| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897889
Identifier: 159897889
GI number: 159897889
Start: 1575613
End: 1576218
Strand: Direct
Name: 159897889
Synonym: Haur_1363
Alternate gene names: NA
Gene position: 1575613-1576218 (Clockwise)
Preceding gene: 159897886
Following gene: 159897890
Centisome position: 24.83
GC content: 39.27
Gene sequence:
>606_bases ATGGAAGCTTTTTTACTATCGTTTGGCAAAGAAATTATAGCCCTCGTCTCGATAGCCCTTGGAATGTCAGCATCATTCTA TGGGCAAAGTATCGTAAAAAAAGAGATTGAAATCAAAAAAAATCAAATTCAAGAGGCTGATAAAAAAGCTGAAAAAGATC CAGAAAAAATAAAACCTTCGTGGGATGCTGCACGCACCCGACTAGAATTATATTTTGATATGAATATTCGACAAGTTAAT TTTATTTTCTGGTTGAGTGTTACAGTCATGATCCTTGGATTTGGTATTGTCATTTTTGGAATAACCCAAGCTATGACTTC AGAGGCAACTTTACCCGCCATTATTGCCAGCTCCGCTGGAATTATTATGGAGATTATTGGCGCTACCTTTATGGTGATGT ATAAATCAACGATGGAGCATGCTGGAAGTTATACAAAAACCCTAGAGCGGATGAACTCTGTAGGGATGGCAATGCAGATC TTGGATACGATGCCCGATGATCCCGATCAGGGAGCACTCAAAAACACGACTAAAACAGAGGTAATTAAAATATTAATGCA ACAGGCACATACGCCAGAGGAGCAAGCAACGTCGAAACAGCCATAA
Upstream 100 bases:
>100_bases AGCCAACGATCAACGCATCAGAGATCGCCCGGCGGCTGGGCGCGAATAAGAAAAATAGATTGCGCTGGGTTCGGGAGATT AATGTACAGGAAGAAAAATA
Downstream 100 bases:
>100_bases ACCGATGATATAAGCAAGGAGACCTTTATGAGTGACGATAATCAATATAGCGATATTCCACATGCGGCCTTACGTTCCTA TATTGAACAAAAGGGTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MEAFLLSFGKEIIALVSIALGMSASFYGQSIVKKEIEIKKNQIQEADKKAEKDPEKIKPSWDAARTRLELYFDMNIRQVN FIFWLSVTVMILGFGIVIFGITQAMTSEATLPAIIASSAGIIMEIIGATFMVMYKSTMEHAGSYTKTLERMNSVGMAMQI LDTMPDDPDQGALKNTTKTEVIKILMQQAHTPEEQATSKQP
Sequences:
>Translated_201_residues MEAFLLSFGKEIIALVSIALGMSASFYGQSIVKKEIEIKKNQIQEADKKAEKDPEKIKPSWDAARTRLELYFDMNIRQVN FIFWLSVTVMILGFGIVIFGITQAMTSEATLPAIIASSAGIIMEIIGATFMVMYKSTMEHAGSYTKTLERMNSVGMAMQI LDTMPDDPDQGALKNTTKTEVIKILMQQAHTPEEQATSKQP >Mature_201_residues MEAFLLSFGKEIIALVSIALGMSASFYGQSIVKKEIEIKKNQIQEADKKAEKDPEKIKPSWDAARTRLELYFDMNIRQVN FIFWLSVTVMILGFGIVIFGITQAMTSEATLPAIIASSAGIIMEIIGATFMVMYKSTMEHAGSYTKTLERMNSVGMAMQI LDTMPDDPDQGALKNTTKTEVIKILMQQAHTPEEQATSKQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22351; Mature: 22351
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAFLLSFGKEIIALVSIALGMSASFYGQSIVKKEIEIKKNQIQEADKKAEKDPEKIKPS CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC WDAARTRLELYFDMNIRQVNFIFWLSVTVMILGFGIVIFGITQAMTSEATLPAIIASSAG HHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCH IIMEIIGATFMVMYKSTMEHAGSYTKTLERMNSVGMAMQILDTMPDDPDQGALKNTTKTE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH VIKILMQQAHTPEEQATSKQP HHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure MEAFLLSFGKEIIALVSIALGMSASFYGQSIVKKEIEIKKNQIQEADKKAEKDPEKIKPS CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC WDAARTRLELYFDMNIRQVNFIFWLSVTVMILGFGIVIFGITQAMTSEATLPAIIASSAG HHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCH IIMEIIGATFMVMYKSTMEHAGSYTKTLERMNSVGMAMQILDTMPDDPDQGALKNTTKTE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH VIKILMQQAHTPEEQATSKQP HHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA