| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896856
Identifier: 159896856
GI number: 159896856
Start: 385095
End: 385631
Strand: Direct
Name: 159896856
Synonym: Haur_0323
Alternate gene names: NA
Gene position: 385095-385631 (Clockwise)
Preceding gene: 159896855
Following gene: 159896857
Centisome position: 6.07
GC content: 48.23
Gene sequence:
>537_bases ATGAGTGATGAGTTTGTGGCGTTTCCCAAAATTGCGCGGCTTTCGCGCCAAGTGATTGTGACCGAGAAAATTGATGGTAC GAATGCTTGTATTGCAATCGACGAACAAGGCCAAATACGCGCTGGCAGCCGTAGTCAATGGCTAACTGTGGAGCACGATA ATTATGGCTTTGCCGTGTGGGTTGCCGCCAACCACAATGCTTTACTTGAATTAGGCGTTGGCACGCACCATGGCGAGTGG TTTGGCCACCGAATTGGTAAGCGCCAATATGGCTTGAATGAACGGCGTTTTGCCTTGTTCAATACTTCGCGTTGGAATGC CGAGAATCGCCCTGCTTGCTGTGAGGTTGTGCCAGTGCTCTACGATGGCGTATTTGATACTGCCAAGATTGATGCATTCT TAGAAGATTTACGGCTCAATGGTAGCCGCATGGTTGCGGGATTCATGCAGCCTGAGGGTGTGATTATCTATCATACTGCT GCCAATATTTTTTTCAAAAAGACCATGCCCAACGATGGAGCCAAAGGTAAAACCTAA
Upstream 100 bases:
>100_bases GAGGGGCTTTTTGTTAAATCCCCAACTTGCGACTGATTACGCCCCAAATCATTGTGATTATGCTGGCTATGATCAACTCT GATCGCAGACGAGGTGAACG
Downstream 100 bases:
>100_bases ATATTACTAAAACAACAGCCTAAAATACTGCAAAAGCCACAGGATAGTTGCGTATCTGGCGGCTTTTTGCAGTTAAATTC TAAAGAAATACTTAAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSDEFVAFPKIARLSRQVIVTEKIDGTNACIAIDEQGQIRAGSRSQWLTVEHDNYGFAVWVAANHNALLELGVGTHHGEW FGHRIGKRQYGLNERRFALFNTSRWNAENRPACCEVVPVLYDGVFDTAKIDAFLEDLRLNGSRMVAGFMQPEGVIIYHTA ANIFFKKTMPNDGAKGKT
Sequences:
>Translated_178_residues MSDEFVAFPKIARLSRQVIVTEKIDGTNACIAIDEQGQIRAGSRSQWLTVEHDNYGFAVWVAANHNALLELGVGTHHGEW FGHRIGKRQYGLNERRFALFNTSRWNAENRPACCEVVPVLYDGVFDTAKIDAFLEDLRLNGSRMVAGFMQPEGVIIYHTA ANIFFKKTMPNDGAKGKT >Mature_177_residues SDEFVAFPKIARLSRQVIVTEKIDGTNACIAIDEQGQIRAGSRSQWLTVEHDNYGFAVWVAANHNALLELGVGTHHGEWF GHRIGKRQYGLNERRFALFNTSRWNAENRPACCEVVPVLYDGVFDTAKIDAFLEDLRLNGSRMVAGFMQPEGVIIYHTAA NIFFKKTMPNDGAKGKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19960; Mature: 19829
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEFVAFPKIARLSRQVIVTEKIDGTNACIAIDEQGQIRAGSRSQWLTVEHDNYGFAVW CCCCEECCHHHHHCCEEEEEEEECCCCCEEEEECCCCCEEECCCCCEEEEEECCCCEEEE VAANHNALLELGVGTHHGEWFGHRIGKRQYGLNERRFALFNTSRWNAENRPACCEVVPVL EEECCCEEEEECCCCCCCHHHHHHCCCHHCCCCCCEEEEEECCCCCCCCCCCHHEEHHHH YDGVFDTAKIDAFLEDLRLNGSRMVAGFMQPEGVIIYHTAANIFFKKTMPNDGAKGKT HCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCC >Mature Secondary Structure SDEFVAFPKIARLSRQVIVTEKIDGTNACIAIDEQGQIRAGSRSQWLTVEHDNYGFAVW CCCEECCHHHHHCCEEEEEEEECCCCCEEEEECCCCCEEECCCCCEEEEEECCCCEEEE VAANHNALLELGVGTHHGEWFGHRIGKRQYGLNERRFALFNTSRWNAENRPACCEVVPVL EEECCCEEEEECCCCCCCHHHHHHCCCHHCCCCCCEEEEEECCCCCCCCCCCHHEEHHHH YDGVFDTAKIDAFLEDLRLNGSRMVAGFMQPEGVIIYHTAANIFFKKTMPNDGAKGKT HCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA