| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921694
Identifier: 15921694
GI number: 15921694
Start: 1411928
End: 1412830
Strand: Reverse
Name: 15921694
Synonym: ST1405
Alternate gene names: NA
Gene position: 1412830-1411928 (Counterclockwise)
Preceding gene: 15921695
Following gene: 15921683
Centisome position: 52.43
GC content: 31.67
Gene sequence:
>903_bases ATGCAGAATCTATCATCTACTCAGAGGGAAATACTTCTAGCATTAGTAGACCTATATAACAGGTATAAAAGAATGATAAA AAGCAAAGAAGTTGCTGACGTTATTGGAAAGGATGAGGGAACAGTTAGAAACATAATTCTTAGCCTTAAAGTCTTAGGCT TAATAGAATCTAAACCGGGTCCTAATGGTGGTTATGTTCCTACCTTAAAAGCCTACGAGTCTATTAAAAATCCAATTATT ACACCGGTATTTGATCAAATAAGTTTATATAAGGATGGGCTAGAAACAGATATAAAAATTAGTAATATTGAACTTCTTGA TATTACAAATCCTTCTGGTAATAAAGTACTTTTAAGAGTAAATGGTGATTTGAGAAAATTAAAAGTAGGAGATTCTATAA AGATTGGTCCTATTCCCTACACTAGACTCGTAATAGAAGGAGTTGTTATACATATTGACGATACAAGAAAAGAGTTAATC GCAGATGTAACCAGAATGATTAGTATACCCAAAGTTCAGATAAAAAGTTTGATCTCAAAGAAATTAGTAGCCCTAAAACC TGATATGACTTTAAAAGAAGCGTCCCAAATATTCTACAAGGAAGGAATCAGAGGAGCACCGGTACTTGATAATGAAGGAA AAACATTAGGAATCTTGACTACTGCTGATATAATTAAGGCTTTCTTTGAAGGGAAATATGATGCAAAGGTGAGTGAATAT ATGAAAAGTAATGTTATTAGTATAAGAGATGAAGATGATATTTTAACTGCAATAAAGAAAATGTTAATATATAATGTAGG TAGACTGCTAGTATATAATCAAGATCAAAAAGTTATAGGAATAGTTACAAGAACAGATATACTTAAGACAATAGCGGGTT TAGAGGAGTTGATAACTCCTTGA
Upstream 100 bases:
>100_bases TTTGATAGCTTCAGAAGTATTTAACATTAATCAAAAAATTCTAAAAAGAATATTTTCTTAGGGAATTATTTTTAAACCTA AACTTGTATTATAATTATTG
Downstream 100 bases:
>100_bases GAAAAGAGAAAATTGGAATTCTTCTACAAGATAATACAATTATTTATATTGAAAATGTATCTAAAAATGAAAATAGATTT GAAATTAACACAGAAGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPGPNGGYVPTLKAYESIKNPII TPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRVNGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELI ADVTRMISIPKVQIKSLISKKLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP
Sequences:
>Translated_300_residues MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPGPNGGYVPTLKAYESIKNPII TPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRVNGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELI ADVTRMISIPKVQIKSLISKKLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP >Mature_300_residues MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPGPNGGYVPTLKAYESIKNPII TPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRVNGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELI ADVTRMISIPKVQIKSLISKKLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP
Specific function: Unknown
COG id: COG2524
COG function: function code K; Predicted transcriptional regulator, contains C-terminal CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001807 - InterPro: IPR000644 - InterPro: IPR016436 - InterPro: IPR005104 - InterPro: IPR011991 [H]
Pfam domain/function: PF00571 CBS; PF03444 DUF293 [H]
EC number: NA
Molecular weight: Translated: 33436; Mature: 33436
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC PNGGYVPTLKAYESIKNPIITPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRV CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCEEEEEE NGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELIADVTRMISIPKVQIKSLISK CCCEEEEECCCCEEECCCCHHHHEEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH KLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY HHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCHHHHHH MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP HHCCCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQNLSSTQREILLALVDLYNRYKRMIKSKEVADVIGKDEGTVRNIILSLKVLGLIESKPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC PNGGYVPTLKAYESIKNPIITPVFDQISLYKDGLETDIKISNIELLDITNPSGNKVLLRV CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCEEEEEE NGDLRKLKVGDSIKIGPIPYTRLVIEGVVIHIDDTRKELIADVTRMISIPKVQIKSLISK CCCEEEEECCCCEEECCCCHHHHEEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH KLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEY HHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCHHHHHH MKSNVISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGLEELITP HHCCCEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]