Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yfeW [C]

Identifier: 159898473

GI number: 159898473

Start: 2362045

End: 2363505

Strand: Direct

Name: yfeW [C]

Synonym: Haur_1949

Alternate gene names: 159898473

Gene position: 2362045-2363505 (Clockwise)

Preceding gene: 159898472

Following gene: 159898477

Centisome position: 37.22

GC content: 49.69

Gene sequence:

>1461_bases
ATGTTTCCAATTAGCGACTATAAGCTTCCGCGAGCCACGCCCGAAGCACAAGGCATTGCATCGGCGGCGTTGCTTCAATT
TATCGAGGCCATGGATACCCACGTTAATCAAATCCATAGTTTGATGCTGCTGCGTCATGGTCATGTGGTTGCTGAAGCTT
GGTGGTCGCCGTATGCGCCTGCCTATCCGCAGCTTTTATTTTCGCTGAGCAAAAGTTTTACCGCAACGGCGGTTGGGCTA
GCGATCGCCGAAGGCTACTTTGCTATCGATGATCCGGTTATATCCTTCTTTCCTGAGCACACTCCTGCGGAATGTAGCCC
TATGCTTGCAGCGATGCGCGTTCGCGATTTGTTATCGATGGCAACTGGCCACGCTGATGATCCATGGGTATCGATGATTT
CACGTCAGGATGGCAACTGGATTAAGGGCTTTCTTGAAACTCCAGTTGTTTATGCCCCAGGCACCCATTTTGTGTACAAT
ACAAGCGCCACCTATATGCTGTCGGCAATTGTGCAGCAAACAACGACAATTCGGCTCGATGAATATTTGAAACCACGGCT
ATTTGAACCATTGGGAATTGAGCATGTTGATTGGCACATATCGCCGCAAGGAATAACGCTGGGGGGAATTGGGCTAAGCC
TGACCACCGAAGCAGTTGCCCGCTTTGGTCAGCTTTATTTGCAAAAAGGTTGCTGGAATGGGATTCAGCTTTTGCCAGAG
GCATGGGTTGGGCAAGCTAGCGCCATGCAAATAATCAACGGCGCTGATCCACATTCTGATTGGGCGCAGGGCTATGGCTA
TCAATTTTGGCGCTGCCGTCATGGAGCCTATCGTGGCGATGGGGTGTTTGGGCAATATTGTATTGTTATGCCCGAGCAGG
ATGCGGTGCTTGTGATCACGGGAGGGGTGGATGTCTTTGCGATGCAGCAACCATTGAATCTGGTTTGGGAATATTTGCTG
CCCGCGATGCAAGCCGAGCGCTTGATAGACGATACGCTAGCGCAACGGCAACTAACAGAAAAACTTGCCAACTTACAGGT
TCCAACTATCCACGGCGAATCCAGCGCGGCAATTGCCCAACATGTCTCTGGCCGAAGCTATCAGGTTGATTCGAATAGCT
TCATGATTGAACGTATCAGCTTTGATTTTAGCGCAACTGGCTGTTCGGTTGTTGTCCAAACAGCGACGGCAACTGAAACA
ATTGTTTGTGGGTATCGCACATGGTCATTGGGTCGCAGCAGCCTCTTTGCGCAACACTTTTTTGATGACACCCCAGTGAT
GGCTTACGGTGCTTGGACTGCCCCAGATCGGTTTACCATGGTTGTGCGGCTCTATCAAACTCCATTTGTTTACACGATGG
AATATCATTTTGTAGACGCTGAATTGCTAATGACGATTCAAATCAATGTCTCGTTTGATTCGTTAGCTCCGCTTGTGCTG
ACTGCGCGGCAGGTAACTTAA

Upstream 100 bases:

>100_bases
GAATAACCTGCATTATCAGTTACTTGGAGCGGCAGTCTTTACAAAGACTGCCGCTTTTGTGTATGCTCAAATTAATTAAC
CTGCAATAGGAGCATAATCA

Downstream 100 bases:

>100_bases
GCTGATGTGGATTTAGCGCCAGCGTTGTAATGCGCCATGAAAACAAATATGCATTAGGTACTCCTTTAATTACAAGGCTT
GAAAGTAGCGGGCAATTGGC

Product: beta-lactamase

Products: NA

Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Family Protein; Beta-Lactamase Class C; 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolase; Secreted Beta-Lactamase Family Protein; Hydrolase Transmembrane Protein; Membrane Or Secreted Beta-Lactamase Family Protein; Exported 6-Aminohexanoate-Dimer Hydrolase Protein; Beta-Lactamase Class C-Like Protein; Beta-Lactamase Class C Family Protein; Beta-Lactamase Class C Protein; Beta-Lactamase-Like Hydrolase

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MFPISDYKLPRATPEAQGIASAALLQFIEAMDTHVNQIHSLMLLRHGHVVAEAWWSPYAPAYPQLLFSLSKSFTATAVGL
AIAEGYFAIDDPVISFFPEHTPAECSPMLAAMRVRDLLSMATGHADDPWVSMISRQDGNWIKGFLETPVVYAPGTHFVYN
TSATYMLSAIVQQTTTIRLDEYLKPRLFEPLGIEHVDWHISPQGITLGGIGLSLTTEAVARFGQLYLQKGCWNGIQLLPE
AWVGQASAMQIINGADPHSDWAQGYGYQFWRCRHGAYRGDGVFGQYCIVMPEQDAVLVITGGVDVFAMQQPLNLVWEYLL
PAMQAERLIDDTLAQRQLTEKLANLQVPTIHGESSAAIAQHVSGRSYQVDSNSFMIERISFDFSATGCSVVVQTATATET
IVCGYRTWSLGRSSLFAQHFFDDTPVMAYGAWTAPDRFTMVVRLYQTPFVYTMEYHFVDAELLMTIQINVSFDSLAPLVL
TARQVT

Sequences:

>Translated_486_residues
MFPISDYKLPRATPEAQGIASAALLQFIEAMDTHVNQIHSLMLLRHGHVVAEAWWSPYAPAYPQLLFSLSKSFTATAVGL
AIAEGYFAIDDPVISFFPEHTPAECSPMLAAMRVRDLLSMATGHADDPWVSMISRQDGNWIKGFLETPVVYAPGTHFVYN
TSATYMLSAIVQQTTTIRLDEYLKPRLFEPLGIEHVDWHISPQGITLGGIGLSLTTEAVARFGQLYLQKGCWNGIQLLPE
AWVGQASAMQIINGADPHSDWAQGYGYQFWRCRHGAYRGDGVFGQYCIVMPEQDAVLVITGGVDVFAMQQPLNLVWEYLL
PAMQAERLIDDTLAQRQLTEKLANLQVPTIHGESSAAIAQHVSGRSYQVDSNSFMIERISFDFSATGCSVVVQTATATET
IVCGYRTWSLGRSSLFAQHFFDDTPVMAYGAWTAPDRFTMVVRLYQTPFVYTMEYHFVDAELLMTIQINVSFDSLAPLVL
TARQVT
>Mature_486_residues
MFPISDYKLPRATPEAQGIASAALLQFIEAMDTHVNQIHSLMLLRHGHVVAEAWWSPYAPAYPQLLFSLSKSFTATAVGL
AIAEGYFAIDDPVISFFPEHTPAECSPMLAAMRVRDLLSMATGHADDPWVSMISRQDGNWIKGFLETPVVYAPGTHFVYN
TSATYMLSAIVQQTTTIRLDEYLKPRLFEPLGIEHVDWHISPQGITLGGIGLSLTTEAVARFGQLYLQKGCWNGIQLLPE
AWVGQASAMQIINGADPHSDWAQGYGYQFWRCRHGAYRGDGVFGQYCIVMPEQDAVLVITGGVDVFAMQQPLNLVWEYLL
PAMQAERLIDDTLAQRQLTEKLANLQVPTIHGESSAAIAQHVSGRSYQVDSNSFMIERISFDFSATGCSVVVQTATATET
IVCGYRTWSLGRSSLFAQHFFDDTPVMAYGAWTAPDRFTMVVRLYQTPFVYTMEYHFVDAELLMTIQINVSFDSLAPLVL
TARQVT

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54037; Mature: 54037

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPISDYKLPRATPEAQGIASAALLQFIEAMDTHVNQIHSLMLLRHGHVVAEAWWSPYAP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC
AYPQLLFSLSKSFTATAVGLAIAEGYFAIDDPVISFFPEHTPAECSPMLAAMRVRDLLSM
HHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ATGHADDPWVSMISRQDGNWIKGFLETPVVYAPGTHFVYNTSATYMLSAIVQQTTTIRLD
HCCCCCCHHHHHHHCCCCCHHHHHHCCCEEEECCCCEEECCCHHHHHHHHHHHHHEEEHH
EYLKPRLFEPLGIEHVDWHISPQGITLGGIGLSLTTEAVARFGQLYLQKGCWNGIQLLPE
HHCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AWVGQASAMQIINGADPHSDWAQGYGYQFWRCRHGAYRGDGVFGQYCIVMPEQDAVLVIT
HHCCCHHHHHHHCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEE
GGVDVFAMQQPLNLVWEYLLPAMQAERLIDDTLAQRQLTEKLANLQVPTIHGESSAAIAQ
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH
HVSGRSYQVDSNSFMIERISFDFSATGCSVVVQTATATETIVCGYRTWSLGRSSLFAQHF
HCCCCEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHH
FDDTPVMAYGAWTAPDRFTMVVRLYQTPFVYTMEYHFVDAELLMTIQINVSFDSLAPLVL
CCCCCEEEEECCCCCCHHEEEEEEECCCEEEEEEEEEECEEEEEEEEEEECHHHHCHHHH
TARQVT
EEECCC
>Mature Secondary Structure
MFPISDYKLPRATPEAQGIASAALLQFIEAMDTHVNQIHSLMLLRHGHVVAEAWWSPYAP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC
AYPQLLFSLSKSFTATAVGLAIAEGYFAIDDPVISFFPEHTPAECSPMLAAMRVRDLLSM
HHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ATGHADDPWVSMISRQDGNWIKGFLETPVVYAPGTHFVYNTSATYMLSAIVQQTTTIRLD
HCCCCCCHHHHHHHCCCCCHHHHHHCCCEEEECCCCEEECCCHHHHHHHHHHHHHEEEHH
EYLKPRLFEPLGIEHVDWHISPQGITLGGIGLSLTTEAVARFGQLYLQKGCWNGIQLLPE
HHCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AWVGQASAMQIINGADPHSDWAQGYGYQFWRCRHGAYRGDGVFGQYCIVMPEQDAVLVIT
HHCCCHHHHHHHCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEE
GGVDVFAMQQPLNLVWEYLLPAMQAERLIDDTLAQRQLTEKLANLQVPTIHGESSAAIAQ
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH
HVSGRSYQVDSNSFMIERISFDFSATGCSVVVQTATATETIVCGYRTWSLGRSSLFAQHF
HCCCCEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHH
FDDTPVMAYGAWTAPDRFTMVVRLYQTPFVYTMEYHFVDAELLMTIQINVSFDSLAPLVL
CCCCCEEEEECCCCCCHHEEEEEEECCCEEEEEEEEEECEEEEEEEEEEECHHHHCHHHH
TARQVT
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA