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The map label for this gene is yfbQ [C]

Identifier: 159896650

GI number: 159896650

Start: 151209

End: 152342

Strand: Direct

Name: yfbQ [C]

Synonym: Haur_0117

Alternate gene names: 159896650

Gene position: 151209-152342 (Clockwise)

Preceding gene: 159896649

Following gene: 159896651

Centisome position: 2.38

GC content: 48.24

Gene sequence:

>1134_bases
GTGGTTTTTGATGATACTGATTTAACGCCCAACCGGATTGAAATGGCTCGTCGCGCTGCGACGGGTCATTTTATTGATCT
GACCAGTAGTAACCCAACGCAGCAAGATTTGCTTTTTCCGCCCGATGTGCTGGAGCAAGCCGCCCAAAAATATTGGTCAC
AACGGTGCTACGAGCCAAATCCACGCGGTTTGGAGCCAACTCGGCAGGCAATTATTGATTATTATGCTCAGCGCAGGCCA
GCTTTGGCGCTAACGCTTGATGATATTTTTATTACTGCCAGCACCAGCGAGGCCTATAGTTTGTTGTTCTCGTTGCTCAC
CGCACCAGGCGATAATATTCTTGGGCCAAATGTCACCTATCCATTGTTTGAATATTTGGCCGATTTGCATCACGTTGAGT
TGCGTACCTACGAGCTTGATCCTGCTAACAATTGGGTGATCGATCAGGCTTCGTTGCTGGCCGCTGCTGATCAGAACACA
CGGGCGATTTTATTAATTTCACCGCATAATCCAACTGGGGCAATTATTAGCGAGCCAATCGCCGCATTAAATCAACTAGG
AATTCCATTGATTTGCGATGAAGTGTTTGCGCCGTTTGCGTTGGCCAAATCGCATGTGCCAGCATTAGGCGGGCTGCATC
CCGACGTACCCGTATTTCAATTGAATGGCATTTCTAAGCTCTTAGCCTTGCCCGACCTCAAACTAGGCTGGATTGCGCTG
AATCAAGCGGCTCAAGGCTATGCAGAGCGTTTAGAACTGATCAACGATACCTTTTTGAGTTGTAGCACATTAATTCAGAC
GATGCTGCCCGATTTGTTGCATGCTGCGCCGCCGTTTATCGATCAGATGCTTGAGCGAGTGCGAGCGAATATTGCCTATG
CCCGTGAGCATTTAGCCCAGCACCCACGCTTGATTTGGAGCGAGCCAGATGGTGGCTATTATTTATTTTTGCAAGTACGC
GATGAATTCGATGATGAAGCCTTGGTCGTGCGTTTGATCGAACAAGGGGTGTTGGTGCATCCAGGCTTCTTTTTCGATTG
GATCGATGATTGTCGGATTATGCTCTCGGCCTTGACCGAACCGCACCAATGGCAAGCAGGTATCCAAAAATTGGCTCAGA
TTCTTACAATTTGA

Upstream 100 bases:

>100_bases
TGGGGATTACTTGGGAAGGCCTGCGCACCGCTGGCTCGTTGCGTGATGGAATTGCCAAAATTATCGCTGAAAAGAATATT
GCAATTTAGGAATTTGGCTT

Downstream 100 bases:

>100_bases
CAAGCAATCAATCTTCGGCTATAATCAGCTGCGCTGTCGGAATACGGCAGGTTTACAAAAAAAGCGGGTAGGTACCAGAG
TGGCCAAATGGGGCGGACTG

Product: class I and II aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MVFDDTDLTPNRIEMARRAATGHFIDLTSSNPTQQDLLFPPDVLEQAAQKYWSQRCYEPNPRGLEPTRQAIIDYYAQRRP
ALALTLDDIFITASTSEAYSLLFSLLTAPGDNILGPNVTYPLFEYLADLHHVELRTYELDPANNWVIDQASLLAAADQNT
RAILLISPHNPTGAIISEPIAALNQLGIPLICDEVFAPFALAKSHVPALGGLHPDVPVFQLNGISKLLALPDLKLGWIAL
NQAAQGYAERLELINDTFLSCSTLIQTMLPDLLHAAPPFIDQMLERVRANIAYAREHLAQHPRLIWSEPDGGYYLFLQVR
DEFDDEALVVRLIEQGVLVHPGFFFDWIDDCRIMLSALTEPHQWQAGIQKLAQILTI

Sequences:

>Translated_377_residues
MVFDDTDLTPNRIEMARRAATGHFIDLTSSNPTQQDLLFPPDVLEQAAQKYWSQRCYEPNPRGLEPTRQAIIDYYAQRRP
ALALTLDDIFITASTSEAYSLLFSLLTAPGDNILGPNVTYPLFEYLADLHHVELRTYELDPANNWVIDQASLLAAADQNT
RAILLISPHNPTGAIISEPIAALNQLGIPLICDEVFAPFALAKSHVPALGGLHPDVPVFQLNGISKLLALPDLKLGWIAL
NQAAQGYAERLELINDTFLSCSTLIQTMLPDLLHAAPPFIDQMLERVRANIAYAREHLAQHPRLIWSEPDGGYYLFLQVR
DEFDDEALVVRLIEQGVLVHPGFFFDWIDDCRIMLSALTEPHQWQAGIQKLAQILTI
>Mature_377_residues
MVFDDTDLTPNRIEMARRAATGHFIDLTSSNPTQQDLLFPPDVLEQAAQKYWSQRCYEPNPRGLEPTRQAIIDYYAQRRP
ALALTLDDIFITASTSEAYSLLFSLLTAPGDNILGPNVTYPLFEYLADLHHVELRTYELDPANNWVIDQASLLAAADQNT
RAILLISPHNPTGAIISEPIAALNQLGIPLICDEVFAPFALAKSHVPALGGLHPDVPVFQLNGISKLLALPDLKLGWIAL
NQAAQGYAERLELINDTFLSCSTLIQTMLPDLLHAAPPFIDQMLERVRANIAYAREHLAQHPRLIWSEPDGGYYLFLQVR
DEFDDEALVVRLIEQGVLVHPGFFFDWIDDCRIMLSALTEPHQWQAGIQKLAQILTI

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4507369, Length=310, Percent_Identity=25.8064516129032, Blast_Score=115, Evalue=5e-26,
Organism=Escherichia coli, GI1788627, Length=341, Percent_Identity=26.6862170087977, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787710, Length=324, Percent_Identity=25.9259259259259, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17567663, Length=351, Percent_Identity=24.5014245014245, Blast_Score=101, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6320317, Length=328, Percent_Identity=26.5243902439024, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI18859735, Length=310, Percent_Identity=28.3870967741935, Blast_Score=126, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 42195; Mature: 42195

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFDDTDLTPNRIEMARRAATGHFIDLTSSNPTQQDLLFPPDVLEQAAQKYWSQRCYEPN
CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PRGLEPTRQAIIDYYAQRRPALALTLDDIFITASTSEAYSLLFSLLTAPGDNILGPNVTY
CCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCH
PLFEYLADLHHVELRTYELDPANNWVIDQASLLAAADQNTRAILLISPHNPTGAIISEPI
HHHHHHHHHHHHEEEEEEECCCCCEEECHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH
AALNQLGIPLICDEVFAPFALAKSHVPALGGLHPDVPVFQLNGISKLLALPDLKLGWIAL
HHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCHHEEH
NQAAQGYAERLELINDTFLSCSTLIQTMLPDLLHAAPPFIDQMLERVRANIAYAREHLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
HPRLIWSEPDGGYYLFLQVRDEFDDEALVVRLIEQGVLVHPGFFFDWIDDCRIMLSALTE
CCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCC
PHQWQAGIQKLAQILTI
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVFDDTDLTPNRIEMARRAATGHFIDLTSSNPTQQDLLFPPDVLEQAAQKYWSQRCYEPN
CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PRGLEPTRQAIIDYYAQRRPALALTLDDIFITASTSEAYSLLFSLLTAPGDNILGPNVTY
CCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCH
PLFEYLADLHHVELRTYELDPANNWVIDQASLLAAADQNTRAILLISPHNPTGAIISEPI
HHHHHHHHHHHHEEEEEEECCCCCEEECHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH
AALNQLGIPLICDEVFAPFALAKSHVPALGGLHPDVPVFQLNGISKLLALPDLKLGWIAL
HHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCHHEEH
NQAAQGYAERLELINDTFLSCSTLIQTMLPDLLHAAPPFIDQMLERVRANIAYAREHLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
HPRLIWSEPDGGYYLFLQVRDEFDDEALVVRLIEQGVLVHPGFFFDWIDDCRIMLSALTE
CCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCC
PHQWQAGIQKLAQILTI
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]