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The map label for this gene is ycfF [C]

Identifier: 15921763

GI number: 15921763

Start: 1473141

End: 1473566

Strand: Direct

Name: ycfF [C]

Synonym: ST1471

Alternate gene names: 15921763

Gene position: 1473141-1473566 (Clockwise)

Preceding gene: 15921761

Following gene: 15921774

Centisome position: 54.67

GC content: 30.28

Gene sequence:

>426_bases
ATGCAAGTAGATAATTGTATATTTTGTAAAATAGTTAAAGGAGAGATAAAATCACAAAAAGTCTATGAGGACCAAGAAAT
AATGGCATTTTTAGATATTAATCCAGTTAATAAGGGTCATGTTCTAGTAATTCCTAAAGATCATTATGAAAATATTTTCG
ATGTTCCAAAAGAGAAATTAGGCAAAGTGATAGAAGTTGTACAGAAAGTTGCAATAGCGTTAAGAAAGATGGGAGCAGAT
GGGGTAAATATTGTATCTAACAATGGTAAAGCGGCTGAACAACATATATTTCATCTACATATTCACGTAATTCCAAGATA
TTTTAATGATGGAAAAGATATTGACTCCATGTCTAAAAGGACAAAATATAACGATGAAAAGGAAATGTCAGAATATGCTG
AGAAGATAAGATTATTCCTCATCTGA

Upstream 100 bases:

>100_bases
TTTTTTAGGTTTAATACGTATTTAGCTTCTACGTTAGATATTTTCATCAGTTTATAGTAAAGGAAGCAAAACATTAAAGT
TTTTACTCTATTTATAATCG

Downstream 100 bases:

>100_bases
CTCTGTTTCTTCACTTAATTCTTCTCTTAATAGTTCTAATCCAACTTCTTTATAATATTCTTCTCTTTCTTGTTCTAATT
GCTCTTCCTCTAATTTTCTC

Product: histidine triad nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MQVDNCIFCKIVKGEIKSQKVYEDQEIMAFLDINPVNKGHVLVIPKDHYENIFDVPKEKLGKVIEVVQKVAIALRKMGAD
GVNIVSNNGKAAEQHIFHLHIHVIPRYFNDGKDIDSMSKRTKYNDEKEMSEYAEKIRLFLI

Sequences:

>Translated_141_residues
MQVDNCIFCKIVKGEIKSQKVYEDQEIMAFLDINPVNKGHVLVIPKDHYENIFDVPKEKLGKVIEVVQKVAIALRKMGAD
GVNIVSNNGKAAEQHIFHLHIHVIPRYFNDGKDIDSMSKRTKYNDEKEMSEYAEKIRLFLI
>Mature_141_residues
MQVDNCIFCKIVKGEIKSQKVYEDQEIMAFLDINPVNKGHVLVIPKDHYENIFDVPKEKLGKVIEVVQKVAIALRKMGAD
GVNIVSNNGKAAEQHIFHLHIHVIPRYFNDGKDIDSMSKRTKYNDEKEMSEYAEKIRLFLI

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17506713, Length=108, Percent_Identity=39.8148148148148, Blast_Score=79, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6320078, Length=101, Percent_Identity=43.5643564356436, Blast_Score=93, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28574010, Length=105, Percent_Identity=36.1904761904762, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581222, Length=105, Percent_Identity=36.1904761904762, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 16257; Mature: 16257

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVDNCIFCKIVKGEIKSQKVYEDQEIMAFLDINPVNKGHVLVIPKDHYENIFDVPKEKL
CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHHCCCHHHH
GKVIEVVQKVAIALRKMGADGVNIVSNNGKAAEQHIFHLHIHVIPRYFNDGKDIDSMSKR
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHEEEEEEEEEEECCCCCCCCHHHHHHH
TKYNDEKEMSEYAEKIRLFLI
CCCCCHHHHHHHHHHHHEECC
>Mature Secondary Structure
MQVDNCIFCKIVKGEIKSQKVYEDQEIMAFLDINPVNKGHVLVIPKDHYENIFDVPKEKL
CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHHCCCHHHH
GKVIEVVQKVAIALRKMGADGVNIVSNNGKAAEQHIFHLHIHVIPRYFNDGKDIDSMSKR
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHEEEEEEEEEEECCCCCCCCHHHHHHH
TKYNDEKEMSEYAEKIRLFLI
CCCCCHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]