Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897112

Identifier: 159897112

GI number: 159897112

Start: 670915

End: 671508

Strand: Reverse

Name: 159897112

Synonym: Haur_0583

Alternate gene names: NA

Gene position: 671508-670915 (Counterclockwise)

Preceding gene: 159897113

Following gene: 159897110

Centisome position: 10.58

GC content: 32.32

Gene sequence:

>594_bases
ATGAAAGATATTTCAGATAAATACATTCGAAAACGAATCGATGATTATTCGATTAATAATAGCTACTCAATTGTTAGCAG
AATTGTGATGCGTCAGTATTTACAAAAGAATTTCTTGATAGGAATAGTTCTTTTTTTATTTATACTTATAGTTAGTATTT
CAATGAATGGATTGTTCTTGGTTAAAATGATAGCTGCAAGTATCATTTCCATTGGATTATTATCCTTCTTTACGTTCTTT
GAAACCATACTTTATACAGACAAGAAAGCCTACATTCTCTTTTTAATCATCAAGCATTTTCAGCAAACAAACATTCAACC
ATATCAACTGACAACCCTTAAGGATATTACCGCACTGGAAGCTTCAATTGTAGGAACTAAAACTGCCTCAACATTAATTA
TTATTACAATTCTAATCACGCTTGGGCCAGTTATCGTTCAAAAAGTTCATCCACTGGCAACCGCAATCGCAACCATAGTT
TTGCTACTAATTTTATTTACACAGATTTTACAGGGCTATGCTGATGCGTTAATTCGCCAAGCGATTGCAATGTATGAAGA
ACAGCAGGCATTACTCAAAAAATTACTTGAATAA

Upstream 100 bases:

>100_bases
ACTGCAATTGCTTGTATACTAATCTCGCTGCAAAGCGTGGTTCAGCACACAGGCTGAATTCGCATTCCCCGCTTGAATCC
AACTAGCTTTTAGGTATTTT

Downstream 100 bases:

>100_bases
TAGTTGCTATAGCTCAACCTGCAATGTTTGCATGACTTTAGCCCGACCACCAGCCAACAAGCTCTGAATTGCCCCATCAA
CCAAGCTGAGTTGCACCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKDISDKYIRKRIDDYSINNSYSIVSRIVMRQYLQKNFLIGIVLFLFILIVSISMNGLFLVKMIAASIISIGLLSFFTFF
ETILYTDKKAYILFLIIKHFQQTNIQPYQLTTLKDITALEASIVGTKTASTLIIITILITLGPVIVQKVHPLATAIATIV
LLLILFTQILQGYADALIRQAIAMYEEQQALLKKLLE

Sequences:

>Translated_197_residues
MKDISDKYIRKRIDDYSINNSYSIVSRIVMRQYLQKNFLIGIVLFLFILIVSISMNGLFLVKMIAASIISIGLLSFFTFF
ETILYTDKKAYILFLIIKHFQQTNIQPYQLTTLKDITALEASIVGTKTASTLIIITILITLGPVIVQKVHPLATAIATIV
LLLILFTQILQGYADALIRQAIAMYEEQQALLKKLLE
>Mature_197_residues
MKDISDKYIRKRIDDYSINNSYSIVSRIVMRQYLQKNFLIGIVLFLFILIVSISMNGLFLVKMIAASIISIGLLSFFTFF
ETILYTDKKAYILFLIIKHFQQTNIQPYQLTTLKDITALEASIVGTKTASTLIIITILITLGPVIVQKVHPLATAIATIV
LLLILFTQILQGYADALIRQAIAMYEEQQALLKKLLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22353; Mature: 22353

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDISDKYIRKRIDDYSINNSYSIVSRIVMRQYLQKNFLIGIVLFLFILIVSISMNGLFL
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VKMIAASIISIGLLSFFTFFETILYTDKKAYILFLIIKHFQQTNIQPYQLTTLKDITALE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
ASIVGTKTASTLIIITILITLGPVIVQKVHPLATAIATIVLLLILFTQILQGYADALIRQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAMYEEQQALLKKLLE
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDISDKYIRKRIDDYSINNSYSIVSRIVMRQYLQKNFLIGIVLFLFILIVSISMNGLFL
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VKMIAASIISIGLLSFFTFFETILYTDKKAYILFLIIKHFQQTNIQPYQLTTLKDITALE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
ASIVGTKTASTLIIITILITLGPVIVQKVHPLATAIATIVLLLILFTQILQGYADALIRQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAMYEEQQALLKKLLE
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA