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The map label for this gene is rpl15p [H]

Identifier: 15920620

GI number: 15920620

Start: 424682

End: 425116

Strand: Reverse

Name: rpl15p [H]

Synonym: ST0412

Alternate gene names: 15920620

Gene position: 425116-424682 (Counterclockwise)

Preceding gene: 15920621

Following gene: 15920619

Centisome position: 15.78

GC content: 32.18

Gene sequence:

>435_bases
ATGACTGTGAGAAAAGAAAAGAAAAGCAGAAAATATAGAGGATATAGGACTCATGGTTGGGGAACAAAAGGACAACATAG
AGATAGAGGTGCACAAGGAAGTAGGCAAATTGGAATGCATAAGGAAAAATGGTCATGGTTAGTAAAATATGGAGAAGGAT
GGTATGGAAAGCATGGATTTGTTAATCCTACAAGTAAAGTGTATAATGTTATTACAATGAGAAAGCTTCAAGAACTTATT
GAAAAAGGCGAAATAAAAATAAAGGATGAGAATGGAAAGAAAGTAGTTGATTTAACTGAATATAGATATGATAAACTTAT
AGGCTCATCTGGACTAAAAATACCACTAGTAATTAAGGTGAATATGGCCAGTAAAAAAGCAATTGAAAAAGTTAAGGAAT
TAGGAGGACAAATTATATTAACCACAAGTGAATAG

Upstream 100 bases:

>100_bases
TGGTGGTTTTAAAGGAAAAATAAATAGACCTTTTAGTGTTAAAGGTGAATTTGGTTATAGAGGAGAAAAAATTAATGAAC
TAATTAAGAGGATGGTATAA

Downstream 100 bases:

>100_bases
GCTTTTTTAGAGTAGTATGGGTTTTGTTGATTTTCTTGCTACACTAGGAGAATATTTACCAGCTGTAACTAAACCTAAAG
ATAGACCTTCTTTGGCAACT

Product: 50S ribosomal protein L15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTVRKEKKSRKYRGYRTHGWGTKGQHRDRGAQGSRQIGMHKEKWSWLVKYGEGWYGKHGFVNPTSKVYNVITMRKLQELI
EKGEIKIKDENGKKVVDLTEYRYDKLIGSSGLKIPLVIKVNMASKKAIEKVKELGGQIILTTSE

Sequences:

>Translated_144_residues
MTVRKEKKSRKYRGYRTHGWGTKGQHRDRGAQGSRQIGMHKEKWSWLVKYGEGWYGKHGFVNPTSKVYNVITMRKLQELI
EKGEIKIKDENGKKVVDLTEYRYDKLIGSSGLKIPLVIKVNMASKKAIEKVKELGGQIILTTSE
>Mature_143_residues
TVRKEKKSRKYRGYRTHGWGTKGQHRDRGAQGSRQIGMHKEKWSWLVKYGEGWYGKHGFVNPTSKVYNVITMRKLQELIE
KGEIKIKDENGKKVVDLTEYRYDKLIGSSGLKIPLVIKVNMASKKAIEKVKELGGQIILTTSE

Specific function: Binds to the 23S rRNA [H]

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family [H]

Homologues:

Organism=Drosophila melanogaster, GI17136880, Length=150, Percent_Identity=34, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001196
- InterPro:   IPR021131 [H]

Pfam domain/function: PF00828 Ribosomal_L18e [H]

EC number: NA

Molecular weight: Translated: 16595; Mature: 16463

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRKEKKSRKYRGYRTHGWGTKGQHRDRGAQGSRQIGMHKEKWSWLVKYGEGWYGKHGF
CCCCCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCC
VNPTSKVYNVITMRKLQELIEKGEIKIKDENGKKVVDLTEYRYDKLIGSSGLKIPLVIKV
CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEE
NMASKKAIEKVKELGGQIILTTSE
CCCHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
TVRKEKKSRKYRGYRTHGWGTKGQHRDRGAQGSRQIGMHKEKWSWLVKYGEGWYGKHGF
CCCCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCC
VNPTSKVYNVITMRKLQELIEKGEIKIKDENGKKVVDLTEYRYDKLIGSSGLKIPLVIKV
CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEE
NMASKKAIEKVKELGGQIILTTSE
CCCHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10381320 [H]