Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898477

Identifier: 159898477

GI number: 159898477

Start: 2369039

End: 2369425

Strand: Direct

Name: 159898477

Synonym: Haur_1953

Alternate gene names: NA

Gene position: 2369039-2369425 (Clockwise)

Preceding gene: 159898473

Following gene: 159898481

Centisome position: 37.33

GC content: 47.8

Gene sequence:

>387_bases
ATGGCGGATATTGAAAAGGTATCGATGAATTTGAGTGTCGTCGATTTAGGGCAAATCGATTTATTGGTTGATCAGGGCTT
TTATTCGAGCCGAACTGATTTTTTTCGCGCAGCGATTCGGACGCGGCTGGCTGGCCATGATGAGGCGATTAAGCAAGCAG
TTGTACGTACCTCTTCGGTGATCGGCGTGATTTCGTTTGACCGTGAGCACTTAGAACGGATACAGCGCAATAATGAACAA
GTGCGGGTTGTGGTGGTAGGGTTGCTCATTTTGAGTAATGATATTTCACCAGAGTTAGCCCAAGCCACGATCAAATCGCT
TAAAGTCTATGGCTCGTTGCGAGCAAGCGCCGCAGTCAAAGAGGCCTTAGCCGAGCGGATTAATTAG

Upstream 100 bases:

>100_bases
TAAATGAAGCTTTTGCTCTGCTGTGGAAATTAGGGCTTGACAGATTTATAATCCCTATGTATTCTATTTGTATTCCAATT
GGAATATTTTTGGGGGATGC

Downstream 100 bases:

>100_bases
TTCAGGCACACGATTCTAAACTCTGGGGCAAAAACGTTGCTTAGTAATTAAGGAGAACCATATGTTCATCCGCACGATCG
TGATCACGGTATAGGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator CopG/Arc/MetJ Family; Transcriptional Regulator CopG Family; Transcription Regulator; CopG/Arc/MetJ Family Transcriptional Regulator; CopG/Arc/MetJ Family Transcriptional Regulator

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSVIGVISFDREHLERIQRNNEQ
VRVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVKEALAERIN

Sequences:

>Translated_128_residues
MADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSVIGVISFDREHLERIQRNNEQ
VRVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVKEALAERIN
>Mature_127_residues
ADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSVIGVISFDREHLERIQRNNEQV
RVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVKEALAERIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14137; Mature: 14006

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSV
CCCHHHHHCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IGVISFDREHLERIQRNNEQVRVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVK
HEEEECCHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EALAERIN
HHHHHHCC
>Mature Secondary Structure 
ADIEKVSMNLSVVDLGQIDLLVDQGFYSSRTDFFRAAIRTRLAGHDEAIKQAVVRTSSV
CCHHHHHCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IGVISFDREHLERIQRNNEQVRVVVVGLLILSNDISPELAQATIKSLKVYGSLRASAAVK
HEEEECCHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EALAERIN
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA