Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897860

Identifier: 159897860

GI number: 159897860

Start: 1544738

End: 1546813

Strand: Reverse

Name: 159897860

Synonym: Haur_1334

Alternate gene names: NA

Gene position: 1546813-1544738 (Counterclockwise)

Preceding gene: 159897861

Following gene: 159897857

Centisome position: 24.37

GC content: 31.89

Gene sequence:

>2076_bases
ATGGAACTTGACGATATTATCACCGATGGCAAACATATTACGCAACTACGCACAGTTTTAGTAAAATCAATGGGTGAGAA
TGGTGCAGATAAGCTTATTAATAATATTCTAGAATTAATTCAAGAATTACCTTCTGCCGAAGAAGGAAGTCAAAACCGAC
ATGGATTGCTTCTAGGCTATATTCAAAGTGGTAAAACATTTGCTTTCACTACAGCTATAGCATTAGCGGCAGATAATGGA
TATCGACTCTTTATTATTCTTACTTCTAATAACCTTATACTCTATAATCAGACAATTGATGAGCGGTTGAAACAAGATTT
ACAAAGTATAGAAGTGGAAGGGAAGGATAGTTGGGAACAAAAGATACTAATGATGACCCAAACCCTTAAAGATCCTAAGG
GTGTTTTAGTATTAGTTACAACAAAAAATACTGCTATTCTTTACAAGTTAGAACAAACCCTTAGAACAATTCAAGAAGAG
CTCAAGATGGGCCTTCCTATAGCATTAATTATTGATGATGAAGCTGATGAGGGTGGATTAGATACTAATACTCGAAGAAG
AAGCGTTAATCCTCTTATAGAGGCTGGGCCTACGTTCAGTGCTATTGAAGAGATACGTCGTTTAGTTCCTAATCATGTCA
GATTACAGGTTACAGCTACTCCTCAAGCACTCTTTCTTCAAGATTCTGGACATGAATCAAGACCTGGTTTTACTGTTTTA
TTGGAACCAGGGGCTGATTATGTTGGAAGCGAACAGTTTTTTGCGCTGAAACAAGAAATTGACATGATTTATGAAAATGA
TGATGAAAATGAATTAGAGGAACGTAAATCAAAAATTATACGAAGAATCGATCAGCATGATATCCATATGATGATTGAAC
AAGAAGGTGATAGTATTCCAGATAGTCTGCGAGATGCATTACTAACATTTTATATTGGAGCAACTATCAAGATAGTTGAT
GAACCTAGTACTAGATTTTCTTTTCTTTGTCATATTAGTGCGAGAAAAGCAGATCATGATAAAATTAGTCAAATAATAAA
TAAATATATAGGAGTACTTAGAAAATCATTAATAGATTATGTTGATAATAATATCACAAGTGAAGATATATATTATCTAG
AAAAAATATATACTGACATAATAAGTACATATGAGGATGGTATTTCATTAGGAACGATAATTAATGAATTAAGAGAGTCT
ATTATAAAAACAGATATAAGTGTAATTAACAGTAGTACGACCTATCAACCAACATATTCAGGAAAATATAATATTTTCAT
TGGAGGAACTAAAATAGCGCGTGGGGTCACCATAAAAAATTTAATTGTCACATATTATGGGAGACAACCAAAAGTAACAA
ACATGGATACCATGCTTCAGCATGCAAGAATGTATGGGTACAGAAAAAATCATATGGATGTTACAAGACTATTTATAACT
GAAGAAATTGAAAAAAGATTTACTGTTATTTATGAATCAGAAAAAGCATTACGTGATTTAATAAAAAGATATCCTAATGA
AAATTATCGCAGTATTATTATAAATAACACGGTAAGAGCAACAAGAAACAATGTTCTAAATAAGTTTAGTATAGGATATT
ACGTTTCTGGAAAGAATTACTTACAAAGATATCCATATTACAATAAGTCAGATATAGATAAAACTACTAAAAATATTGAT
GCCATATTGGAAGACTATCCAACTACCGGTATCAAGACCGAGGAAAAAGAGGTTGATATAGAAATTCTGATAGATATATT
AAATAATATCCATTCGGTACCTAGAACTTTTAGTCTTTGGAATGACAAAAAAATTATATCTGCACTGGAATTAATGAAGA
CAGGAAACATTACGAGAGGTCTTTTAATTGTTAGCCGTAATCGAAATATTGGTAGTAAAGACAAATTTGGTGCTTTATTA
CCACCCGGCTATAAAGCCAAAGCAAGCCGAGAATATCCAACTTTATTTATATTCAAAGTTACTGGCGAAAACTGGAATGG
AAAACCTTTTTGGATACCTGCAATAACATTTCCAGATACAAAAGACAAATATACTTTTGTCTTTAATCTTTCATAA

Upstream 100 bases:

>100_bases
CCGACAACATATAACCCAAGTGTGCTTAAAATATGAGAGGAAGGGTTATTTCAGATTTTTTCTAGCAGATTAATATTTTT
CTATATAGGAGTCTAGAATA

Downstream 100 bases:

>100_bases
GAGCATTATGTGGCAGAGATAACCAATAATCTGCGATAGCCAGTGCCACCTTTGACGAAAGCAAAGGTGGCACTGCATTC
GCTAGTTGCTGTTGGGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: Endonuclease Z1 Domain; Endonuclease Z1 Domain-Containing Protein; Helicase; Endonuclease Z1 Domain Protein; Conserved Hypothethical Protein; Stress-Sensitive Restriction System Protein; Stress-Sensitive Restriction System

Number of amino acids: Translated: 691; Mature: 691

Protein sequence:

>691_residues
MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGYIQSGKTFAFTTAIALAADNG
YRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQKILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEE
LKMGLPIALIIDDEADEGGLDTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL
LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIPDSLRDALLTFYIGATIKIVD
EPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDYVDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRES
IIKTDISVINSSTTYQPTYSGKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT
EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNYLQRYPYYNKSDIDKTTKNID
AILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLWNDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALL
PPGYKAKASREYPTLFIFKVTGENWNGKPFWIPAITFPDTKDKYTFVFNLS

Sequences:

>Translated_691_residues
MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGYIQSGKTFAFTTAIALAADNG
YRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQKILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEE
LKMGLPIALIIDDEADEGGLDTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL
LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIPDSLRDALLTFYIGATIKIVD
EPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDYVDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRES
IIKTDISVINSSTTYQPTYSGKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT
EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNYLQRYPYYNKSDIDKTTKNID
AILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLWNDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALL
PPGYKAKASREYPTLFIFKVTGENWNGKPFWIPAITFPDTKDKYTFVFNLS
>Mature_691_residues
MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGYIQSGKTFAFTTAIALAADNG
YRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQKILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEE
LKMGLPIALIIDDEADEGGLDTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL
LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIPDSLRDALLTFYIGATIKIVD
EPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDYVDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRES
IIKTDISVINSSTTYQPTYSGKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT
EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNYLQRYPYYNKSDIDKTTKNID
AILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLWNDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALL
PPGYKAKASREYPTLFIFKVTGENWNGKPFWIPAITFPDTKDKYTFVFNLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79058; Mature: 79058

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGY
CCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
IQSGKTFAFTTAIALAADNGYRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQ
ECCCCEEEEEEEEEEEECCCEEEEEEEECCCEEEEECCHHHHHHHHHHHEECCCCCCHHH
KILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEELKMGLPIALIIDDEADEGGL
HHHHHHHHCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
DTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL
CCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCEEEE
LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIP
ECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
DSLRDALLTFYIGATIKIVDEPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDY
HHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRESIIKTDISVINSSTTYQPTYS
HCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT
CEEEEEECCCHHCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNY
HHHHHHEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHEEEEEEEECCCHH
LQRYPYYNKSDIDKTTKNIDAILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLW
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHCCCEEECC
NDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALLPPGYKAKASREYPTLFIFKV
CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
TGENWNGKPFWIPAITFPDTKDKYTFVFNLS
ECCCCCCCEEEEEEEECCCCCCCEEEEEECC
>Mature Secondary Structure
MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGY
CCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
IQSGKTFAFTTAIALAADNGYRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQ
ECCCCEEEEEEEEEEEECCCEEEEEEEECCCEEEEECCHHHHHHHHHHHEECCCCCCHHH
KILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEELKMGLPIALIIDDEADEGGL
HHHHHHHHCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
DTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL
CCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCEEEE
LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIP
ECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
DSLRDALLTFYIGATIKIVDEPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDY
HHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
VDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRESIIKTDISVINSSTTYQPTYS
HCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT
CEEEEEECCCHHCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNY
HHHHHHEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHEEEEEEEECCCHH
LQRYPYYNKSDIDKTTKNIDAILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLW
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHCCCEEECC
NDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALLPPGYKAKASREYPTLFIFKV
CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
TGENWNGKPFWIPAITFPDTKDKYTFVFNLS
ECCCCCCCEEEEEEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA