| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898477
Identifier: 159898477
GI number: 159898477
Start: 2369039
End: 2369425
Strand: Direct
Name: 159898477
Synonym: Haur_1953
Alternate gene names: NA
Gene position: 2369039-2369425 (Clockwise)
Preceding gene: 159898473
Following gene: 159898481
Centisome position: 37.33
GC content: 47.8
Gene sequence:
>387_bases ATGGCGGATATTGAAAAGGTATCGATGAATTTGAGTGTCGTCGATTTAGGGCAAATCGATTTATTGGTTGATCAGGGCTT TTATTCGAGCCGAACTGATTTTTTTCGCGCAGCGATTCGGACGCGGCTGGCTGGCCATGATGAGGCGATTAAGCAAGCAG TTGTACGTACCTCTTCGGTGATCGGCGTGATTTCGTTTGACCGTGAGCACTTAGAACGGATACAGCGCAATAATGAACAA GTGCGGGTTGTGGTGGTAGGGTTGCTCATTTTGAGTAATGATATTTCACCAGAGTTAGCCCAAGCCACGATCAAATCGCT TAAAGTCTATGGCTCGTTGCGAGCAAGCGCCGCAGTCAAAGAGGCCTTAGCCGAGCGGATTAATTAG
Upstream 100 bases:
>100_bases TAAATGAAGCTTTTGCTCTGCTGTGGAAATTAGGGCTTGACAGATTTATAATCCCTATGTATTCTATTTGTATTCCAATT GGAATATTTTTGGGGGATGC
Downstream 100 bases:
>100_bases TTCAGGCACACGATTCTAAACTCTGGGGCAAAAACGTTGCTTAGTAATTAAGGAGAACCATATGTTCATCCGCACGATCG TGATCACGGTATAGGGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator CopG/Arc/MetJ Family; Transcriptional Regulator CopG Family; Transcription Regulator; CopG/Arc/MetJ Family Transcriptional Regulator; CopG/Arc/MetJ Family Transcriptional Regulator
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSVIGVISFDREHLERIQRNNEQ VRVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVKEALAERIN
Sequences:
>Translated_128_residues MADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSVIGVISFDREHLERIQRNNEQ VRVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVKEALAERIN >Mature_127_residues ADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSVIGVISFDREHLERIQRNNEQV RVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVKEALAERIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14137; Mature: 14006
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSV CCCHHHHHCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IGVISFDREHLERIQRNNEQVRVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVK HEEEECCHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EALAERIN HHHHHHCC >Mature Secondary Structure ADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSV CCHHHHHCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IGVISFDREHLERIQRNNEQVRVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVK HEEEECCHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EALAERIN HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA