Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897861

Identifier: 159897861

GI number: 159897861

Start: 1546936

End: 1547901

Strand: Reverse

Name: 159897861

Synonym: Haur_1335

Alternate gene names: NA

Gene position: 1547901-1546936 (Counterclockwise)

Preceding gene: 159897870

Following gene: 159897860

Centisome position: 24.39

GC content: 50.52

Gene sequence:

>966_bases
ATGCCAGTTTGCACGCGCTGCCACCAAGATACTGGTCTTATGGGTGCTTTACGCTTCAATCGTCAAACCAATCGCTGCGG
CCCCTGCGACGGCGTTGTCCAACAACAACTCCAGCGCTTTCGCCAGGCGTTTCTGCAATTTTGTAATGATGGGCTTTTAT
CGCCACAAGAATGGACGATCCTTATTCAAGGCTCGCAGCAAGAAGGCTTGAGCTGGGATGAGGCGCTGAACTATATTCGT
GGTGATGCACTGAACTTCCTTGAACGCACACTGGCTTTTGCATCGACCGATGGCGTAATTACGAATGAAGAAGCCGCCCA
TATTCAGCAACTCCAACAGGCCTTTCGCATCCCCGATCATCAAGCCCAACCGCTGCTCCAGCGCCTCAAATACTTGCAAA
CCATTAGTAATGTGCGCCAAGGTCATCTGCCAACGATTCAACCAACCGTTCGGCTCGATGCTGGCGAAATCTGCCATCTC
GAAACTGATGCCCGCTATCATAAAGTCACCGCCAAAGGCACTACCTTGCAACCTGGGCGTTTTGTGGCTACCAATAAGAA
ACTGCATTTTCTTTCCCAAGCGGGTGGAAGCAGCATCGACTGGAAGAAGGTCATGCGGATTAACGCTGAGGCAGGCAGCA
TCTACTTAGAACTATCGGTTAAAAGTGGGAATGGTCGCTATAGCGTGGCAGATCCAACCATGGCTGAAGCAGTATTTGAT
GTGTTAGTGCGTATGGCCAAACGAGAGTTTATTGCACCCCAAACTGGACAAGAAAGCCGCTATATTCCCCAAGATGTAAA
ACTGGCAGTGTGGCAACGTGATCAGGGCAAGTGTACCCAGTGTGGCGATGCCTCTTATCTTGAGTTTGATCATATCATTC
CGCACAGCAAGGGCGGAGCAAACACCGTCGGCAATGTGCAGCTGCTTTGTCGGAAATGTAATCTGGCGAAGGGTGATCGG
ATTTAG

Upstream 100 bases:

>100_bases
TTGACAGCGGCGAGCATGATCGCTAGAGTAGCTGTAGCCTCATGTGGATATAGCTATACCTAACCTCAGAGTATTTTGGA
TTTCTAGGAGTGAGACGATC

Downstream 100 bases:

>100_bases
TTAATTATTCTTGGACTGTTGACCGACAACATATAACCCAAGTGTGCTTAAAATATGAGAGGAAGGGTTATTTCAGATTT
TTTCTAGCAGATTAATATTT

Product: HNH endonuclease

Products: NA

Alternate protein names: Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; TerF-Related Protein; Tellurium Resistance Protein TerE; HNH Nuclease; Stress Protein

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MPVCTRCHQDTGLMGALRFNRQTNRCGPCDGVVQQQLQRFRQAFLQFCNDGLLSPQEWTILIQGSQQEGLSWDEALNYIR
GDALNFLERTLAFASTDGVITNEEAAHIQQLQQAFRIPDHQAQPLLQRLKYLQTISNVRQGHLPTIQPTVRLDAGEICHL
ETDARYHKVTAKGTTLQPGRFVATNKKLHFLSQAGGSSIDWKKVMRINAEAGSIYLELSVKSGNGRYSVADPTMAEAVFD
VLVRMAKREFIAPQTGQESRYIPQDVKLAVWQRDQGKCTQCGDASYLEFDHIIPHSKGGANTVGNVQLLCRKCNLAKGDR
I

Sequences:

>Translated_321_residues
MPVCTRCHQDTGLMGALRFNRQTNRCGPCDGVVQQQLQRFRQAFLQFCNDGLLSPQEWTILIQGSQQEGLSWDEALNYIR
GDALNFLERTLAFASTDGVITNEEAAHIQQLQQAFRIPDHQAQPLLQRLKYLQTISNVRQGHLPTIQPTVRLDAGEICHL
ETDARYHKVTAKGTTLQPGRFVATNKKLHFLSQAGGSSIDWKKVMRINAEAGSIYLELSVKSGNGRYSVADPTMAEAVFD
VLVRMAKREFIAPQTGQESRYIPQDVKLAVWQRDQGKCTQCGDASYLEFDHIIPHSKGGANTVGNVQLLCRKCNLAKGDR
I
>Mature_320_residues
PVCTRCHQDTGLMGALRFNRQTNRCGPCDGVVQQQLQRFRQAFLQFCNDGLLSPQEWTILIQGSQQEGLSWDEALNYIRG
DALNFLERTLAFASTDGVITNEEAAHIQQLQQAFRIPDHQAQPLLQRLKYLQTISNVRQGHLPTIQPTVRLDAGEICHLE
TDARYHKVTAKGTTLQPGRFVATNKKLHFLSQAGGSSIDWKKVMRINAEAGSIYLELSVKSGNGRYSVADPTMAEAVFDV
LVRMAKREFIAPQTGQESRYIPQDVKLAVWQRDQGKCTQCGDASYLEFDHIIPHSKGGANTVGNVQLLCRKCNLAKGDRI

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35926; Mature: 35795

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVCTRCHQDTGLMGALRFNRQTNRCGPCDGVVQQQLQRFRQAFLQFCNDGLLSPQEWTI
CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
LIQGSQQEGLSWDEALNYIRGDALNFLERTLAFASTDGVITNEEAAHIQQLQQAFRIPDH
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCC
QAQPLLQRLKYLQTISNVRQGHLPTIQPTVRLDAGEICHLETDARYHKVTAKGTTLQPGR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCEECCCE
FVATNKKLHFLSQAGGSSIDWKKVMRINAEAGSIYLELSVKSGNGRYSVADPTMAEAVFD
EEECCCCEEEHHHCCCCCCCHHHHEEEECCCCEEEEEEEEECCCCEEEECCCHHHHHHHH
VLVRMAKREFIAPQTGQESRYIPQDVKLAVWQRDQGKCTQCGDASYLEFDHIIPHSKGGA
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHHCCCCCCCCC
NTVGNVQLLCRKCNLAKGDRI
CCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PVCTRCHQDTGLMGALRFNRQTNRCGPCDGVVQQQLQRFRQAFLQFCNDGLLSPQEWTI
CCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
LIQGSQQEGLSWDEALNYIRGDALNFLERTLAFASTDGVITNEEAAHIQQLQQAFRIPDH
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCC
QAQPLLQRLKYLQTISNVRQGHLPTIQPTVRLDAGEICHLETDARYHKVTAKGTTLQPGR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCEECCCE
FVATNKKLHFLSQAGGSSIDWKKVMRINAEAGSIYLELSVKSGNGRYSVADPTMAEAVFD
EEECCCCEEEHHHCCCCCCCHHHHEEEECCCCEEEEEEEEECCCCEEEECCCHHHHHHHH
VLVRMAKREFIAPQTGQESRYIPQDVKLAVWQRDQGKCTQCGDASYLEFDHIIPHSKGGA
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHHCCCCCCCCC
NTVGNVQLLCRKCNLAKGDRI
CCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA