Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15920674

Identifier: 15920674

GI number: 15920674

Start: 465426

End: 465695

Strand: Reverse

Name: 15920674

Synonym: STS065

Alternate gene names: NA

Gene position: 465695-465426 (Counterclockwise)

Preceding gene: 15920677

Following gene: 15920671

Centisome position: 17.28

GC content: 35.93

Gene sequence:

>270_bases
ATGGCATCCCTTTATGACAATGAGGCAAAAATAAAACAAGCAATAATAATGTTACAAAAGATAGTAAATGATACTAGCGT
ACCAAGAAATATTAGAAGGGCCGCAACTGATGCAATAAGAAACTTGCAAGATTCATCATTAAGCCCGGCCGTAAGAGCCG
CAAATGCAATAGGCATACTCGAAGAAATAAGTCAAGACCCTAATATGCCCACACATACAAGAATATCAATTTGGAATGTA
GTATCTATGTTAGAAACTGTAAAAGACTGA

Upstream 100 bases:

>100_bases
TCTTAGTAGTTCTGCCGCTTTTTTCACACCAGTATCTTCCTTACTCATATGTATAAACTAAAAAACCAAAGTATAATAAA
TATGATACGGTGAATCAAAT

Downstream 100 bases:

>100_bases
TAAGCTTTTTATTCTTAACATTAGTTTTTTATTTTGTGCGGGGGTGCCCGAGCAAGGTCAAAGGGGTCGGGCTTAGGACC
TTAATGGTAAGATCCCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGILEEISQDPNMPTHTRISIWNV
VSMLETVKD

Sequences:

>Translated_89_residues
MASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGILEEISQDPNMPTHTRISIWNV
VSMLETVKD
>Mature_88_residues
ASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGILEEISQDPNMPTHTRISIWNVV
SMLETVKD

Specific function: Unknown

COG id: COG1698

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0147 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y460A_SULTO (Q975E9)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376343.1
- ProteinModelPortal:   Q975E9
- SMR:   Q975E9
- GeneID:   1458401
- GenomeReviews:   BA000023_GR
- KEGG:   sto:STS065
- NMPDR:   fig|273063.1.peg.511
- HOGENOM:   HBG321640
- OMA:   HTRTLIW
- ProtClustDB:   PRK04330
- BioCyc:   STOK273063:STS065-MONOMER
- HAMAP:   MF_00342
- InterPro:   IPR023130
- InterPro:   IPR005354
- ProDom:   PD029943

Pfam domain/function: PF03685 UPF0147

EC number: NA

Molecular weight: Translated: 9874; Mature: 9743

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGIL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EEISQDPNMPTHTRISIWNVVSMLETVKD
HHHHCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGIL
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EEISQDPNMPTHTRISIWNVVSMLETVKD
HHHHCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479