| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is mrp [H]
Identifier: 159896859
GI number: 159896859
Start: 390384
End: 391463
Strand: Direct
Name: mrp [H]
Synonym: Haur_0326
Alternate gene names: 159896859
Gene position: 390384-391463 (Clockwise)
Preceding gene: 159896858
Following gene: 159896860
Centisome position: 6.15
GC content: 51.94
Gene sequence:
>1080_bases ATGGGCTTGTTTGGGAAACGGGCGGATGCGCCAACACAAGAGGCAGTCTTGGCTGCCCTTGCAACGGTGCAAGAGCCAGA ACTCGGCGGCAATTTAGTTGCCCGCAAAATGATCAAAGAGCTTAACATTGATGGCGGACGAGTCGTTGTTTTGATCGATC TCACCACGCCAGCATGTCCATTCAAGGAACAACTGGCCAACGATGTGCGAGCAGCTTTGGCTCAAGTGCCAGGCGTGAGC GAAATCGAGGTCGATTTTACCGCGACCGTGCGGTCATACAATGGCATTCCTGATAAAGCCCGCGTGCCTGGGGTAAGCCA TATTTTGGCGGTAGCTTCAGGTAAAGGCGGCGTAGGTAAATCGACGGTTGCCGTCAACTTGGCCGTTGCTTTGGCCCAAG AAGGCGCAAACGTTGGCTTGCTCGATGCCGATATTTATGGGCCAAGCGCTCCCTTGATGACTGGCGCACGCGGCAAACCA GGCATTACGCAAAATCAAAAAATTGCCCCACTCGAAGCTCATGGCATCAAAATTATTTCGGTCGGCTATTTTGTTGATGA TAGCCAGCCCTTGGTTTGGCGTGGGCCGATGATTTCATCGATGTTGCGTCAATTTTTGTTCGAGGTTGATTGGGGTCAGC TTGATTATTTGATCGTCGATTTGCCACCTGGCACTGGCGATATTCAACTCACCTTGGCCCAATCAATTCCACTTTCTGGC TCGGTTGTGGTAACGACACCACAAGATGTAGCCCTTGCTGATGCGATTAAAGGCGTTGAGATGTTCCGCAAGTTGAATGT ACCCATCTTGGGGATTGTCGAGAACATGAGCTATTTTATCGCGCCCGATACTGGCAAGCGCTACGACATTTTTGGCCATG GTGGAGCACGAACCGCGAGCAGCAAATTGGGTGTACCATTCTTAGGTGAAATACCCTTGGGCATGCCAATTCGCGAAGGT GGCGATACTGGCCAGCCAGCGGTAACCCAAAGCGCCAAAGATGCCTATGCTGATTCGTTCCGCGATGTTGCTCGCACTTT AGCAGGCCGCATCAGTATTGAAACCATGGTGGCGGCCTAG
Upstream 100 bases:
>100_bases TAAGTCATAGCTAGTCGTGCTATAATCGTTCTAAATAGTACAACAAGATTGCTCAATGGTGCGCGACACTCGCATCATTG TTATAGGAGCGCATAGCACC
Downstream 100 bases:
>100_bases CGCCTTGCCACTGGCAACGCTTCAATGACGCATGGCTGCTGCTATGCGTCATTGTTGTCTGAAAGAGCAAGCCGATGATG CCGATTGAATTGTTGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MGLFGKRADAPTQEAVLAALATVQEPELGGNLVARKMIKELNIDGGRVVVLIDLTTPACPFKEQLANDVRAALAQVPGVS EIEVDFTATVRSYNGIPDKARVPGVSHILAVASGKGGVGKSTVAVNLAVALAQEGANVGLLDADIYGPSAPLMTGARGKP GITQNQKIAPLEAHGIKIISVGYFVDDSQPLVWRGPMISSMLRQFLFEVDWGQLDYLIVDLPPGTGDIQLTLAQSIPLSG SVVVTTPQDVALADAIKGVEMFRKLNVPILGIVENMSYFIAPDTGKRYDIFGHGGARTASSKLGVPFLGEIPLGMPIREG GDTGQPAVTQSAKDAYADSFRDVARTLAGRISIETMVAA
Sequences:
>Translated_359_residues MGLFGKRADAPTQEAVLAALATVQEPELGGNLVARKMIKELNIDGGRVVVLIDLTTPACPFKEQLANDVRAALAQVPGVS EIEVDFTATVRSYNGIPDKARVPGVSHILAVASGKGGVGKSTVAVNLAVALAQEGANVGLLDADIYGPSAPLMTGARGKP GITQNQKIAPLEAHGIKIISVGYFVDDSQPLVWRGPMISSMLRQFLFEVDWGQLDYLIVDLPPGTGDIQLTLAQSIPLSG SVVVTTPQDVALADAIKGVEMFRKLNVPILGIVENMSYFIAPDTGKRYDIFGHGGARTASSKLGVPFLGEIPLGMPIREG GDTGQPAVTQSAKDAYADSFRDVARTLAGRISIETMVAA >Mature_358_residues GLFGKRADAPTQEAVLAALATVQEPELGGNLVARKMIKELNIDGGRVVVLIDLTTPACPFKEQLANDVRAALAQVPGVSE IEVDFTATVRSYNGIPDKARVPGVSHILAVASGKGGVGKSTVAVNLAVALAQEGANVGLLDADIYGPSAPLMTGARGKPG ITQNQKIAPLEAHGIKIISVGYFVDDSQPLVWRGPMISSMLRQFLFEVDWGQLDYLIVDLPPGTGDIQLTLAQSIPLSGS VVVTTPQDVALADAIKGVEMFRKLNVPILGIVENMSYFIAPDTGKRYDIFGHGGARTASSKLGVPFLGEIPLGMPIREGG DTGQPAVTQSAKDAYADSFRDVARTLAGRISIETMVAA
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=260, Percent_Identity=49.2307692307692, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI6912540, Length=218, Percent_Identity=42.6605504587156, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI118572611, Length=237, Percent_Identity=42.1940928270042, Blast_Score=177, Evalue=1e-44, Organism=Escherichia coli, GI87082045, Length=354, Percent_Identity=43.5028248587571, Blast_Score=270, Evalue=1e-73, Organism=Caenorhabditis elegans, GI25143050, Length=260, Percent_Identity=35.3846153846154, Blast_Score=165, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6322188, Length=228, Percent_Identity=40.7894736842105, Blast_Score=182, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6321347, Length=247, Percent_Identity=38.4615384615385, Blast_Score=160, Evalue=2e-40, Organism=Drosophila melanogaster, GI221511043, Length=254, Percent_Identity=39.7637795275591, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24667611, Length=216, Percent_Identity=40.7407407407407, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI19921440, Length=235, Percent_Identity=41.2765957446808, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37668; Mature: 37537
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFGKRADAPTQEAVLAALATVQEPELGGNLVARKMIKELNIDGGRVVVLIDLTTPACP CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC FKEQLANDVRAALAQVPGVSEIEVDFTATVRSYNGIPDKARVPGVSHILAVASGKGGVGK HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHEEEEEECCCCCCCC STVAVNLAVALAQEGANVGLLDADIYGPSAPLMTGARGKPGITQNQKIAPLEAHGIKIIS CEEEEEEEEEEHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCEECCCEEEEE VGYFVDDSQPLVWRGPMISSMLRQFLFEVDWGQLDYLIVDLPPGTGDIQLTLAQSIPLSG EEEEEECCCCEEEECHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC SVVVTTPQDVALADAIKGVEMFRKLNVPILGIVENMSYFIAPDTGKRYDIFGHGGARTAS CEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCC SKLGVPFLGEIPLGMPIREGGDTGQPAVTQSAKDAYADSFRDVARTLAGRISIETMVAA CCCCCCEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure GLFGKRADAPTQEAVLAALATVQEPELGGNLVARKMIKELNIDGGRVVVLIDLTTPACP CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC FKEQLANDVRAALAQVPGVSEIEVDFTATVRSYNGIPDKARVPGVSHILAVASGKGGVGK HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHEEEEEECCCCCCCC STVAVNLAVALAQEGANVGLLDADIYGPSAPLMTGARGKPGITQNQKIAPLEAHGIKIIS CEEEEEEEEEEHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCEECCCEEEEE VGYFVDDSQPLVWRGPMISSMLRQFLFEVDWGQLDYLIVDLPPGTGDIQLTLAQSIPLSG EEEEEECCCCEEEECHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCC SVVVTTPQDVALADAIKGVEMFRKLNVPILGIVENMSYFIAPDTGKRYDIFGHGGARTAS CEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCC SKLGVPFLGEIPLGMPIREGGDTGQPAVTQSAKDAYADSFRDVARTLAGRISIETMVAA CCCCCCEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]