Click here to switch to the map view.

The map label for this gene is 159896857

Identifier: 159896857

GI number: 159896857

Start: 385895

End: 387979

Strand: Direct

Name: 159896857

Synonym: Haur_0324

Alternate gene names: NA

Gene position: 385895-387979 (Clockwise)

Preceding gene: 159896856

Following gene: 159896858

Centisome position: 6.08

GC content: 52.33

Gene sequence:

>2085_bases
ATGTGGTCGAACCTGAGCCGTTCGCGGTCGTTGTTGACCATTGCGCTCCTTGGGGTCTTGCTTGGTTCACTGAGTTTGTT
ACCAACGCACACCACCAAGGCCGCGATTACCGCCTATCAAGCCGCCGATCCAAATCTCGCCCCGTATGCCCAAAATGTGC
TCGATCGTTTTGTCCAATACAAAGGTCAGTATTGGCTAGGTGGTCAGCAAGAAGTTCACTGGGATAATTCGCGCAAAGAT
GAAATGTCGAACGCAGTTTTTGCCCGCACCAATCCACAACGCTACCCCGCGCTGCGTGGCTGGGATTTCCCGATCGGCGG
CGCACTGCCCAACGATGGCCAATGGATGATCGACGCGATCATCAGCGATTGGACCAATGCCAACGTTATTCCAACCATCA
GCCAACACTGGACACCGCTTGCCAGCCAAGGCACTAACCATCAAGATATGTTCACGGTGGTTGATATTGATCGGATGTTT
GTTGATGGCACGACTGAACGCACTAATTATCTGATTTGGCTCGATAATATTGCTGATGATTTGCAACAGCTCGAAGATGC
CAACGTGCCAGTGCTATGGCGACCCTACCACGAAGCTGGTGGTGGTTGGTTCTGGTGGGATAAAGATAATGGAGCCACCA
ATTATCGCCGCCTTTGGGATGATATGTTTACCTATTTGGTAACCACCCGTGGCCTGCACAACCTGATCTGGGTTTGGACA
CCTGGGGTAAAAGGAGTCAGCACGGCTTGGTATCCCGCTGGCCAAGCCGATATTTTGGGCAGCGATGTATATAACGAAAC
TTCGGGCAATTACGTGAGTTGGTATGAAGATCTTGGGCGTTTCTCGCAAACCAAGATTAAAGCCCTCAGCGAAACCGACT
ACATGATGGACCCTGCTCTGTTGAGCAGTGCGCCATTTGCCTACTTTATGATTTGGCACACCGATATGTTTTATCGCAAT
ACCGATAGCCGCATTCAAAGCACCTATGCGCATTGGGCAACCCTGAATCGAACCAATGTTGGCCAGATTTGGAATGGTAC
TCTTGGGATCGCTCCCACAGCAACGCCTGGTACACCAACGCCTACGCCAATTCCTGGGATCGTGGTCAGCGATTTTGAAG
ATGGCACGCTGCAGGGCTGGACTGGCACAAACCTGGTTTCAGGGCCAACTGTCAACAACGAATGGGCCGCCAATGGTCAA
CGTTCGATCAAAGCTCAAGTTAATTTAGCCGCTACGCCTGCCGATATTCGGCTCGCACAAGCACTGGATTTAACTGGTCA
ATCACGCATCCAAATTCGCCTGAGTGCCCAAAATGTTGGGAGCGGTCTCAGTGCTAAGCTCTACATCAAGACGGGAAGCG
CCTGGAATTGGAAAGATAGCGGAACTGTGCTGATCGATTCGGGCATCAGCTTGCTGACAATTGAATTAGCGGGTGTGCCT
GATATCAACCAAGTGCGCGAGTTGGGGGTTGAATTCAACGCACTCACGGGGAATAGTGGCACAGCAACGATCTACGCCGA
CTATCTGACCGTGGGTGTGGTCAATAGCAACCAACCAACCCCAACCACGGGGCCAACGGCGACTGCAACGCGCACGCCAA
CCCAAGCGCCAACGGCTACGCCAACCAATATTCCAACCGCAACGCGCACGCCAACCCAAGGCCCAACCGCGACTGCAACC
ACCATTCCAACCGTCACGCCAACGAATATTCCAACCGCAACGCGCACGCCAACCCAAGTGCCAACTGCTACGCCAACCAG
CACTGGCGGCGCTTGTAAGGTTGATTTCAAGGTGACAAGCCAATGGGGCGTAGGCTTTATCGCCGATGTTACCGTAACCA
ATTTGCAGCCAAGCGCCTTAAATGACTGGAATGTGAAATTCAACTTCCCCAGTGGCCAAACCATCAGCAACCTATGGAAT
GGCACACTCAGCCAGACTGGTAGCGCAGTTACCGTCACGAATGCTGGCTGGAATGGCTATCTTGCAGGTAATGGTGGCAC
AGCCAACTTTGGTTTCCAAGGTGTTGGTAGTGTTCCAATCTTGCCAAGCAACAGCTTCCAACTCAATGGCGTAACCTGCC
AATAA

Upstream 100 bases:

>100_bases
ACTCTTGGACATTCGCACGCGTAGCCATCGCATTCTCGCCTCGTTCTTACCACGATCAATACCCAATGCTGAGTGTCCTC
AATCAAAGGAGATTGTCGCC

Downstream 100 bases:

>100_bases
ACTCAATCGCAACGGCATAACGACGATCTCAGCAATGGGATCGTCGTTGGTATTTAAGCACCTAGGTGCTAGCTCGAAGC
TGGTATGATGAAACAACTGG

Product: cellulose-binding family II protein

Products: NA

Alternate protein names: Beta-mannanase; Endo-1,4-mannanase [H]

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MWSNLSRSRSLLTIALLGVLLGSLSLLPTHTTKAAITAYQAADPNLAPYAQNVLDRFVQYKGQYWLGGQQEVHWDNSRKD
EMSNAVFARTNPQRYPALRGWDFPIGGALPNDGQWMIDAIISDWTNANVIPTISQHWTPLASQGTNHQDMFTVVDIDRMF
VDGTTERTNYLIWLDNIADDLQQLEDANVPVLWRPYHEAGGGWFWWDKDNGATNYRRLWDDMFTYLVTTRGLHNLIWVWT
PGVKGVSTAWYPAGQADILGSDVYNETSGNYVSWYEDLGRFSQTKIKALSETDYMMDPALLSSAPFAYFMIWHTDMFYRN
TDSRIQSTYAHWATLNRTNVGQIWNGTLGIAPTATPGTPTPTPIPGIVVSDFEDGTLQGWTGTNLVSGPTVNNEWAANGQ
RSIKAQVNLAATPADIRLAQALDLTGQSRIQIRLSAQNVGSGLSAKLYIKTGSAWNWKDSGTVLIDSGISLLTIELAGVP
DINQVRELGVEFNALTGNSGTATIYADYLTVGVVNSNQPTPTTGPTATATRTPTQAPTATPTNIPTATRTPTQGPTATAT
TIPTVTPTNIPTATRTPTQVPTATPTSTGGACKVDFKVTSQWGVGFIADVTVTNLQPSALNDWNVKFNFPSGQTISNLWN
GTLSQTGSAVTVTNAGWNGYLAGNGGTANFGFQGVGSVPILPSNSFQLNGVTCQ

Sequences:

>Translated_694_residues
MWSNLSRSRSLLTIALLGVLLGSLSLLPTHTTKAAITAYQAADPNLAPYAQNVLDRFVQYKGQYWLGGQQEVHWDNSRKD
EMSNAVFARTNPQRYPALRGWDFPIGGALPNDGQWMIDAIISDWTNANVIPTISQHWTPLASQGTNHQDMFTVVDIDRMF
VDGTTERTNYLIWLDNIADDLQQLEDANVPVLWRPYHEAGGGWFWWDKDNGATNYRRLWDDMFTYLVTTRGLHNLIWVWT
PGVKGVSTAWYPAGQADILGSDVYNETSGNYVSWYEDLGRFSQTKIKALSETDYMMDPALLSSAPFAYFMIWHTDMFYRN
TDSRIQSTYAHWATLNRTNVGQIWNGTLGIAPTATPGTPTPTPIPGIVVSDFEDGTLQGWTGTNLVSGPTVNNEWAANGQ
RSIKAQVNLAATPADIRLAQALDLTGQSRIQIRLSAQNVGSGLSAKLYIKTGSAWNWKDSGTVLIDSGISLLTIELAGVP
DINQVRELGVEFNALTGNSGTATIYADYLTVGVVNSNQPTPTTGPTATATRTPTQAPTATPTNIPTATRTPTQGPTATAT
TIPTVTPTNIPTATRTPTQVPTATPTSTGGACKVDFKVTSQWGVGFIADVTVTNLQPSALNDWNVKFNFPSGQTISNLWN
GTLSQTGSAVTVTNAGWNGYLAGNGGTANFGFQGVGSVPILPSNSFQLNGVTCQ
>Mature_694_residues
MWSNLSRSRSLLTIALLGVLLGSLSLLPTHTTKAAITAYQAADPNLAPYAQNVLDRFVQYKGQYWLGGQQEVHWDNSRKD
EMSNAVFARTNPQRYPALRGWDFPIGGALPNDGQWMIDAIISDWTNANVIPTISQHWTPLASQGTNHQDMFTVVDIDRMF
VDGTTERTNYLIWLDNIADDLQQLEDANVPVLWRPYHEAGGGWFWWDKDNGATNYRRLWDDMFTYLVTTRGLHNLIWVWT
PGVKGVSTAWYPAGQADILGSDVYNETSGNYVSWYEDLGRFSQTKIKALSETDYMMDPALLSSAPFAYFMIWHTDMFYRN
TDSRIQSTYAHWATLNRTNVGQIWNGTLGIAPTATPGTPTPTPIPGIVVSDFEDGTLQGWTGTNLVSGPTVNNEWAANGQ
RSIKAQVNLAATPADIRLAQALDLTGQSRIQIRLSAQNVGSGLSAKLYIKTGSAWNWKDSGTVLIDSGISLLTIELAGVP
DINQVRELGVEFNALTGNSGTATIYADYLTVGVVNSNQPTPTTGPTATATRTPTQAPTATPTNIPTATRTPTQGPTATAT
TIPTVTPTNIPTATRTPTQVPTATPTSTGGACKVDFKVTSQWGVGFIADVTVTNLQPSALNDWNVKFNFPSGQTISNLWN
GTLSQTGSAVTVTNAGWNGYLAGNGGTANFGFQGVGSVPILPSNSFQLNGVTCQ

Specific function: Unknown

COG id: COG4124

COG function: function code G; Beta-mannanase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 26 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022790
- InterPro:   IPR008979
- InterPro:   IPR000805
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02156 Glyco_hydro_26 [H]

EC number: =3.2.1.78 [H]

Molecular weight: Translated: 75338; Mature: 75338

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSNLSRSRSLLTIALLGVLLGSLSLLPTHTTKAAITAYQAADPNLAPYAQNVLDRFVQY
CCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
KGQYWLGGQQEVHWDNSRKDEMSNAVFARTNPQRYPALRGWDFPIGGALPNDGQWMIDAI
CCCEEECCCEEECCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEH
ISDWTNANVIPTISQHWTPLASQGTNHQDMFTVVDIDRMFVDGTTERTNYLIWLDNIADD
HHCCCCCCEEECHHHCCCCHHHCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEECHHHHH
LQQLEDANVPVLWRPYHEAGGGWFWWDKDNGATNYRRLWDDMFTYLVTTRGLHNLIWVWT
HHHHHCCCCCEEEECHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PGVKGVSTAWYPAGQADILGSDVYNETSGNYVSWYEDLGRFSQTKIKALSETDYMMDPAL
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LSSAPFAYFMIWHTDMFYRNTDSRIQSTYAHWATLNRTNVGQIWNGTLGIAPTATPGTPT
HCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHEECCCCCCCCEECCEEECCCCCCCCCCC
PTPIPGIVVSDFEDGTLQGWTGTNLVSGPTVNNEWAANGQRSIKAQVNLAATPADIRLAQ
CCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHEEEEH
ALDLTGQSRIQIRLSAQNVGSGLSAKLYIKTGSAWNWKDSGTVLIDSGISLLTIELAGVP
HHCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCC
DINQVRELGVEFNALTGNSGTATIYADYLTVGVVNSNQPTPTTGPTATATRTPTQAPTAT
CHHHHHHCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PTNIPTATRTPTQGPTATATTIPTVTPTNIPTATRTPTQVPTATPTSTGGACKVDFKVTS
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
QWGVGFIADVTVTNLQPSALNDWNVKFNFPSGQTISNLWNGTLSQTGSAVTVTNAGWNGY
CCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHCCHHHCCCCEEEEEECCCCEE
LAGNGGTANFGFQGVGSVPILPSNSFQLNGVTCQ
EECCCCCCCCCCCCCCCCEECCCCCEEECCEEEC
>Mature Secondary Structure
MWSNLSRSRSLLTIALLGVLLGSLSLLPTHTTKAAITAYQAADPNLAPYAQNVLDRFVQY
CCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
KGQYWLGGQQEVHWDNSRKDEMSNAVFARTNPQRYPALRGWDFPIGGALPNDGQWMIDAI
CCCEEECCCEEECCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEH
ISDWTNANVIPTISQHWTPLASQGTNHQDMFTVVDIDRMFVDGTTERTNYLIWLDNIADD
HHCCCCCCEEECHHHCCCCHHHCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEECHHHHH
LQQLEDANVPVLWRPYHEAGGGWFWWDKDNGATNYRRLWDDMFTYLVTTRGLHNLIWVWT
HHHHHCCCCCEEEECHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PGVKGVSTAWYPAGQADILGSDVYNETSGNYVSWYEDLGRFSQTKIKALSETDYMMDPAL
CCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LSSAPFAYFMIWHTDMFYRNTDSRIQSTYAHWATLNRTNVGQIWNGTLGIAPTATPGTPT
HCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHEECCCCCCCCEECCEEECCCCCCCCCCC
PTPIPGIVVSDFEDGTLQGWTGTNLVSGPTVNNEWAANGQRSIKAQVNLAATPADIRLAQ
CCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHEEEEH
ALDLTGQSRIQIRLSAQNVGSGLSAKLYIKTGSAWNWKDSGTVLIDSGISLLTIELAGVP
HHCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCC
DINQVRELGVEFNALTGNSGTATIYADYLTVGVVNSNQPTPTTGPTATATRTPTQAPTAT
CHHHHHHCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PTNIPTATRTPTQGPTATATTIPTVTPTNIPTATRTPTQVPTATPTSTGGACKVDFKVTS
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
QWGVGFIADVTVTNLQPSALNDWNVKFNFPSGQTISNLWNGTLSQTGSAVTVTNAGWNGY
CCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHCCHHHCCCCEEEEEECCCCEE
LAGNGGTANFGFQGVGSVPILPSNSFQLNGVTCQ
EECCCCCCCCCCCCCCCCEECCCCCEEECCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2694961 [H]