| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921683
Identifier: 15921683
GI number: 15921683
Start: 1398504
End: 1399703
Strand: Reverse
Name: 15921683
Synonym: ST1394
Alternate gene names: NA
Gene position: 1399703-1398504 (Counterclockwise)
Preceding gene: 15921694
Following gene: 15921682
Centisome position: 51.94
GC content: 27.25
Gene sequence:
>1200_bases GTGGAATTTGTACCACTAACTAATAATTTTAACATTTTATCCTCTTTTATTCTCTTTATAAAAAGTTTCTCCGTTACATT ACTTCCATTCGTTAGGATTTTAATATCTTTAACAAGAGTTAAAACAGGAAGAGGTATAAAAAGCAGATCAAAATTATTAA GATTGAATTTTATCTCGTCTTCCTTTATTTTAATTACTTCAAAATCATATCCTCTCTTATTTATCCTACCGTTTAATAAA GGAAGTAGTGGTTTTAATTCTTCATCCTTTGAATACGCTAACTTTACTTTCACAACAAATTGTATATTTTTGGGAAATTT AATTTATCCCATCATGAATAGTCTAATATTAGGAGCTGGATATGCAGGAATTAATGCGTACCATATACTCAAAACTAATA TAATAGCGGAAAAGGAAGAATTTGTATTTTATACTGCATATTTAAGAAATTTGATTAACAATAAGCCATTTTCAAAGAAA CTCACTTTTGTTAAAAGAGAGAAAGTAATAGATATAGACCTTAAAAGCAAATGGGTAAAGACTGATAAATATGAATATAC CCCAGATAATCTTATTGTTGCATTAGGATGCAATAAAAACGACATATTAATTAAGATAAATGAAATAAAAAGAAAAGATA AACTACGTATTACATCTGAGGATCCTTCAAATGATTATCTAGCAATTCAATTAGCTTTTTATTTTAAAAATTTAGGAAAA GATGTAAAATATTATGGTGACTACTTGCAGTATCTTGGAGAAAAAGTTAGCTCTACAATAAAATATTATATGGAAAAATA TGGGATTAAAGAAACAGAAAAGCCAGAAGATGTAATTCCCTCATGTAAACCTCCTCATCCGTTTAGTTCATTTCTTAAAG TAAATGAGTATCTTCAATATGAAAATTCATTTGTTATAGGTGATCTTATTCAAGGATATCCAAAGTTAGGCGAACTTGCT ATGAGAACTGGAATTTATGTAGCAAATTATATTCTAGGCAAAAGCAATAGTCCATTCAGACCTATATTCATAACTATTAT TGATACTGGAAAAGAAGGAATACATATAAGATCAGATAAATTATGGAATGGAAAGATAGAAGTAGTGAAAGTTTCAAAGA TGAGACAGTTAATGAAAAGATTCATTGAAAGATATTATTTAATTAGAAATGGAAAAATGGGCTTTTTATATCATTTATGA
Upstream 100 bases:
>100_bases TAGGTCAAGATCCCCATCATTATAATTAATTACTGAGTTATAATCAGAAAAAGCAGGCATAATATTACTATTAATCAAGA TTTTTGCTAGATAAAACTCT
Downstream 100 bases:
>100_bases GTACCCAGGGACCTTGGGGGGTCAGGGGGATCATCATTCCTTATCATGAGGTCCCTGGGTACCCCATATTATTTTAAGTG GGTTAGGGGTATAAGTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MEFVPLTNNFNILSSFILFIKSFSVTLLPFVRILISLTRVKTGRGIKSRSKLLRLNFISSSFILITSKSYPLLFILPFNK GSSGFNSSSFEYANFTFTTNCIFLGNLIYPIMNSLILGAGYAGINAYHILKTNIIAEKEEFVFYTAYLRNLINNKPFSKK LTFVKREKVIDIDLKSKWVKTDKYEYTPDNLIVALGCNKNDILIKINEIKRKDKLRITSEDPSNDYLAIQLAFYFKNLGK DVKYYGDYLQYLGEKVSSTIKYYMEKYGIKETEKPEDVIPSCKPPHPFSSFLKVNEYLQYENSFVIGDLIQGYPKLGELA MRTGIYVANYILGKSNSPFRPIFITIIDTGKEGIHIRSDKLWNGKIEVVKVSKMRQLMKRFIERYYLIRNGKMGFLYHL
Sequences:
>Translated_399_residues MEFVPLTNNFNILSSFILFIKSFSVTLLPFVRILISLTRVKTGRGIKSRSKLLRLNFISSSFILITSKSYPLLFILPFNK GSSGFNSSSFEYANFTFTTNCIFLGNLIYPIMNSLILGAGYAGINAYHILKTNIIAEKEEFVFYTAYLRNLINNKPFSKK LTFVKREKVIDIDLKSKWVKTDKYEYTPDNLIVALGCNKNDILIKINEIKRKDKLRITSEDPSNDYLAIQLAFYFKNLGK DVKYYGDYLQYLGEKVSSTIKYYMEKYGIKETEKPEDVIPSCKPPHPFSSFLKVNEYLQYENSFVIGDLIQGYPKLGELA MRTGIYVANYILGKSNSPFRPIFITIIDTGKEGIHIRSDKLWNGKIEVVKVSKMRQLMKRFIERYYLIRNGKMGFLYHL >Mature_399_residues MEFVPLTNNFNILSSFILFIKSFSVTLLPFVRILISLTRVKTGRGIKSRSKLLRLNFISSSFILITSKSYPLLFILPFNK GSSGFNSSSFEYANFTFTTNCIFLGNLIYPIMNSLILGAGYAGINAYHILKTNIIAEKEEFVFYTAYLRNLINNKPFSKK LTFVKREKVIDIDLKSKWVKTDKYEYTPDNLIVALGCNKNDILIKINEIKRKDKLRITSEDPSNDYLAIQLAFYFKNLGK DVKYYGDYLQYLGEKVSSTIKYYMEKYGIKETEKPEDVIPSCKPPHPFSSFLKVNEYLQYENSFVIGDLIQGYPKLGELA MRTGIYVANYILGKSNSPFRPIFITIIDTGKEGIHIRSDKLWNGKIEVVKVSKMRQLMKRFIERYYLIRNGKMGFLYHL
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46185; Mature: 46185
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFVPLTNNFNILSSFILFIKSFSVTLLPFVRILISLTRVKTGRGIKSRSKLLRLNFISS CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECC SFILITSKSYPLLFILPFNKGSSGFNSSSFEYANFTFTTNCIFLGNLIYPIMNSLILGAG EEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHCCC YAGINAYHILKTNIIAEKEEFVFYTAYLRNLINNKPFSKKLTFVKREKVIDIDLKSKWVK CCCCCEEEEEEEHHEECCHHHEEHHHHHHHHHCCCCCCHHHHEEECCEEEEEECCCCEEE TDKYEYTPDNLIVALGCNKNDILIKINEIKRKDKLRITSEDPSNDYLAIQLAFYFKNLGK CCCCEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCEEEEEEEHHHHHHCC DVKYYGDYLQYLGEKVSSTIKYYMEKYGIKETEKPEDVIPSCKPPHPFSSFLKVNEYLQY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHH ENSFVIGDLIQGYPKLGELAMRTGIYVANYILGKSNSPFRPIFITIIDTGKEGIHIRSDK CCCEEEEHHHCCCCHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCC LWNGKIEVVKVSKMRQLMKRFIERYYLIRNGKMGFLYHL EECCEEEEEEHHHHHHHHHHHHHHHEEEECCCEEEEEEC >Mature Secondary Structure MEFVPLTNNFNILSSFILFIKSFSVTLLPFVRILISLTRVKTGRGIKSRSKLLRLNFISS CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECC SFILITSKSYPLLFILPFNKGSSGFNSSSFEYANFTFTTNCIFLGNLIYPIMNSLILGAG EEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHCCC YAGINAYHILKTNIIAEKEEFVFYTAYLRNLINNKPFSKKLTFVKREKVIDIDLKSKWVK CCCCCEEEEEEEHHEECCHHHEEHHHHHHHHHCCCCCCHHHHEEECCEEEEEECCCCEEE TDKYEYTPDNLIVALGCNKNDILIKINEIKRKDKLRITSEDPSNDYLAIQLAFYFKNLGK CCCCEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCEEEEEEEHHHHHHCC DVKYYGDYLQYLGEKVSSTIKYYMEKYGIKETEKPEDVIPSCKPPHPFSSFLKVNEYLQY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHH ENSFVIGDLIQGYPKLGELAMRTGIYVANYILGKSNSPFRPIFITIIDTGKEGIHIRSDK CCCEEEEHHHCCCCHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEEECCCCCEEEECCC LWNGKIEVVKVSKMRQLMKRFIERYYLIRNGKMGFLYHL EECCEEEEEEHHHHHHHHHHHHHHHEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA