| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yleA [C]
Identifier: 15920732
GI number: 15920732
Start: 511999
End: 513255
Strand: Reverse
Name: yleA [C]
Synonym: ST0515
Alternate gene names: 15920732
Gene position: 513255-511999 (Counterclockwise)
Preceding gene: 15920740
Following gene: 15920731
Centisome position: 19.05
GC content: 31.82
Gene sequence:
>1257_bases GTGAAGGTTTATATTGAAACATATGGTTGTGCACTTAATAAAGGAGATTCATACATAATGATGACTTTATTAAAAGATAG AGGGCATGATATAGTTGACAGTTATAATCAGGCTGATGTAATAGTTCTGAATACTTGCGCTGTTAGATTAGAAACAGAAG AAAGAATGAAGCAAAGGATAAAGGAATTGAAAAAAATTGGAAAGAAACTAATAATAGCTGGGTGTTTGGTTAGCTCTCAA CCAGCATTAGTAATGAGCCTAGCACCTGAAAGTAGTATTGTTGGAGCACAAAGTATAGATAAAATAGTTGAAGCGGTTGA AAGTAACAAGAGAGGGATATTTCTTGAAGAAAGTAAAGAATTAGTCACGCCTAGAATATTTGAAGGTAAAATTTCAATAA TACCAATTGCTGATGGTTGTGCTGGAGATTGTAATTTTTGTATAACTAAATTAGCTAGAAAGAAACTAAGAAGTTATCCT CCAAGAAACATAGTAAATGCCGTTAAAGAGGCTGTTCAGAAAGGTGCTGTAGAAATAGAACTTACAGCTCAAGATACGGC CGCTTACGGATTGGATATCAACTACAACTTAGTAGAATTACTGAAAGAAATATTAGAAATAGAAGGGAATTATATGATAA GAATAGGTATGATGACCCCAGAATTAGCTTTTAAACAAATTGATGAGATATTAGAAATAATTAAAGATAAGAGAGTATAT AAGTTCTTACACTTACCCGTACAAAGCGGAGATGATAGAGTTCTGAAGCTAATGAATAGAAAATATACCGTTGATGAATA TAGAGAGTTAGTTAAGGAAATAAGAGACAAAATACCAATAGTTAACATAACTACGGACATTATAATTGGTCATCCAGGAG AAGATGATGAAGCTTTTCAGAATACAATAAATCTTATTAAAGAAATAAAGTTTGAAAGAATACACCTAGCAATGTATTCA ATACGTCCTAATACGAGAAGCGCATCAATGCCACAAGTGCCAGATTCTATAAAGAAGGAGCGAATGAAAATTGCTAATGA AGTGTATGAAGAGGTAGCATATTCTGTTCACTCTGAATATTTAGGTTCAAATGCTTTAGTTTTAACTACTGAATTAGGTA GAAAAGGCTCAATAATAGGAAGAACTATTAATTATATCCCAGTCGTAATTAAGGATTATGATAAATTAGGTGAGTGGATT AACGTAAAAATTACTGAGGCATCATTTTTTGATTTAAGAGGAAAATTTATTCAATAA
Upstream 100 bases:
>100_bases GGTAGTTTTGAATACAATCTGTCCAATAGTTTAATATACTCTTCTTCTGTAGACACAAGTAATCTTAAGAGGTTGAAGTA TAAATTACTTATGATTAGTT
Downstream 100 bases:
>100_bases CGAGACAAATTCAAATGCATAAAAATTTAAAATAGTTTAAACAAAGTGATTAATATGGATGCATATATTGTTTCCGCTGT AAGAACTCCTATAGGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKVYIETYGCALNKGDSYIMMTLLKDRGHDIVDSYNQADVIVLNTCAVRLETEERMKQRIKELKKIGKKLIIAGCLVSSQ PALVMSLAPESSIVGAQSIDKIVEAVESNKRGIFLEESKELVTPRIFEGKISIIPIADGCAGDCNFCITKLARKKLRSYP PRNIVNAVKEAVQKGAVEIELTAQDTAAYGLDINYNLVELLKEILEIEGNYMIRIGMMTPELAFKQIDEILEIIKDKRVY KFLHLPVQSGDDRVLKLMNRKYTVDEYRELVKEIRDKIPIVNITTDIIIGHPGEDDEAFQNTINLIKEIKFERIHLAMYS IRPNTRSASMPQVPDSIKKERMKIANEVYEEVAYSVHSEYLGSNALVLTTELGRKGSIIGRTINYIPVVIKDYDKLGEWI NVKITEASFFDLRGKFIQ
Sequences:
>Translated_418_residues MKVYIETYGCALNKGDSYIMMTLLKDRGHDIVDSYNQADVIVLNTCAVRLETEERMKQRIKELKKIGKKLIIAGCLVSSQ PALVMSLAPESSIVGAQSIDKIVEAVESNKRGIFLEESKELVTPRIFEGKISIIPIADGCAGDCNFCITKLARKKLRSYP PRNIVNAVKEAVQKGAVEIELTAQDTAAYGLDINYNLVELLKEILEIEGNYMIRIGMMTPELAFKQIDEILEIIKDKRVY KFLHLPVQSGDDRVLKLMNRKYTVDEYRELVKEIRDKIPIVNITTDIIIGHPGEDDEAFQNTINLIKEIKFERIHLAMYS IRPNTRSASMPQVPDSIKKERMKIANEVYEEVAYSVHSEYLGSNALVLTTELGRKGSIIGRTINYIPVVIKDYDKLGEWI NVKITEASFFDLRGKFIQ >Mature_418_residues MKVYIETYGCALNKGDSYIMMTLLKDRGHDIVDSYNQADVIVLNTCAVRLETEERMKQRIKELKKIGKKLIIAGCLVSSQ PALVMSLAPESSIVGAQSIDKIVEAVESNKRGIFLEESKELVTPRIFEGKISIIPIADGCAGDCNFCITKLARKKLRSYP PRNIVNAVKEAVQKGAVEIELTAQDTAAYGLDINYNLVELLKEILEIEGNYMIRIGMMTPELAFKQIDEILEIIKDKRVY KFLHLPVQSGDDRVLKLMNRKYTVDEYRELVKEIRDKIPIVNITTDIIIGHPGEDDEAFQNTINLIKEIKFERIHLAMYS IRPNTRSASMPQVPDSIKKERMKIANEVYEEVAYSVHSEYLGSNALVLTTELGRKGSIIGRTINYIPVVIKDYDKLGEWI NVKITEASFFDLRGKFIQ
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TRAM domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=385, Percent_Identity=37.6623376623377, Blast_Score=258, Evalue=5e-69, Organism=Homo sapiens, GI28872782, Length=478, Percent_Identity=26.5690376569038, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI28872784, Length=478, Percent_Identity=26.5690376569038, Blast_Score=170, Evalue=3e-42, Organism=Escherichia coli, GI1786882, Length=443, Percent_Identity=30.9255079006772, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI1787057, Length=440, Percent_Identity=26.5909090909091, Blast_Score=167, Evalue=8e-43, Organism=Caenorhabditis elegans, GI71996771, Length=356, Percent_Identity=31.4606741573034, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17553146, Length=459, Percent_Identity=26.1437908496732, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI19922432, Length=439, Percent_Identity=33.4851936218679, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI21356207, Length=476, Percent_Identity=28.5714285714286, Blast_Score=168, Evalue=7e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006466 - InterPro: IPR007197 - InterPro: IPR002792 [H]
Pfam domain/function: PF04055 Radical_SAM; PF01938 TRAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 47400; Mature: 47400
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS50926 TRAM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVYIETYGCALNKGDSYIMMTLLKDRGHDIVDSYNQADVIVLNTCAVRLETEERMKQRI CEEEEEECCCEECCCCCEEEEEEHHHCCCHHHHCCCCCCEEEEEEEEEEECHHHHHHHHH KELKKIGKKLIIAGCLVSSQPALVMSLAPESSIVGAQSIDKIVEAVESNKRGIFLEESKE HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCC LVTPRIFEGKISIIPIADGCAGDCNFCITKLARKKLRSYPPRNIVNAVKEAVQKGAVEIE CCCCEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEE LTAQDTAAYGLDINYNLVELLKEILEIEGNYMIRIGMMTPELAFKQIDEILEIIKDKRVY EEECCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHE KFLHLPVQSGDDRVLKLMNRKYTVDEYRELVKEIRDKIPIVNITTDIIIGHPGEDDEAFQ EHEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHH NTINLIKEIKFERIHLAMYSIRPNTRSASMPQVPDSIKKERMKIANEVYEEVAYSVHSEY HHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGSNALVLTTELGRKGSIIGRTINYIPVVIKDYDKLGEWINVKITEASFFDLRGKFIQ HCCCEEEEEECCCCCCCEECCCHHHEEEEEECHHHCCCEEEEEEECCCEECCCCCCCC >Mature Secondary Structure MKVYIETYGCALNKGDSYIMMTLLKDRGHDIVDSYNQADVIVLNTCAVRLETEERMKQRI CEEEEEECCCEECCCCCEEEEEEHHHCCCHHHHCCCCCCEEEEEEEEEEECHHHHHHHHH KELKKIGKKLIIAGCLVSSQPALVMSLAPESSIVGAQSIDKIVEAVESNKRGIFLEESKE HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCC LVTPRIFEGKISIIPIADGCAGDCNFCITKLARKKLRSYPPRNIVNAVKEAVQKGAVEIE CCCCEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEE LTAQDTAAYGLDINYNLVELLKEILEIEGNYMIRIGMMTPELAFKQIDEILEIIKDKRVY EEECCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHE KFLHLPVQSGDDRVLKLMNRKYTVDEYRELVKEIRDKIPIVNITTDIIIGHPGEDDEAFQ EHEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHH NTINLIKEIKFERIHLAMYSIRPNTRSASMPQVPDSIKKERMKIANEVYEEVAYSVHSEY HHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGSNALVLTTELGRKGSIIGRTINYIPVVIKDYDKLGEWINVKITEASFFDLRGKFIQ HCCCEEEEEECCCCCCCEECCCHHHEEEEEECHHHCCCEEEEEEECCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]