| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897091
Identifier: 159897091
GI number: 159897091
Start: 651670
End: 652398
Strand: Reverse
Name: 159897091
Synonym: Haur_0562
Alternate gene names: NA
Gene position: 652398-651670 (Counterclockwise)
Preceding gene: 159897092
Following gene: 159897090
Centisome position: 10.28
GC content: 58.3
Gene sequence:
>729_bases ATGATCGACGCGGTTGCCATTGCCAATCAATTCCGTGCTGAGCTTCAGGCCCAGAACGCGAGCGCGATGGACGATCTGAC CAAACGCTGGCGCACGGTCGAAGCGGCCTTGAAGGCGGAAATGGAAGCCTTGGCGTTTCAAATGAGCCAGGCTAAGGCCG ATGGGCAAACGGTCAGCGAGTCGCAGTTGTATGCGAACGAGCGCTACCAAGCGTTGTTGGTGCAGCTCCAGCGCGAACTG GCGAAATACAACGCGGATGCCGCCGCGATCATTCAGGCACAGCAGTTGAGTTTTGCCAGTATGGGCGCGGAGCAGGCCAC GGCGTGGTTGCGCTATTCCGGCGCGATTCAAGGGTCATTCACGCAGTTGAACAGCGGCGCATTTGAAAACATTGCCGCGC TGGCACGGGCTGACAATCCCTTGGCGCTCTTGCTGAGTAACGCCTATCCGGAAACGGCGCAAGCCATGACCGATGCCCTG TTGAGTGGCCTTGCATTGGGCAAAAACCCGCGCATCACGGCGCGAATGATGGTCAATGATGGCTTAGCAACCAGTCTCAA TCATGCCTTGTTAGTAACCCGTGATCAGTCGATTCGAGCATCACGCGTGGCTGCGTTGCAGCAGTATCAAACGAGTGGCT TAGCCGCCGCTTACATGCGCATCGCGGCACGCGGCGTACCTGTCTGGCCTGTTTGGCGCTCGATGGCACGGTCTATCCGA CCAACGTGA
Upstream 100 bases:
>100_bases AAAAGCAGGCTCGCAGCGCCCGAAGCTTAGGTGCAGCCTTGGCGATGCAGCAAGCACGGCTCGATAGTGGCGCTGCCAGC ACCGGATTGGAGCAGCCGCA
Downstream 100 bases:
>100_bases TGATGCCGTTGCATCCTCAGTGCAGATGTACATTACTGCCAATTTTAAGAGGCCGCGAGCCGCTGGCGATCCCAACGGGC AAGCAATGGTTTCTGGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSESQLYANERYQALLVQLQREL AKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSFTQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDAL LSGLALGKNPRITARMMVNDGLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR PT
Sequences:
>Translated_242_residues MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSESQLYANERYQALLVQLQREL AKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSFTQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDAL LSGLALGKNPRITARMMVNDGLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR PT >Mature_242_residues MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSESQLYANERYQALLVQLQREL AKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSFTQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDAL LSGLALGKNPRITARMMVNDGLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR PT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26238; Mature: 26238
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SQLYANERYQALLVQLQRELAKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCH TQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDALLSGLALGKNPRITARMMVND HHHCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC GLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR CCHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCC PT CC >Mature Secondary Structure MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH SQLYANERYQALLVQLQRELAKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCH TQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDALLSGLALGKNPRITARMMVND HHHCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC GLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR CCHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCC PT CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA