Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

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The map label for this gene is 15921694

Identifier: 15921694

GI number: 15921694

Start: 1411928

End: 1412830

Strand: Reverse

Name: 15921694

Synonym: ST1405

Alternate gene names: NA

Gene position: 1412830-1411928 (Counterclockwise)

Preceding gene: 15921695

Following gene: 15921683

Centisome position: 52.43

GC content: 31.67

Gene sequence:

>903_bases
ATGCAGAATCTATCATCTACTCAGAGGGAAATACTTCTAGCATTAGTAGACCTATATAACAGGTATAAAAGAATGATAAA
AAGCAAAGAAGTTGCTGACGTTATTGGAAAGGATGAGGGAACAGTTAGAAACATAATTCTTAGCCTTAAAGTCTTAGGCT
TAATAGAATCTAAACCGGGTCCTAATGGTGGTTATGTTCCTACCTTAAAAGCCTACGAGTCTATTAAAAATCCAATTATT
ACACCGGTATTTGATCAAATAAGTTTATATAAGGATGGGCTAGAAACAGATATAAAAATTAGTAATATTGAACTTCTTGA
TATTACAAATCCTTCTGGTAATAAAGTACTTTTAAGAGTAAATGGTGATTTGAGAAAATTAAAAGTAGGAGATTCTATAA
AGATTGGTCCTATTCCCTACACTAGACTCGTAATAGAAGGAGTTGTTATACATATTGACGATACAAGAAAAGAGTTAATC
GCAGATGTAACCAGAATGATTAGTATACCCAAAGTTCAGATAAAAAGTTTGATCTCAAAGAAATTAGTAGCCCTAAAACC
TGATATGACTTTAAAAGAAGCGTCCCAAATATTCTACAAGGAAGGAATCAGAGGAGCACCGGTACTTGATAATGAAGGAA
AAACATTAGGAATCTTGACTACTGCTGATATAATTAAGGCTTTCTTTGAAGGGAAATATGATGCAAAGGTGAGTGAATAT
ATGAAAAGTAATGTTATTAGTATAAGAGATGAAGATGATATTTTAACTGCAATAAAGAAAATGTTAATATATAATGTAGG
TAGACTGCTAGTATATAATCAAGATCAAAAAGTTATAGGAATAGTTACAAGAACAGATATACTTAAGACAATAGCGGGTT
TAGAGGAGTTGATAACTCCTTGA

Upstream 100 bases:

>100_bases
TTTGATAGCTTCAGAAGTATTTAACATTAATCAAAAAATTCTAAAAAGAATATTTTCTTAGGGAATTATTTTTAAACCTA
AACTTGTATTATAATTATTG

Downstream 100 bases:

>100_bases
GAAAAGAGAAAATTGGAATTCTTCTACAAGATAATACAATTATTTATATTGAAAATGTATCTAAAAATGAAAATAGATTT
GAAATTAACACAGAAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPGPNGGYVPTLKAYESIKNPII
TPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRVNGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELI
ADVTRMISIPKVQIKSLISKKLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY
MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP

Sequences:

>Translated_300_residues
MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPGPNGGYVPTLKAYESIKNPII
TPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRVNGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELI
ADVTRMISIPKVQIKSLISKKLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY
MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP
>Mature_300_residues
MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPGPNGGYVPTLKAYESIKNPII
TPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRVNGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELI
ADVTRMISIPKVQIKSLISKKLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY
MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP

Specific function: Unknown

COG id: COG2524

COG function: function code K; Predicted transcriptional regulator, contains C-terminal CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001807
- InterPro:   IPR000644
- InterPro:   IPR016436
- InterPro:   IPR005104
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00571 CBS; PF03444 DUF293 [H]

EC number: NA

Molecular weight: Translated: 33436; Mature: 33436

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
PNGGYVPTLKAYESIKNPIITPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRV
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCEEEEEE
NGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELIADVTRMISIPKVQIKSLISK
CCCEEEEECCCCEEECCCCHHHHEEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH
KLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY
HHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCHHHHHH
MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP
HHCCCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
PNGGYVPTLKAYESIKNPIITPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRV
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCEEEEEE
NGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELIADVTRMISIPKVQIKSLISK
CCCEEEEECCCCEEECCCCHHHHEEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH
KLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY
HHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCHHHHHH
MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP
HHCCCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]