAGTTTGTTGCGGCATTCGCAGGCTTTGCGATTGAAGATGACCCAACGCTGACCCGCTATC GCGATTTAGCCACCATGTTTCATCTACGCGATGAGCTGTTTGAGCATATTCTGCCGCGCATCGTGCGTCGCCTCAGTTTT GCCGCGCCGCGCAGTTTGGTGGTTGAAGAACCACCAGCTCGCGGCCAGATCGACTGGGATCGCACGCTAGCAGCAACCTG GGATGAACGGCCAGGCGAGCCGCCCTTAACCATGGTCACTCGCCAACAACGCCGCGATTTTGCAATTCCCGAGAATTTGC TGACGGTTGTGGCCCTGCTGGAATATCATCAATTGGGCGAAGCATTGCTTTGGGATGAAAATCTCGCGGTTGGGGCGGCG GCCTTGCGTCACCCACTGACCGAGATTGTAGAACGCTGCGAGCGTGAGTTGGCATTTCCACAATTTGCCAGCTTGCGCAG CCAAGCCACCCAGATTATCGCTGGGCTGCATAGCGAATATTCCGATGGCCCAAATTTGGTGCTACACGTCAGCAATAATT TAATTCCTGGCAGCAACAGCGCCTACCAAGATCTGATCGAATGGTATCAGCGGCTGCACAATCTCCAGTTACTGCGGCGG CTCCCAACCAGCCCCGATCACGATCTATTGGGCAGCAACCCCGATCGCGACAATTATCTCTATCAGCTCTGGATTTTCTA CGAGCTAGCCGATTTATTAACTGAACAGCAAAAGCTTGAGCTGATTGTTTACCCAAAAGTTAAAGCCAGCGTGCGACTCC AATTTCGCTGGGGTTCGGGCGACGACGAGGTGCGCTACGAATTGCGCCACGATCAAGCTGTGCCTAATCCAAGCGCCAAC TGGACCACCAGTGCAGCTCGCGACCAAGTGCCGAACGTGCGGCCCGACTTTTATCTGACCCGTATCCATCCCCCCATGCT CAAAATAGTCCATGAGGGGCAACAATTTTGGCGCGAGCCAGGCATCATCTGGGATGCCAAATACTACCGACCATTTGATC TTGATCAGCCGCATAAAGTTCCGGCTGAGCCAATCAAGCGCATGATTGCCGATCTGGCGCTGTTGGGCGAGGAGCATGGC ACGCTGCTGTTTGCTTTTTTGCGGCCCAATACGAATGATCACAGCGAGCAAGCTGCCAACAGCGGCCCATCAACCGCAAA CTATAGGATTACTCCAGCGCCAGGCTTAGCCCACAATGTGATGCCCACCCAAGCGGTGCATTTACACCAACTTCAGCCGC AAAGCAGCAATCAATTAACCAACGTCCAGCAAACCCTGATCGAGCTGCTGGAAACAGCCCACAAGCAGCTGAGCCAACCG CGCCAGATCGCCTGTCATGGGATGTTTCTTGATACCCTCAGCACCACCGATCGCTTGCCGTTGCTGGCAAGGTATGGCAT TGCTGGCAACGAGCTTGATGAAGTTGTGCTCTGCCCCAAACCCCATATTGGTGAGTGGCGCATTGATCTAGTGCATCGTG GGCGGCAATGTTGTGAAGATCCCCATGTTTGTCAGATTATCGGCTGGCCCAATCGCCGCAAGCCAATTCGCCCCTTGCGC ACCGCCGCCGATCTGCTCAACGAACTCAAACATATTCTCGCCACCACCGATGAACTCGATGAGCAAACCCTGGCTCGCAT CGTGAAAGAGGTCGAATCGCTAACTCGTCAGTTTGCCAGCATCAACAACATCCAATGGGAATACTACTTCAATCGAGTGC GTGATCTAGGGATGCGCCAAACCTTTGATCGGCTTGATACCTATGCCAAAGAGTCGTTGGCGCTCGCGATCTTCCTGACC GATCAGCTTGATAGCATCAATGCGCCCGATTTTTCGGCTCCGGCGATTCACATTGGCAGCGTGATGGAGCGTATGCTCAA AGAACGAGTTTTCACAGGGGTCAGGCTGCTAGGCGATTTGGCCAGACCACATAACCAGACTATGGGCAAACTGACCTTTT TAGAATACAAACCATGGGCCGATCAAGCCAATTGGGACTTGATTACGAAGCATGTGAAGCGCCATTGGCAGCCTGAAGTA ACATTTAACGAAATGGACTATAGCTTCAATTTCATTAAATTTATTCAGTTGCTCAATCGGGTTAAAGATGCTCGCAACAA TGCCGCCCACGTGGAACCTGTTTCGCGGACCGCCTATGGTGCGATGCAAGACCTCGTTTGCCAAATGAGTCCGCTTGGGC GTGGGTTGCTTGATGTGTTGTTACTTGCGTGGCAAGGATAG
Upstream 100 bases:
>100_bases ACATTAGCCAAATTTTTGATCTCGGCACAGAATTGCTGCTCGATCAAACCAGTCAATTTGCCCAACGCTTGCGCACGTTC AGCAGCGAACGAGGCCTGTG
Downstream 100 bases:
>100_bases TGTTCCCTCACCCCCTAGCACCCTCTCCCGCAGGCGAGCGAGGGGGAACTACTAAACCAAAGGCTCCCCTCGCCCGCCGC AGTGGGAGAGGGGTCGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 786; Mature: 786
Protein sequence:
>786_residues MVYSPTPIEQSTFATIQARLIELLLRHNQANFQQFVAAFAGFAIEDDPTLTRYRDLATMFHLRDELFEHILPRIVRRLSF AAPRSLVVEEPPARGQIDWDRTLAATWDERPGEPPLTMVTRQQRRDFAIPENLLTVVALLEYHQLGEALLWDENLAVGAA ALRHPLTEIVERCERELAFPQFASLRSQATQIIAGLHSEYSDGPNLVLHVSNNLIPGSNSAYQDLIEWYQRLHNLQLLRR LPTSPDHDLLGSNPDRDNYLYQLWIFYELADLLTEQQKLELIVYPKVKASVRLQFRWGSGDDEVRYELRHDQAVPNPSAN WTTSAARDQVPNVRPDFYLTRIHPPMLKIVHEGQQFWREPGIIWDAKYYRPFDLDQPHKVPAEPIKRMIADLALLGEEHG TLLFAFLRPNTNDHSEQAANSGPSTANYRITPAPGLAHNVMPTQAVHLHQLQPQSSNQLTNVQQTLIELLETAHKQLSQP RQIACHGMFLDTLSTTDRLPLLARYGIAGNELDEVVLCPKPHIGEWRIDLVHRGRQCCEDPHVCQIIGWPNRRKPIRPLR TAADLLNELKHILATTDELDEQTLARIVKEVESLTRQFASINNIQWEYYFNRVRDLGMRQTFDRLDTYAKESLALAIFLT DQLDSINAPDFSAPAIHIGSVMERMLKERVFTGVRLLGDLARPHNQTMGKLTFLEYKPWADQANWDLITKHVKRHWQPEV TFNEMDYSFNFIKFIQLLNRVKDARNNAAHVEPVSRTAYGAMQDLVCQMSPLGRGLLDVLLLAWQG
Sequences:
>Translated_786_residues MVYSPTPIEQSTFATIQARLIELLLRHNQANFQQFVAAFAGFAIEDDPTLTRYRDLATMFHLRDELFEHILPRIVRRLSF AAPRSLVVEEPPARGQIDWDRTLAATWDERPGEPPLTMVTRQQRRDFAIPENLLTVVALLEYHQLGEALLWDENLAVGAA ALRHPLTEIVERCERELAFPQFASLRSQATQIIAGLHSEYSDGPNLVLHVSNNLIPGSNSAYQDLIEWYQRLHNLQLLRR LPTSPDHDLLGSNPDRDNYLYQLWIFYELADLLTEQQKLELIVYPKVKASVRLQFRWGSGDDEVRYELRHDQAVPNPSAN WTTSAARDQVPNVRPDFYLTRIHPPMLKIVHEGQQFWREPGIIWDAKYYRPFDLDQPHKVPAEPIKRMIADLALLGEEHG TLLFAFLRPNTNDHSEQAANSGPSTANYRITPAPGLAHNVMPTQAVHLHQLQPQSSNQLTNVQQTLIELLETAHKQLSQP RQIACHGMFLDTLSTTDRLPLLARYGIAGNELDEVVLCPKPHIGEWRIDLVHRGRQCCEDPHVCQIIGWPNRRKPIRPLR TAADLLNELKHILATTDELDEQTLARIVKEVESLTRQFASINNIQWEYYFNRVRDLGMRQTFDRLDTYAKESLALAIFLT DQLDSINAPDFSAPAIHIGSVMERMLKERVFTGVRLLGDLARPHNQTMGKLTFLEYKPWADQANWDLITKHVKRHWQPEV TFNEMDYSFNFIKFIQLLNRVKDARNNAAHVEPVSRTAYGAMQDLVCQMSPLGRGLLDVLLLAWQG >Mature_786_residues MVYSPTPIEQSTFATIQARLIELLLRHNQANFQQFVAAFAGFAIEDDPTLTRYRDLATMFHLRDELFEHILPRIVRRLSF AAPRSLVVEEPPARGQIDWDRTLAATWDERPGEPPLTMVTRQQRRDFAIPENLLTVVALLEYHQLGEALLWDENLAVGAA ALRHPLTEIVERCERELAFPQFASLRSQATQIIAGLHSEYSDGPNLVLHVSNNLIPGSNSAYQDLIEWYQRLHNLQLLRR LPTSPDHDLLGSNPDRDNYLYQLWIFYELADLLTEQQKLELIVYPKVKASVRLQFRWGSGDDEVRYELRHDQAVPNPSAN WTTSAARDQVPNVRPDFYLTRIHPPMLKIVHEGQQFWREPGIIWDAKYYRPFDLDQPHKVPAEPIKRMIADLALLGEEHG TLLFAFLRPNTNDHSEQAANSGPSTANYRITPAPGLAHNVMPTQAVHLHQLQPQSSNQLTNVQQTLIELLETAHKQLSQP RQIACHGMFLDTLSTTDRLPLLARYGIAGNELDEVVLCPKPHIGEWRIDLVHRGRQCCEDPHVCQIIGWPNRRKPIRPLR TAADLLNELKHILATTDELDEQTLARIVKEVESLTRQFASINNIQWEYYFNRVRDLGMRQTFDRLDTYAKESLALAIFLT DQLDSINAPDFSAPAIHIGSVMERMLKERVFTGVRLLGDLARPHNQTMGKLTFLEYKPWADQANWDLITKHVKRHWQPEV TFNEMDYSFNFIKFIQLLNRVKDARNNAAHVEPVSRTAYGAMQDLVCQMSPLGRGLLDVLLLAWQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90306; Mature: 90306
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYSPTPIEQSTFATIQARLIELLLRHNQANFQQFVAAFAGFAIEDDPTLTRYRDLATMF CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH HLRDELFEHILPRIVRRLSFAAPRSLVVEEPPARGQIDWDRTLAATWDERPGEPPLTMVT HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RQQRRDFAIPENLLTVVALLEYHQLGEALLWDENLAVGAAALRHPLTEIVERCERELAFP HHHHCCCCCCHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCH QFASLRSQATQIIAGLHSEYSDGPNLVLHVSNNLIPGSNSAYQDLIEWYQRLHNLQLLRR HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LPTSPDHDLLGSNPDRDNYLYQLWIFYELADLLTEQQKLELIVYPKVKASVRLQFRWGSG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCEEEEEECCCEEEEEEEEECCC DDEVRYELRHDQAVPNPSANWTTSAARDQVPNVRPDFYLTRIHPPMLKIVHEGQQFWREP CCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCC GIIWDAKYYRPFDLDQPHKVPAEPIKRMIADLALLGEEHGTLLFAFLRPNTNDHSEQAAN CCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHC SGPSTANYRITPAPGLAHNVMPTQAVHLHQLQPQSSNQLTNVQQTLIELLETAHKQLSQP CCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC RQIACHGMFLDTLSTTDRLPLLARYGIAGNELDEVVLCPKPHIGEWRIDLVHRGRQCCED HHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHCCC PHVCQIIGWPNRRKPIRPLRTAADLLNELKHILATTDELDEQTLARIVKEVESLTRQFAS CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH INNIQWEYYFNRVRDLGMRQTFDRLDTYAKESLALAIFLTDQLDSINAPDFSAPAIHIGS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHH VMERMLKERVFTGVRLLGDLARPHNQTMGKLTFLEYKPWADQANWDLITKHVKRHWQPEV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC TFNEMDYSFNFIKFIQLLNRVKDARNNAAHVEPVSRTAYGAMQDLVCQMSPLGRGLLDVL EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH LLAWQG HHHCCC >Mature Secondary Structure MVYSPTPIEQSTFATIQARLIELLLRHNQANFQQFVAAFAGFAIEDDPTLTRYRDLATMF CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH HLRDELFEHILPRIVRRLSFAAPRSLVVEEPPARGQIDWDRTLAATWDERPGEPPLTMVT HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RQQRRDFAIPENLLTVVALLEYHQLGEALLWDENLAVGAAALRHPLTEIVERCERELAFP HHHHCCCCCCHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCH QFASLRSQATQIIAGLHSEYSDGPNLVLHVSNNLIPGSNSAYQDLIEWYQRLHNLQLLRR HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LPTSPDHDLLGSNPDRDNYLYQLWIFYELADLLTEQQKLELIVYPKVKASVRLQFRWGSG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCEEEEEECCCEEEEEEEEECCC DDEVRYELRHDQAVPNPSANWTTSAARDQVPNVRPDFYLTRIHPPMLKIVHEGQQFWREP CCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCC GIIWDAKYYRPFDLDQPHKVPAEPIKRMIADLALLGEEHGTLLFAFLRPNTNDHSEQAAN CCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHC SGPSTANYRITPAPGLAHNVMPTQAVHLHQLQPQSSNQLTNVQQTLIELLETAHKQLSQP CCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC RQIACHGMFLDTLSTTDRLPLLARYGIAGNELDEVVLCPKPHIGEWRIDLVHRGRQCCED HHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHCCC PHVCQIIGWPNRRKPIRPLRTAADLLNELKHILATTDELDEQTLARIVKEVESLTRQFAS CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH INNIQWEYYFNRVRDLGMRQTFDRLDTYAKESLALAIFLTDQLDSINAPDFSAPAIHIGS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHH VMERMLKERVFTGVRLLGDLARPHNQTMGKLTFLEYKPWADQANWDLITKHVKRHWQPEV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC TFNEMDYSFNFIKFIQLLNRVKDARNNAAHVEPVSRTAYGAMQDLVCQMSPLGRGLLDVL EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH LLAWQG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA