| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897886
Identifier: 159897886
GI number: 159897886
Start: 1573507
End: 1573743
Strand: Direct
Name: 159897886
Synonym: Haur_1360
Alternate gene names: NA
Gene position: 1573507-1573743 (Clockwise)
Preceding gene: 159897885
Following gene: 159897889
Centisome position: 24.79
GC content: 50.21
Gene sequence:
>237_bases ATGAGCGATATGACCGTTACCGATTTGTTTTGTAGTGCTGGTGGTAGTTCAACGGGCGTAGTCAATGCTGGGGCTACCGT GCGCATGGCACTCAACCACTGGAAACTGGTAATCGAAACCAATAATATGAACCACCCTGATACCGACCACGACTGCACCG ACATTCAGGCTTGTGATCCGCGTCGCTATCCGCGCACGACAATCTTAATTGCATCTCCGGAATGCGTTAATGAGTAG
Upstream 100 bases:
>100_bases TATCCTTCGCGATGCCTCTGGTTATAAAGTTTATCTCAATAACTACTGCAAACCGCGCTTCACTCCGAGGCGCGGTTTTG TTTTTAGGAGCAATCAGCCA
Downstream 100 bases:
>100_bases GCCTACTATTGCAATATTACAGAAGCTACGACCAATGGCTGAAAATTTTGGTATTGAGTGGTCAGACCAGTTATAGACAA TTAATTAGGATAATACTTTA
Product: type II restriction-modification system DNA cytosine-specific methylase
Products: NA
Alternate protein names: Type II Restriction- System DNA Cytosine-Specific Methylase; DNA Cytosine-Specific Methylase; DNA Methylase; Methylase
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSDMTVTDLFCSAGGSSTGVVNAGATVRMALNHWKLVIETNNMNHPDTDHDCTDIQACDPRRYPRTTILIASPECVNE
Sequences:
>Translated_78_residues MSDMTVTDLFCSAGGSSTGVVNAGATVRMALNHWKLVIETNNMNHPDTDHDCTDIQACDPRRYPRTTILIASPECVNE >Mature_77_residues SDMTVTDLFCSAGGSSTGVVNAGATVRMALNHWKLVIETNNMNHPDTDHDCTDIQACDPRRYPRTTILIASPECVNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8511; Mature: 8379
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMTVTDLFCSAGGSSTGVVNAGATVRMALNHWKLVIETNNMNHPDTDHDCTDIQACDP CCCCEEEEEEECCCCCCCEEEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCC RRYPRTTILIASPECVNE CCCCCEEEEEECCHHCCC >Mature Secondary Structure SDMTVTDLFCSAGGSSTGVVNAGATVRMALNHWKLVIETNNMNHPDTDHDCTDIQACDP CCCEEEEEEECCCCCCCEEEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCC RRYPRTTILIASPECVNE CCCCCEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA