| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yitW [H]
Identifier: 15921760
GI number: 15921760
Start: 1469470
End: 1469877
Strand: Direct
Name: yitW [H]
Synonym: ST1468
Alternate gene names: 15921760
Gene position: 1469470-1469877 (Clockwise)
Preceding gene: 15921759
Following gene: 15921761
Centisome position: 54.53
GC content: 34.56
Gene sequence:
>408_bases ATGTCTACTCAGCAAAATATTAACAAAGAGGAATGGAAGAAAAAGATTATGGAAGCTTTAACGCAAGTTTATGACCCAGA AATTCCAGTAGATATTGTAAATTTAGGTCTTATTTATGAATTAAAAATTAGCGATGAAGGGGATGTTTATGTTCGTATGG GATTAACGGCTCCTGGTTGCCCTGTTGTAGATGATTTAATTTATACAGTGGAGCAAGTAATTAAAGAAACAGTTCCTGCA AAATCAGTAGATGTAGATATTGATTTAGATACACCATGGAATCCGTTAAAAATGACCCCCGAGGGAAGAGAAAAGTTCAA GCAATTATATGGCTATGATATTGTTGAGATGTGGATTCAAACATATGGATTACCAGAAGGACAAGATCAACAAGATCAGA AGGCATAA
Upstream 100 bases:
>100_bases TATGTCATACTGGAAATAGGAGTTGCTTCTATAGGAATTTTTCAGATTTAATTTAATGAAGAGTTTAAAATATATGAAGT GGTAATTAAATACGGTTAAA
Downstream 100 bases:
>100_bases ATTCTTTTGTGTTTTTTGTTAATTGTGTCTTGGAGTATATTAGAGTTAGTTAGAAACAATCCGGATAAACTTAAGGAATA TATAAAAAGAAGATTTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSTQQNINKEEWKKKIMEALTQVYDPEIPVDIVNLGLIYELKISDEGDVYVRMGLTAPGCPVVDDLIYTVEQVIKETVPA KSVDVDIDLDTPWNPLKMTPEGREKFKQLYGYDIVEMWIQTYGLPEGQDQQDQKA
Sequences:
>Translated_135_residues MSTQQNINKEEWKKKIMEALTQVYDPEIPVDIVNLGLIYELKISDEGDVYVRMGLTAPGCPVVDDLIYTVEQVIKETVPA KSVDVDIDLDTPWNPLKMTPEGREKFKQLYGYDIVEMWIQTYGLPEGQDQQDQKA >Mature_134_residues STQQNINKEEWKKKIMEALTQVYDPEIPVDIVNLGLIYELKISDEGDVYVRMGLTAPGCPVVDDLIYTVEQVIKETVPAK SVDVDIDLDTPWNPLKMTPEGREKFKQLYGYDIVEMWIQTYGLPEGQDQQDQKA
Specific function: May Be Part Of A Multicomponent Oxygenase Involved In Phenylacetyl-CoA Hydroxylation. [C]
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 15481; Mature: 15350
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQQNINKEEWKKKIMEALTQVYDPEIPVDIVNLGLIYELKISDEGDVYVRMGLTAPGC CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECEEEEEEECCCCCEEEEECCCCCCC PVVDDLIYTVEQVIKETVPAKSVDVDIDLDTPWNPLKMTPEGREKFKQLYGYDIVEMWIQ CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEECCCHHHHHHHHHCHHHHHHHHH TYGLPEGQDQQDQKA HCCCCCCCCCCCCCC >Mature Secondary Structure STQQNINKEEWKKKIMEALTQVYDPEIPVDIVNLGLIYELKISDEGDVYVRMGLTAPGC CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECEEEEEEECCCCCEEEEECCCCCCC PVVDDLIYTVEQVIKETVPAKSVDVDIDLDTPWNPLKMTPEGREKFKQLYGYDIVEMWIQ CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEECCCHHHHHHHHHCHHHHHHHHH TYGLPEGQDQQDQKA HCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]