| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897860
Identifier: 159897860
GI number: 159897860
Start: 1544738
End: 1546813
Strand: Reverse
Name: 159897860
Synonym: Haur_1334
Alternate gene names: NA
Gene position: 1546813-1544738 (Counterclockwise)
Preceding gene: 159897861
Following gene: 159897857
Centisome position: 24.37
GC content: 31.89
Gene sequence:
>2076_bases ATGGAACTTGACGATATTATCACCGATGGCAAACATATTACGCAACTACGCACAGTTTTAGTAAAATCAATGGGTGAGAA TGGTGCAGATAAGCTTATTAATAATATTCTAGAATTAATTCAAGAATTACCTTCTGCCGAAGAAGGAAGTCAAAACCGAC ATGGATTGCTTCTAGGCTATATTCAAAGTGGTAAAACATTTGCTTTCACTACAGCTATAGCATTAGCGGCAGATAATGGA TATCGACTCTTTATTATTCTTACTTCTAATAACCTTATACTCTATAATCAGACAATTGATGAGCGGTTGAAACAAGATTT ACAAAGTATAGAAGTGGAAGGGAAGGATAGTTGGGAACAAAAGATACTAATGATGACCCAAACCCTTAAAGATCCTAAGG GTGTTTTAGTATTAGTTACAACAAAAAATACTGCTATTCTTTACAAGTTAGAACAAACCCTTAGAACAATTCAAGAAGAG CTCAAGATGGGCCTTCCTATAGCATTAATTATTGATGATGAAGCTGATGAGGGTGGATTAGATACTAATACTCGAAGAAG AAGCGTTAATCCTCTTATAGAGGCTGGGCCTACGTTCAGTGCTATTGAAGAGATACGTCGTTTAGTTCCTAATCATGTCA GATTACAGGTTACAGCTACTCCTCAAGCACTCTTTCTTCAAGATTCTGGACATGAATCAAGACCTGGTTTTACTGTTTTA TTGGAACCAGGGGCTGATTATGTTGGAAGCGAACAGTTTTTTGCGCTGAAACAAGAAATTGACATGATTTATGAAAATGA TGATGAAAATGAATTAGAGGAACGTAAATCAAAAATTATACGAAGAATCGATCAGCATGATATCCATATGATGATTGAAC AAGAAGGTGATAGTATTCCAGATAGTCTGCGAGATGCATTACTAACATTTTATATTGGAGCAACTATCAAGATAGTTGAT GAACCTAGTACTAGATTTTCTTTTCTTTGTCATATTAGTGCGAGAAAAGCAGATCATGATAAAATTAGTCAAATAATAAA TAAATATATAGGAGTACTTAGAAAATCATTAATAGATTATGTTGATAATAATATCACAAGTGAAGATATATATTATCTAG AAAAAATATATACTGACATAATAAGTACATATGAGGATGGTATTTCATTAGGAACGATAATTAATGAATTAAGAGAGTCT ATTATAAAAACAGATATAAGTGTAATTAACAGTAGTACGACCTATCAACCAACATATTCAGGAAAATATAATATTTTCAT TGGAGGAACTAAAATAGCGCGTGGGGTCACCATAAAAAATTTAATTGTCACATATTATGGGAGACAACCAAAAGTAACAA ACATGGATACCATGCTTCAGCATGCAAGAATGTATGGGTACAGAAAAAATCATATGGATGTTACAAGACTATTTATAACT GAAGAAATTGAAAAAAGATTTACTGTTATTTATGAATCAGAAAAAGCATTACGTGATTTAATAAAAAGATATCCTAATGA AAATTATCGCAGTATTATTATAAATAACACGGTAAGAGCAACAAGAAACAATGTTCTAAATAAGTTTAGTATAGGATATT ACGTTTCTGGAAAGAATTACTTACAAAGATATCCATATTACAATAAGTCAGATATAGATAAAACTACTAAAAATATTGAT GCCATATTGGAAGACTATCCAACTACCGGTATCAAGACCGAGGAAAAAGAGGTTGATATAGAAATTCTGATAGATATATT AAATAATATCCATTCGGTACCTAGAACTTTTAGTCTTTGGAATGACAAAAAAATTATATCTGCACTGGAATTAATGAAGA CAGGAAACATTACGAGAGGTCTTTTAATTGTTAGCCGTAATCGAAATATTGGTAGTAAAGACAAATTTGGTGCTTTATTA CCACCCGGCTATAAAGCCAAAGCAAGCCGAGAATATCCAACTTTATTTATATTCAAAGTTACTGGCGAAAACTGGAATGG AAAACCTTTTTGGATACCTGCAATAACATTTCCAGATACAAAAGACAAATATACTTTTGTCTTTAATCTTTCATAA
Upstream 100 bases:
>100_bases CCGACAACATATAACCCAAGTGTGCTTAAAATATGAGAGGAAGGGTTATTTCAGATTTTTTCTAGCAGATTAATATTTTT CTATATAGGAGTCTAGAATA
Downstream 100 bases:
>100_bases GAGCATTATGTGGCAGAGATAACCAATAATCTGCGATAGCCAGTGCCACCTTTGACGAAAGCAAAGGTGGCACTGCATTC GCTAGTTGCTGTTGGGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease Z1 Domain; Endonuclease Z1 Domain-Containing Protein; Helicase; Endonuclease Z1 Domain Protein; Conserved Hypothethical Protein; Stress-Sensitive Restriction System Protein; Stress-Sensitive Restriction System
Number of amino acids: Translated: 691; Mature: 691
Protein sequence:
>691_residues MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGYIQSGKTFAFTTAIALAADNG YRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQKILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEE LKMGLPIALIIDDEADEGGLDTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIPDSLRDALLTFYIGATIKIVD EPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDYVDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRES IIKTDISVINSSTTYQPTYSGKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNYLQRYPYYNKSDIDKTTKNID AILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLWNDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALL PPGYKAKASREYPTLFIFKVTGENWNGKPFWIPAITFPDTKDKYTFVFNLS
Sequences:
>Translated_691_residues MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGYIQSGKTFAFTTAIALAADNG YRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQKILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEE LKMGLPIALIIDDEADEGGLDTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIPDSLRDALLTFYIGATIKIVD EPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDYVDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRES IIKTDISVINSSTTYQPTYSGKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNYLQRYPYYNKSDIDKTTKNID AILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLWNDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALL PPGYKAKASREYPTLFIFKVTGENWNGKPFWIPAITFPDTKDKYTFVFNLS >Mature_691_residues MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGYIQSGKTFAFTTAIALAADNG YRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQKILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEE LKMGLPIALIIDDEADEGGLDTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIPDSLRDALLTFYIGATIKIVD EPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDYVDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRES IIKTDISVINSSTTYQPTYSGKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNYLQRYPYYNKSDIDKTTKNID AILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLWNDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALL PPGYKAKASREYPTLFIFKVTGENWNGKPFWIPAITFPDTKDKYTFVFNLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79058; Mature: 79058
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGY CCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE IQSGKTFAFTTAIALAADNGYRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQ ECCCCEEEEEEEEEEEECCCEEEEEEEECCCEEEEECCHHHHHHHHHHHEECCCCCCHHH KILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEELKMGLPIALIIDDEADEGGL HHHHHHHHCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC DTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL CCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCEEEE LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIP ECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC DSLRDALLTFYIGATIKIVDEPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDY HHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH VDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRESIIKTDISVINSSTTYQPTYS HCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT CEEEEEECCCHHCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNY HHHHHHEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHEEEEEEEECCCHH LQRYPYYNKSDIDKTTKNIDAILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLW HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHCCCEEECC NDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALLPPGYKAKASREYPTLFIFKV CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE TGENWNGKPFWIPAITFPDTKDKYTFVFNLS ECCCCCCCEEEEEEEECCCCCCCEEEEEECC >Mature Secondary Structure MELDDIITDGKHITQLRTVLVKSMGENGADKLINNILELIQELPSAEEGSQNRHGLLLGY CCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE IQSGKTFAFTTAIALAADNGYRLFIILTSNNLILYNQTIDERLKQDLQSIEVEGKDSWEQ ECCCCEEEEEEEEEEEECCCEEEEEEEECCCEEEEECCHHHHHHHHHHHEECCCCCCHHH KILMMTQTLKDPKGVLVLVTTKNTAILYKLEQTLRTIQEELKMGLPIALIIDDEADEGGL HHHHHHHHCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC DTNTRRRSVNPLIEAGPTFSAIEEIRRLVPNHVRLQVTATPQALFLQDSGHESRPGFTVL CCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCCCEEEE LEPGADYVGSEQFFALKQEIDMIYENDDENELEERKSKIIRRIDQHDIHMMIEQEGDSIP ECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC DSLRDALLTFYIGATIKIVDEPSTRFSFLCHISARKADHDKISQIINKYIGVLRKSLIDY HHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH VDNNITSEDIYYLEKIYTDIISTYEDGISLGTIINELRESIIKTDISVINSSTTYQPTYS HCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GKYNIFIGGTKIARGVTIKNLIVTYYGRQPKVTNMDTMLQHARMYGYRKNHMDVTRLFIT CEEEEEECCCHHCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH EEIEKRFTVIYESEKALRDLIKRYPNENYRSIIINNTVRATRNNVLNKFSIGYYVSGKNY HHHHHHEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHEEEEEEEECCCHH LQRYPYYNKSDIDKTTKNIDAILEDYPTTGIKTEEKEVDIEILIDILNNIHSVPRTFSLW HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCHHHHHHHHHHHHHHCCCEEECC NDKKIISALELMKTGNITRGLLIVSRNRNIGSKDKFGALLPPGYKAKASREYPTLFIFKV CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE TGENWNGKPFWIPAITFPDTKDKYTFVFNLS ECCCCCCCEEEEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA