| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897890
Identifier: 159897890
GI number: 159897890
Start: 1576246
End: 1576764
Strand: Direct
Name: 159897890
Synonym: Haur_1364
Alternate gene names: NA
Gene position: 1576246-1576764 (Clockwise)
Preceding gene: 159897889
Following gene: 159897891
Centisome position: 24.84
GC content: 37.38
Gene sequence:
>519_bases ATGAGTGACGATAATCAATATAGCGATATTCCACATGCGGCCTTACGTTCCTATATTGAACAAAAGGGTTGGGTTCGCAG GTATCCAAATCTAACAGGTGGCAAACCGATAGGGTATGTTTACTTTGACGATCGATATATCGATGCAAATATCTTGAAAT TTGTCGAGCCTCTTAATCTAGCAAATGCTATCCATTTTGCTCCAAAAGTACCAAAACAAGTTGAACAATTCATACCCAAT AATCCAATGGGTTCTCTGCGTTTAAATATTCAAAATACCATCTTTTATTTTGTAATACCGAAGCAAGAACTTGAAGATTT ATTCAACAAATCGGGCATGTCTGTGGCAGAGGTTATTAAATCGCACAATGAAGAAAAAATTAGAGAGATGGGAATTATAT ATAGTGACCATCAAGGAGTGCTTGATAGTGCTATTGGTAAGCATGTTGTTATTCCTAAGGGTGGAGGGTTTGTTGATCTA GATGGCTCCGAAATACATCTGCCTACAGTTATTCGCTAA
Upstream 100 bases:
>100_bases AACAGAGGTAATTAAAATATTAATGCAACAGGCACATACGCCAGAGGAGCAAGCAACGTCGAAACAGCCATAAACCGATG ATATAAGCAAGGAGACCTTT
Downstream 100 bases:
>100_bases AACTAAAATCCCAGTCAATAAATATTGGCTGGGATTTTCTTTCACTGAAACTACTTCAAATTTTCGCGCCGTGCCTCATA GCACGCTAACCGTGGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSDDNQYSDIPHAALRSYIEQKGWVRRYPNLTGGKPIGYVYFDDRYIDANILKFVEPLNLANAIHFAPKVPKQVEQFIPN NPMGSLRLNIQNTIFYFVIPKQELEDLFNKSGMSVAEVIKSHNEEKIREMGIIYSDHQGVLDSAIGKHVVIPKGGGFVDL DGSEIHLPTVIR
Sequences:
>Translated_172_residues MSDDNQYSDIPHAALRSYIEQKGWVRRYPNLTGGKPIGYVYFDDRYIDANILKFVEPLNLANAIHFAPKVPKQVEQFIPN NPMGSLRLNIQNTIFYFVIPKQELEDLFNKSGMSVAEVIKSHNEEKIREMGIIYSDHQGVLDSAIGKHVVIPKGGGFVDL DGSEIHLPTVIR >Mature_171_residues SDDNQYSDIPHAALRSYIEQKGWVRRYPNLTGGKPIGYVYFDDRYIDANILKFVEPLNLANAIHFAPKVPKQVEQFIPNN PMGSLRLNIQNTIFYFVIPKQELEDLFNKSGMSVAEVIKSHNEEKIREMGIIYSDHQGVLDSAIGKHVVIPKGGGFVDLD GSEIHLPTVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19484; Mature: 19352
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDNQYSDIPHAALRSYIEQKGWVRRYPNLTGGKPIGYVYFDDRYIDANILKFVEPLNL CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEECHHHHHHHHHHHH ANAIHFAPKVPKQVEQFIPNNPMGSLRLNIQNTIFYFVIPKQELEDLFNKSGMSVAEVIK HHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECEEEEEEECHHHHHHHHCCCCCHHHHHHH SHNEEKIREMGIIYSDHQGVLDSAIGKHVVIPKGGGFVDLDGSEIHLPTVIR CCCHHHHHHHCCEECCCCCHHHHHCCCEEEEECCCCEEEECCCEEECCCCCC >Mature Secondary Structure SDDNQYSDIPHAALRSYIEQKGWVRRYPNLTGGKPIGYVYFDDRYIDANILKFVEPLNL CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEECHHHHHHHHHHHH ANAIHFAPKVPKQVEQFIPNNPMGSLRLNIQNTIFYFVIPKQELEDLFNKSGMSVAEVIK HHHHHCCCCCHHHHHHHCCCCCCCEEEEEEECEEEEEEECHHHHHHHHCCCCCHHHHHHH SHNEEKIREMGIIYSDHQGVLDSAIGKHVVIPKGGGFVDLDGSEIHLPTVIR CCCHHHHHHHCCEECCCCCHHHHHCCCEEEEECCCCEEEECCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA