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The map label for this gene is 159897857

Identifier: 159897857

GI number: 159897857

Start: 1541801

End: 1542229

Strand: Reverse

Name: 159897857

Synonym: Haur_1331

Alternate gene names: NA

Gene position: 1542229-1541801 (Counterclockwise)

Preceding gene: 159897860

Following gene: 159897856

Centisome position: 24.3

GC content: 51.98

Gene sequence:

>429_bases
ATGTGGCAGGTGGTTATGCAATGGTTTCAAGACTGGTTTGCGAATAATGCAACGATTGGCACGCTGTTACTCATGATGTT
TTTTGACATCCTGACTGGCCTGCTGTTGGCGGGTCAAAATGCCAAAATCAATAGCAGCATGTCTGGCAAGGGGATGCGTC
GCAAGGCCATGGAACTTATTTTCGTGATGATTGGCGCAGCCCTTGAGCGCTTTATCGGCAACGCGCCAGTCGCTGAAAGC
ATCGCCTTGGGCTTTTGCTTGGCTGAGCTGCTGAGTATTATTGAAAATGCCGCAAAGCTCGGCGTGCCTATCCCCGCTCC
GCTCAAGCGGGTTATGTCGGTCTTGGCTGAGCAAGCGAAGGACAATAGCCAGCGCCCCGATCTCCTCGAACAAGGCCTGG
AGCGAATTGAAAAGGATGGTCATCTATGA

Upstream 100 bases:

>100_bases
ATCGCGCTCGGAGAGCGGGTTGATTTAGTTTCAACCCGCGTTTCGCGTGGTGTTTTTTGTATACTCGCCTGCGAGCTATC
AATTGATTGAAGGATTGATT

Downstream 100 bases:

>100_bases
GCCTTTTCCGATTCGCCCAGTCGCGCATCTTCACCACGCCTGATCTCTCGATCGTGGATTTTCCAGCAGCCCCAACCCAC
TTCACGGTTGGACGAGCTGG

Product: toxin secretion/phage lysis holin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MWQVVMQWFQDWFANNATIGTLLLMMFFDILTGLLLAGQNAKINSSMSGKGMRRKAMELIFVMIGAALERFIGNAPVAES
IALGFCLAELLSIIENAAKLGVPIPAPLKRVMSVLAEQAKDNSQRPDLLEQGLERIEKDGHL

Sequences:

>Translated_142_residues
MWQVVMQWFQDWFANNATIGTLLLMMFFDILTGLLLAGQNAKINSSMSGKGMRRKAMELIFVMIGAALERFIGNAPVAES
IALGFCLAELLSIIENAAKLGVPIPAPLKRVMSVLAEQAKDNSQRPDLLEQGLERIEKDGHL
>Mature_142_residues
MWQVVMQWFQDWFANNATIGTLLLMMFFDILTGLLLAGQNAKINSSMSGKGMRRKAMELIFVMIGAALERFIGNAPVAES
IALGFCLAELLSIIENAAKLGVPIPAPLKRVMSVLAEQAKDNSQRPDLLEQGLERIEKDGHL

Specific function: Unknown

COG id: COG4824

COG function: function code R; Phage-related holin (Lysis protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15661; Mature: 15661

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQVVMQWFQDWFANNATIGTLLLMMFFDILTGLLLAGQNAKINSSMSGKGMRRKAMELI
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
FVMIGAALERFIGNAPVAESIALGFCLAELLSIIENAAKLGVPIPAPLKRVMSVLAEQAK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DNSQRPDLLEQGLERIEKDGHL
CCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWQVVMQWFQDWFANNATIGTLLLMMFFDILTGLLLAGQNAKINSSMSGKGMRRKAMELI
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
FVMIGAALERFIGNAPVAESIALGFCLAELLSIIENAAKLGVPIPAPLKRVMSVLAEQAK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
DNSQRPDLLEQGLERIEKDGHL
CCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA