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The map label for this gene is pfdA [H]

Identifier: 15921656

GI number: 15921656

Start: 1378449

End: 1378913

Strand: Reverse

Name: pfdA [H]

Synonym: ST1371

Alternate gene names: 15921656

Gene position: 1378913-1378449 (Counterclockwise)

Preceding gene: 15921657

Following gene: 60623873

Centisome position: 51.17

GC content: 29.46

Gene sequence:

>465_bases
GTGATATTTATGAGTAATGAAGAAAATCAGCAAAAAGTAGTTGTCTCTTTAGAGGATTTATTAGCACAAGCAGATGCATT
AAAAAAGTATATTGATTATTTACAGAAAACTTATGCTGAACTACAAGATAATATAATGTCAATAGACTCCTCATTACAAG
CATTAAAAGAATTACAAAATAGTCAAGAGCTCTTAATGGTAGGGGACAAAAGAGGAAACGTAATATTCAAGGTTCAAGGT
ATAGATAAGGCAAAAGTTTTAGTTCACTTAGGTCTAGAATATTATGCAGAAGTAGACCCAGATTTTGCAACTAAAGTATT
AAATGATAAAAAAAGTGAATTATCAAACGTTTTAAGTAACGTAGAAAAAGAATTAGCTAAATCTTTAGAAGCCTATAAAG
AAATAGCTGACATACTTAATCAAGCACAACAACAATTGCAAGCTCAACAAAATAAAGGTGGATAA

Upstream 100 bases:

>100_bases
AGAGATATAATATAAAGATAGAGGAAATAAAAGAGATACCAGTAGAAGAAGCAAAAGATAAAACAGTAAGAGATTTAGCA
AAGTTAAATAAAATAATAAT

Downstream 100 bases:

>100_bases
TTTGTTTTGATAAATTAAAAAAAGCATTTAATAATTTATTAGATAAAATAAAAGGAGAAAGCAAACCTGAAGAAGAAAAG
AAAGAAGAAACAAAACAAAC

Product: prefoldin subunit alpha

Products: NA

Alternate protein names: GimC subunit alpha [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIFMSNEENQQKVVVSLEDLLAQADALKKYIDYLQKTYAELQDNIMSIDSSLQALKELQNSQELLMVGDKRGNVIFKVQG
IDKAKVLVHLGLEYYAEVDPDFATKVLNDKKSELSNVLSNVEKELAKSLEAYKEIADILNQAQQQLQAQQNKGG

Sequences:

>Translated_154_residues
MIFMSNEENQQKVVVSLEDLLAQADALKKYIDYLQKTYAELQDNIMSIDSSLQALKELQNSQELLMVGDKRGNVIFKVQG
IDKAKVLVHLGLEYYAEVDPDFATKVLNDKKSELSNVLSNVEKELAKSLEAYKEIADILNQAQQQLQAQQNKGG
>Mature_154_residues
MIFMSNEENQQKVVVSLEDLLAQADALKKYIDYLQKTYAELQDNIMSIDSSLQALKELQNSQELLMVGDKRGNVIFKVQG
IDKAKVLVHLGLEYYAEVDPDFATKVLNDKKSELSNVLSNVEKELAKSLEAYKEIADILNQAQQQLQAQQNKGG

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding [H]

COG id: COG1730

COG function: function code O; Predicted prefoldin, molecular chaperone implicated in de novo protein folding

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit alpha family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011599
- InterPro:   IPR009053
- InterPro:   IPR004127 [H]

Pfam domain/function: PF02996 Prefoldin [H]

EC number: NA

Molecular weight: Translated: 17351; Mature: 17351

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFMSNEENQQKVVVSLEDLLAQADALKKYIDYLQKTYAELQDNIMSIDSSLQALKELQN
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SQELLMVGDKRGNVIFKVQGIDKAKVLVHLGLEYYAEVDPDFATKVLNDKKSELSNVLSN
CCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHH
VEKELAKSLEAYKEIADILNQAQQQLQAQQNKGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIFMSNEENQQKVVVSLEDLLAQADALKKYIDYLQKTYAELQDNIMSIDSSLQALKELQN
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SQELLMVGDKRGNVIFKVQGIDKAKVLVHLGLEYYAEVDPDFATKVLNDKKSELSNVLSN
CCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHH
VEKELAKSLEAYKEIADILNQAQQQLQAQQNKGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479 [H]