| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897201
Identifier: 159897201
GI number: 159897201
Start: 770661
End: 771197
Strand: Reverse
Name: 159897201
Synonym: Haur_0672
Alternate gene names: NA
Gene position: 771197-770661 (Counterclockwise)
Preceding gene: 159897202
Following gene: 159897200
Centisome position: 12.15
GC content: 57.17
Gene sequence:
>537_bases ATGACCACGACACCAATAACCATTACCTTGACCGAAACCCTTGATCTGCCCAAGCACGGCCAGCATACTGTGCAAATTAC CGTGACCCCACCCAGCACCGAGCCGCACCATCTCGCCCCCTTGCTGCAACAGGCGACGATGACGCTCTTTCAGCAACTGG ATGCCGCACTAATTCGCGTTCAGCAGCCACCGCGCTATCTGTGTGGCGCACTGTGTAGCGTGTTGGTCTGCCCGTTTCTT GGGTTGTATCTGCGTGTACCTCAAAGCACGCCGCTCGAAACCTTGCTTGCGGAAACGGTCGTCGATGCCAAGGGCGACGC ACACCAGCTCTGGACGGTCGCGCTGATGGCCGTTCCGCCAGCGCTCGTCTTGCCGCATATCCCCGTGCTTATTCATGCCT TTTCGATCCAAGGGGCGAAGTCATGGCGGGAATATCGCGGCGAAGGTGATACCCTGCTTGCAGAACGCTTGCATGAGTGG CAACACGCTATTCCTGAACCAGTACGAACCGATGAACACTGGCTCAGTGGACTTTAA
Upstream 100 bases:
>100_bases TTGACAGCTTGGGTGGCAAACGCACGCGCCGTCTCAGCCAAATTCGCCAGGTCAAGCAGGTGCTTGATCTTGGTGCTTAA TAGCGAAAGGAATCTTTTTT
Downstream 100 bases:
>100_bases TCGAGTATTCGAGGCCGTGGCTGCCACATCAAGCAAGCCACGGCCATTTAGTGATCGGCATGGTTGCGGCATACAAGCCC ATTCATATCGTGTTCAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTTTPITITLTETLDLPKHGQHTVQITVTPPSTEPHHLAPLLQQATMTLFQQLDAALIRVQQPPRYLCGALCSVLVCPFL GLYLRVPQSTPLETLLAETVVDAKGDAHQLWTVALMAVPPALVLPHIPVLIHAFSIQGAKSWREYRGEGDTLLAERLHEW QHAIPEPVRTDEHWLSGL
Sequences:
>Translated_178_residues MTTTPITITLTETLDLPKHGQHTVQITVTPPSTEPHHLAPLLQQATMTLFQQLDAALIRVQQPPRYLCGALCSVLVCPFL GLYLRVPQSTPLETLLAETVVDAKGDAHQLWTVALMAVPPALVLPHIPVLIHAFSIQGAKSWREYRGEGDTLLAERLHEW QHAIPEPVRTDEHWLSGL >Mature_177_residues TTTPITITLTETLDLPKHGQHTVQITVTPPSTEPHHLAPLLQQATMTLFQQLDAALIRVQQPPRYLCGALCSVLVCPFLG LYLRVPQSTPLETLLAETVVDAKGDAHQLWTVALMAVPPALVLPHIPVLIHAFSIQGAKSWREYRGEGDTLLAERLHEWQ HAIPEPVRTDEHWLSGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19745; Mature: 19614
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPITITLTETLDLPKHGQHTVQITVTPPSTEPHHLAPLLQQATMTLFQQLDAALIRV CCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC QQPPRYLCGALCSVLVCPFLGLYLRVPQSTPLETLLAETVVDAKGDAHQLWTVALMAVPP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCH ALVLPHIPVLIHAFSIQGAKSWREYRGEGDTLLAERLHEWQHAIPEPVRTDEHWLSGL HHHHCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCC >Mature Secondary Structure TTTPITITLTETLDLPKHGQHTVQITVTPPSTEPHHLAPLLQQATMTLFQQLDAALIRV CCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC QQPPRYLCGALCSVLVCPFLGLYLRVPQSTPLETLLAETVVDAKGDAHQLWTVALMAVPP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCH ALVLPHIPVLIHAFSIQGAKSWREYRGEGDTLLAERLHEWQHAIPEPVRTDEHWLSGL HHHHCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA