| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898109
Identifier: 159898109
GI number: 159898109
Start: 1840013
End: 1840879
Strand: Direct
Name: 159898109
Synonym: Haur_1585
Alternate gene names: NA
Gene position: 1840013-1840879 (Clockwise)
Preceding gene: 159898108
Following gene: 159898110
Centisome position: 28.99
GC content: 49.48
Gene sequence:
>867_bases ATGGCAACTCCCGTATCTCAAGAAACCAAAACTGATTTGAAAGACGTGAAGCCTCAAGCTCCGGCAGTTCCGTTGCTCTG GCGGCAGTTGTGGATCGCTGGCTTGCTAACTGGCTTGGTCTGGTGTTTGGTAATTTTCGCCCCATTCTCCTACATGATTT ATTTGGCTGGGGTGATTCCAATTGGCGGTGGGATTTATTTGGGTCGTAAGATTCAGGGCCGTGCGTTGGTGCATGGGGTG ATTTTTTCGCTGATTGCTAGTGCTACAGCCTTGCTAATTGGCTCGATTTTAGTCTTTACTCTAAGCGCCAAACCAGCTTT GAATGACCCTAACCAGCCTGTACCAACCGCTCAAGGCAACTTTTTGACCTTGGCCATGATGGTTGGTATGACTTTGCTGC CCTTCCCAGCCTATGGCACGGTGATGGCGCGGCGTGGCCAAGAACGTACCCAAGCCATGCGCGATGAAATGAGTGCTCGC GGTGGTCAACTCGAACGCCCAGGCCGCGTTGTTAGTATCGAAGACCTTGAATCGTTGCCATTGCCAAAATTTGGCTCATG GGTCGCCCAATTGTTTCGCAACAATAACTTCAAACTCAAAAACTATAAATTCAATAAAGATGTGATTGATCTCTATCTTG AACGCAACGAAACCGCTGAGCTTTGGTTGGTGCGCTGTACCATCAGCGAATCGCTTAAACCTGGCCAAGTTCAAGAGTTG TATCAAGATTTGCGTGATAACCCAGAGTGGCACAAAGGCGTAATCGTTACCTCGTTGAAGGTGCAAGATGGCGCTCGCAA ATCGGCTAAATCGCGACCAAACGTCGAGGTGCTCGATGGCGAAACCCTGCTGGAGATCAACGGCTAA
Upstream 100 bases:
>100_bases AGCCTACATCCGCTTTGCCTCGGTTTATCGTTCATTTAGCGATCTTGGCAAGCTGCGTGAAGCTGTCGAAGAACTTATGG AAAAGGAATAAGTAGCTGCA
Downstream 100 bases:
>100_bases TTTGGTTTTGAGGAATGGGCATGAATGTGATTGAAGGAAATTTGATCGGCACAGGCCTACGAGTGGCAATTGTGATTGCC CGCTGGAATGATTTTATCGG
Product: restriction endonuclease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MATPVSQETKTDLKDVKPQAPAVPLLWRQLWIAGLLTGLVWCLVIFAPFSYMIYLAGVIPIGGGIYLGRKIQGRALVHGV IFSLIASATALLIGSILVFTLSAKPALNDPNQPVPTAQGNFLTLAMMVGMTLLPFPAYGTVMARRGQERTQAMRDEMSAR GGQLERPGRVVSIEDLESLPLPKFGSWVAQLFRNNNFKLKNYKFNKDVIDLYLERNETAELWLVRCTISESLKPGQVQEL YQDLRDNPEWHKGVIVTSLKVQDGARKSAKSRPNVEVLDGETLLEING
Sequences:
>Translated_288_residues MATPVSQETKTDLKDVKPQAPAVPLLWRQLWIAGLLTGLVWCLVIFAPFSYMIYLAGVIPIGGGIYLGRKIQGRALVHGV IFSLIASATALLIGSILVFTLSAKPALNDPNQPVPTAQGNFLTLAMMVGMTLLPFPAYGTVMARRGQERTQAMRDEMSAR GGQLERPGRVVSIEDLESLPLPKFGSWVAQLFRNNNFKLKNYKFNKDVIDLYLERNETAELWLVRCTISESLKPGQVQEL YQDLRDNPEWHKGVIVTSLKVQDGARKSAKSRPNVEVLDGETLLEING >Mature_287_residues ATPVSQETKTDLKDVKPQAPAVPLLWRQLWIAGLLTGLVWCLVIFAPFSYMIYLAGVIPIGGGIYLGRKIQGRALVHGVI FSLIASATALLIGSILVFTLSAKPALNDPNQPVPTAQGNFLTLAMMVGMTLLPFPAYGTVMARRGQERTQAMRDEMSARG GQLERPGRVVSIEDLESLPLPKFGSWVAQLFRNNNFKLKNYKFNKDVIDLYLERNETAELWLVRCTISESLKPGQVQELY QDLRDNPEWHKGVIVTSLKVQDGARKSAKSRPNVEVLDGETLLEING
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31905; Mature: 31773
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPVSQETKTDLKDVKPQAPAVPLLWRQLWIAGLLTGLVWCLVIFAPFSYMIYLAGVIP CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGGIYLGRKIQGRALVHGVIFSLIASATALLIGSILVFTLSAKPALNDPNQPVPTAQGN CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC FLTLAMMVGMTLLPFPAYGTVMARRGQERTQAMRDEMSARGGQLERPGRVVSIEDLESLP HHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHCCC LPKFGSWVAQLFRNNNFKLKNYKFNKDVIDLYLERNETAELWLVRCTISESLKPGQVQEL CCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHH YQDLRDNPEWHKGVIVTSLKVQDGARKSAKSRPNVEVLDGETLLEING HHHHHCCCCHHCCEEEEEEEECCCHHHHHCCCCCEEEECCCEEEEECC >Mature Secondary Structure ATPVSQETKTDLKDVKPQAPAVPLLWRQLWIAGLLTGLVWCLVIFAPFSYMIYLAGVIP CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGGGIYLGRKIQGRALVHGVIFSLIASATALLIGSILVFTLSAKPALNDPNQPVPTAQGN CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC FLTLAMMVGMTLLPFPAYGTVMARRGQERTQAMRDEMSARGGQLERPGRVVSIEDLESLP HHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHCCC LPKFGSWVAQLFRNNNFKLKNYKFNKDVIDLYLERNETAELWLVRCTISESLKPGQVQEL CCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHH YQDLRDNPEWHKGVIVTSLKVQDGARKSAKSRPNVEVLDGETLLEING HHHHHCCCCHHCCEEEEEEEECCCHHHHHCCCCCEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA