| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921183
Identifier: 15921183
GI number: 15921183
Start: 921856
End: 922776
Strand: Direct
Name: 15921183
Synonym: ST0947
Alternate gene names: NA
Gene position: 921856-922776 (Clockwise)
Preceding gene: 15921182
Following gene: 15921184
Centisome position: 34.21
GC content: 29.53
Gene sequence:
>921_bases ATGAAATCTTATGCTATTTTAAACCAGAATAATCTATTTTTATCCTTAGAAGAACTTAAAGCAATAATAGATTCTGATGA AGTAGAATATTATCATGGTGTAGCCTTATTTAATAAAGAACCTAATAATGTTGCCAAAAGATCAAGTTTAATTAAATATA GTGGGAGAGTTATTGCTATATCCCATGATGTAAATGAAATAGTAAAAAATATAAAGGGTGAATGTTTTTCCGTTGATCCT ACTGTTATAACTAAGGAATATAAAAGTGAGTTTTTATCTATATATGATAGAATTATAAATAATATAAAAGTATCAAAGAA ATGTAAAAAAATGGATTTGATCTTTACAGAAGGATTAATTATAGCTGGTCTTAGGGTTGAGGAAAAGGATAATGAAAGCT TATTTAAGCATTCTAAAAAGCCTTATTCTCAATCTGGTACTTTATCTCCAGACATAGGTAGACTAATGGTTAATCTTTCT AAAAGTAGAAAAACGATCCTAGACCCTTTTGTAGGAACCGGGACAATATTAATAGAGGCTAAATGGTTAGGACTTAATTG TATTGGTCTTGATGTTGATAGTAAAATGATAGAAAAGAGCTTAGTTAATTTAAGGTACTTTGGTTATGAATGTGATATCT TAAGAGGAGATGCAACATCTTTACCTTTTAATAATATTGAAGCTATTGTTACTGATCCTCCCTATGGTAGATCTGTAAGT GTAAGGGAGGGGATAAACAATCTGTATGAGGGCTTCTTCTATTCGGCAAGCAATATAACGCGTACTTTAGTTTTTACTAC GGACTCTAAATTAGATTGGAGAGATAAGTTAAAGGAAGTTGGTTTTAATGATATTTCAATCCATTTTATTTATGAGCATA AAAGTTTAAGCAGAGCAATATACGTGGTAAGAAAAAAATGA
Upstream 100 bases:
>100_bases TTAATAGTGGAGTTAAGGAGATTGTAACAACTAATACTATACCACAAGATCCATCAAAAGTAACAGTAGTTGATGTATCA CCAGCTATAGCGAGAAAAAT
Downstream 100 bases:
>100_bases TTACAGTATATTTTATAGGTACTGGTGGAGGAGCTCCTAATAAAAGGGGCTTACCAGCAATTATGGTTAGAAGGGAAGGT TTTGATGCTCTATTTGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAISHDVNEIVKNIKGECFSVDP TVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLIIAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLS KSRKTILDPFVGTGTILIEAKWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAIYVVRKK
Sequences:
>Translated_306_residues MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAISHDVNEIVKNIKGECFSVDP TVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLIIAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLS KSRKTILDPFVGTGTILIEAKWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAIYVVRKK >Mature_306_residues MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAISHDVNEIVKNIKGECFSVDP TVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLIIAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLS KSRKTILDPFVGTGTILIEAKWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAIYVVRKK
Specific function: Unknown
COG id: COG1041
COG function: function code L; Predicted DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 THUMP domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005885 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR000241 - InterPro: IPR004114 [H]
Pfam domain/function: PF02926 THUMP; PF01170 UPF0020 [H]
EC number: NA
Molecular weight: Translated: 34823; Mature: 34823
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAI CCCEEEEECCCEEEEHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHEEECCEEEEE SHDVNEIVKNIKGECFSVDPTVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLI ECCHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCEE IAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLSKSRKTILDPFVGTGTILIEA EEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCHHHHCCCCCCCEEEEEE KWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS EEECEEEEEECCCHHHHHHHHHHEEEECEEEEEEECCCCCCCCCCCEEEEECCCCCCEEE VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAI HHHHHHHHHHHHEEECCCCEEEEEEEECCCCCHHHHHHHCCCCEEEEEEEEECCCCCEEE YVVRKK EEEECC >Mature Secondary Structure MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAI CCCEEEEECCCEEEEHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHEEECCEEEEE SHDVNEIVKNIKGECFSVDPTVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLI ECCHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCEE IAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLSKSRKTILDPFVGTGTILIEA EEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCHHHHCCCCCCCEEEEEE KWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS EEECEEEEEECCCHHHHHHHHHHEEEECEEEEEEECCCCCCCCCCCEEEEECCCCCCEEE VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAI HHHHHHHHHHHHEEECCCCEEEEEEEECCCCCHHHHHHHCCCCEEEEEEEEECCCCCEEE YVVRKK EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]