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The map label for this gene is rplX [H]

Identifier: 15921657

GI number: 15921657

Start: 1378910

End: 1379179

Strand: Reverse

Name: rplX [H]

Synonym: STS167

Alternate gene names: 15921657

Gene position: 1379179-1378910 (Counterclockwise)

Preceding gene: 15921658

Following gene: 15921656

Centisome position: 51.18

GC content: 27.04

Gene sequence:

>270_bases
GTGATTGAGATGAGTGAGATAAAAACTTACGTCATAAGAGCAATAGTAACATTTAATGCTTCACATTATCCAATGAAACA
AAAAGTAGTTAAGTATGTAAGAGCATTAAATGAAAAACAAGCATTAGAGTACTTGTATTCATATTTAGGAAGCAAGAACA
AAGTAAAGAGATATAATATAAAGATAGAGGAAATAAAAGAGATACCAGTAGAAGAAGCAAAAGATAAAACAGTAAGAGAT
TTAGCAAAGTTAAATAAAATAATAATGTGA

Upstream 100 bases:

>100_bases
AGTGCTTTTATCCATAGTGGTTTAATAGCAAATAGGAATGGAGTTCTAGTAGGTTCAGCAACAACAGGACCAGAGATTTT
AAGAATCCAAAGAGCTTTTA

Downstream 100 bases:

>100_bases
TATTTATGAGTAATGAAGAAAATCAGCAAAAAGTAGTTGTCTCTTTAGAGGATTTATTAGCACAAGCAGATGCATTAAAA
AAGTATATTGATTATTTACA

Product: 50S ribosomal protein LX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MIEMSEIKTYVIRAIVTFNASHYPMKQKVVKYVRALNEKQALEYLYSYLGSKNKVKRYNIKIEEIKEIPVEEAKDKTVRD
LAKLNKIIM

Sequences:

>Translated_89_residues
MIEMSEIKTYVIRAIVTFNASHYPMKQKVVKYVRALNEKQALEYLYSYLGSKNKVKRYNIKIEEIKEIPVEEAKDKTVRD
LAKLNKIIM
>Mature_89_residues
MIEMSEIKTYVIRAIVTFNASHYPMKQKVVKYVRALNEKQALEYLYSYLGSKNKVKRYNIKIEEIKEIPVEEAKDKTVRD
LAKLNKIIM

Specific function: Unknown

COG id: COG2157

COG function: function code J; Ribosomal protein L20A (L18A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein LX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021138
- InterPro:   IPR002768
- ProDom:   PD010302 [H]

Pfam domain/function: PF01775 Ribosomal_L18ae [H]

EC number: NA

Molecular weight: Translated: 10541; Mature: 10541

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMSEIKTYVIRAIVTFNASHYPMKQKVVKYVRALNEKQALEYLYSYLGSKNKVKRYNI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC
KIEEIKEIPVEEAKDKTVRDLAKLNKIIM
HHHHHHHCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEMSEIKTYVIRAIVTFNASHYPMKQKVVKYVRALNEKQALEYLYSYLGSKNKVKRYNI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC
KIEEIKEIPVEEAKDKTVRDLAKLNKIIM
HHHHHHHCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479 [H]