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The map label for this gene is yliC [C]

Identifier: 15920933

GI number: 15920933

Start: 687560

End: 688621

Strand: Reverse

Name: yliC [C]

Synonym: ST0704

Alternate gene names: 15920933

Gene position: 688621-687560 (Counterclockwise)

Preceding gene: 15920936

Following gene: 15920932

Centisome position: 25.55

GC content: 32.77

Gene sequence:

>1062_bases
GTGACTATCCTTATGTCACTTAAAGAAGGGAAAAGGTCAACATTTTCTTCGGTTTCTACTAGAATTCCAGTAAAATATTT
AATAAAAAGGATTATAGAGAGGATTATTCTTATCATTGTTATAATCTCATTCTTATTTTTCCTATTTAGAGTATTACCTC
TCGCCTTTCATGTAAATCCAGCTAGCTTTTACGTACCTCCAACATATAAGGGTTTGTCTAGGAGCACATTAATTGAGGCT
ATTGATAAGCAATGGGGGCTTAATCAGCCATTTTATATTCAGTATATTGATTATTTGAAGAACATGTTAACTTTTAACTT
CGGCTATTCTTTAACCTATGATGAAAGTATAACAACACTTGTTATGCAAGCTATCCCAGTTGATTTATTAATATTAATTC
CTAGTTTAATTTTGAGTACTATTTTAGCTATAATATTAGGAATTTTATCGGCTACTAGGCAAGGGAAACTTGTTGACAGT
ATTAACTCTACAATAGCTATATTTACGTATTTTATTCCAGCCTTCTGGATATTTGCAATAGTATTATATTATTTTGGATA
CCAGTTAGGTTGGGTTCCAACTAATATAGCTGATGCTTTAACTAAAAATGGGGTTCCATTACATGGTTTTGCTTATGTTG
CTGGTTTACTCAAGTTTATTGCTCTGCCAGTTATACTTTTGACAATTTTGTCTTATGGAGTAAGGATGATACTAACTAGA
GCATATGGAATAGACGCATCAAATAGTCATTTTGCCACTTATCTTAGAGCTAGAGGGATCCCAAATAGAACTATTTTATA
TAAACATATAGCTAGGAATGCAATGATTCCTGCTATCACTAGGACTGGAATAGATTTTGCCTTTGTTTTAGCAGGCGCTG
TATTCGTGGAAGAAATTTTCAACTATTATGGAATGGGAGTGCTATTAGTTAAATCCGCTGAGACCTTTGACGTTCCTGTA
CTTGAAGCCGTATTCTATATAATTAATCTATATGCAATAATCGTACTTTTGGTTTTAGATTTAGTTTATCCGTTCATAGA
CCCTAGGGTGAAGTATGAATGA

Upstream 100 bases:

>100_bases
TTTCACTTTTTATATTCTGAATGATAAATGATCTCAAATAAATTGAGAAAACTTTTATATAGGAGATATTCGAGAGTAAA
ATGATAAAATTACATTATTG

Downstream 100 bases:

>100_bases
ATAAATTTGTAAAAGATCTTTTACATAGAAAATCCTTTATAATCTCAGTAATCATTATAGCAATATTCGTTTTTATAGCT
GCAGCAGCACCTATTCTTAC

Product: oligopeptide transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTILMSLKEGKRSTFSSVSTRIPVKYLIKRIIERIILIIVIISFLFFLFRVLPLAFHVNPASFYVPPTYKGLSRSTLIEA
IDKQWGLNQPFYIQYIDYLKNMLTFNFGYSLTYDESITTLVMQAIPVDLLILIPSLILSTILAIILGILSATRQGKLVDS
INSTIAIFTYFIPAFWIFAIVLYYFGYQLGWVPTNIADALTKNGVPLHGFAYVAGLLKFIALPVILLTILSYGVRMILTR
AYGIDASNSHFATYLRARGIPNRTILYKHIARNAMIPAITRTGIDFAFVLAGAVFVEEIFNYYGMGVLLVKSAETFDVPV
LEAVFYIINLYAIIVLLVLDLVYPFIDPRVKYE

Sequences:

>Translated_353_residues
MTILMSLKEGKRSTFSSVSTRIPVKYLIKRIIERIILIIVIISFLFFLFRVLPLAFHVNPASFYVPPTYKGLSRSTLIEA
IDKQWGLNQPFYIQYIDYLKNMLTFNFGYSLTYDESITTLVMQAIPVDLLILIPSLILSTILAIILGILSATRQGKLVDS
INSTIAIFTYFIPAFWIFAIVLYYFGYQLGWVPTNIADALTKNGVPLHGFAYVAGLLKFIALPVILLTILSYGVRMILTR
AYGIDASNSHFATYLRARGIPNRTILYKHIARNAMIPAITRTGIDFAFVLAGAVFVEEIFNYYGMGVLLVKSAETFDVPV
LEAVFYIINLYAIIVLLVLDLVYPFIDPRVKYE
>Mature_352_residues
TILMSLKEGKRSTFSSVSTRIPVKYLIKRIIERIILIIVIISFLFFLFRVLPLAFHVNPASFYVPPTYKGLSRSTLIEAI
DKQWGLNQPFYIQYIDYLKNMLTFNFGYSLTYDESITTLVMQAIPVDLLILIPSLILSTILAIILGILSATRQGKLVDSI
NSTIAIFTYFIPAFWIFAIVLYYFGYQLGWVPTNIADALTKNGVPLHGFAYVAGLLKFIALPVILLTILSYGVRMILTRA
YGIDASNSHFATYLRARGIPNRTILYKHIARNAMIPAITRTGIDFAFVLAGAVFVEEIFNYYGMGVLLVKSAETFDVPVL
EAVFYIINLYAIIVLLVLDLVYPFIDPRVKYE

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=331, Percent_Identity=30.8157099697885, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1787497, Length=330, Percent_Identity=25.7575757575758, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788504, Length=288, Percent_Identity=28.8194444444444, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1789888, Length=335, Percent_Identity=24.4776119402985, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1789965, Length=282, Percent_Identity=25.177304964539, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787761, Length=296, Percent_Identity=28.3783783783784, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=23.0769230769231, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39928; Mature: 39797

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILMSLKEGKRSTFSSVSTRIPVKYLIKRIIERIILIIVIISFLFFLFRVLPLAFHVNP
CEEEEECHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASFYVPPTYKGLSRSTLIEAIDKQWGLNQPFYIQYIDYLKNMLTFNFGYSLTYDESITTL
CCEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHH
VMQAIPVDLLILIPSLILSTILAIILGILSATRQGKLVDSINSTIAIFTYFIPAFWIFAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLYYFGYQLGWVPTNIADALTKNGVPLHGFAYVAGLLKFIALPVILLTILSYGVRMILTR
HHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGIDASNSHFATYLRARGIPNRTILYKHIARNAMIPAITRTGIDFAFVLAGAVFVEEIF
HHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHH
NYYGMGVLLVKSAETFDVPVLEAVFYIINLYAIIVLLVLDLVYPFIDPRVKYE
HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TILMSLKEGKRSTFSSVSTRIPVKYLIKRIIERIILIIVIISFLFFLFRVLPLAFHVNP
EEEEECHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASFYVPPTYKGLSRSTLIEAIDKQWGLNQPFYIQYIDYLKNMLTFNFGYSLTYDESITTL
CCEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHH
VMQAIPVDLLILIPSLILSTILAIILGILSATRQGKLVDSINSTIAIFTYFIPAFWIFAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLYYFGYQLGWVPTNIADALTKNGVPLHGFAYVAGLLKFIALPVILLTILSYGVRMILTR
HHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYGIDASNSHFATYLRARGIPNRTILYKHIARNAMIPAITRTGIDFAFVLAGAVFVEEIF
HHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHH
NYYGMGVLLVKSAETFDVPVLEAVFYIINLYAIIVLLVLDLVYPFIDPRVKYE
HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA