| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920674
Identifier: 15920674
GI number: 15920674
Start: 465426
End: 465695
Strand: Reverse
Name: 15920674
Synonym: STS065
Alternate gene names: NA
Gene position: 465695-465426 (Counterclockwise)
Preceding gene: 15920677
Following gene: 15920671
Centisome position: 17.28
GC content: 35.93
Gene sequence:
>270_bases ATGGCATCCCTTTATGACAATGAGGCAAAAATAAAACAAGCAATAATAATGTTACAAAAGATAGTAAATGATACTAGCGT ACCAAGAAATATTAGAAGGGCCGCAACTGATGCAATAAGAAACTTGCAAGATTCATCATTAAGCCCGGCCGTAAGAGCCG CAAATGCAATAGGCATACTCGAAGAAATAAGTCAAGACCCTAATATGCCCACACATACAAGAATATCAATTTGGAATGTA GTATCTATGTTAGAAACTGTAAAAGACTGA
Upstream 100 bases:
>100_bases TCTTAGTAGTTCTGCCGCTTTTTTCACACCAGTATCTTCCTTACTCATATGTATAAACTAAAAAACCAAAGTATAATAAA TATGATACGGTGAATCAAAT
Downstream 100 bases:
>100_bases TAAGCTTTTTATTCTTAACATTAGTTTTTTATTTTGTGCGGGGGTGCCCGAGCAAGGTCAAAGGGGTCGGGCTTAGGACC TTAATGGTAAGATCCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGILEEISQDPNMPTHTRISIWNV VSMLETVKD
Sequences:
>Translated_89_residues MASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGILEEISQDPNMPTHTRISIWNV VSMLETVKD >Mature_88_residues ASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGILEEISQDPNMPTHTRISIWNVV SMLETVKD
Specific function: Unknown
COG id: COG1698
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0147 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y460A_SULTO (Q975E9)
Other databases:
- EMBL: BA000023 - RefSeq: NP_376343.1 - ProteinModelPortal: Q975E9 - SMR: Q975E9 - GeneID: 1458401 - GenomeReviews: BA000023_GR - KEGG: sto:STS065 - NMPDR: fig|273063.1.peg.511 - HOGENOM: HBG321640 - OMA: HTRTLIW - ProtClustDB: PRK04330 - BioCyc: STOK273063:STS065-MONOMER - HAMAP: MF_00342 - InterPro: IPR023130 - InterPro: IPR005354 - ProDom: PD029943
Pfam domain/function: PF03685 UPF0147
EC number: NA
Molecular weight: Translated: 9874; Mature: 9743
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGIL CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH EEISQDPNMPTHTRISIWNVVSMLETVKD HHHHCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASLYDNEAKIKQAIIMLQKIVNDTSVPRNIRRAATDAIRNLQDSSLSPAVRAANAIGIL CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH EEISQDPNMPTHTRISIWNVVSMLETVKD HHHHCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479