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The map label for this gene is rpl30p

Identifier: 15920621

GI number: 15920621

Start: 425117

End: 425593

Strand: Reverse

Name: rpl30p

Synonym: ST0413

Alternate gene names: 15920621

Gene position: 425593-425117 (Counterclockwise)

Preceding gene: 15920622

Following gene: 15920620

Centisome position: 15.79

GC content: 30.4

Gene sequence:

>477_bases
ATGACTAGACTTTTAGGAATTATTAGAATAAGAGGATATGCAGGCACTCCCTGGTATATCCAGGATACATTGAAAATGCT
AAGATTACCAAGAAGATTTAATGCAATGGTGTATGAAGATTCATCATCCATTAGAGGGATGTTGAAAATAGCTGAACCTT
ACATAACATGGGGAGAGCTAAATGAAGAAGGACTTAAATTACTTCTAACTAGATTACATACTAAAATAGGTAATCTTAAA
ATAACAGATGACATACTTAAAAGTCAATTAAAGATAGAAAGTTACAATTTATTTGTAAAGAAGATTATGGACGGAGAAAT
AAAACTGCATAAACTTGATGATTATTTCAAATTACCTATACGACTTCACCCACCAAGTGGTGGTTTTAAAGGAAAAATAA
ATAGACCTTTTAGTGTTAAAGGTGAATTTGGTTATAGAGGAGAAAAAATTAATGAACTAATTAAGAGGATGGTATAA

Upstream 100 bases:

>100_bases
TCTACATATACTACAGAGAACTTTATAAAGGCTGGATATAATGCACTTTATAATACATATAAGTTTGTTACTCCAGTGGA
TTGGATGAGGAGGAAGTAAT

Downstream 100 bases:

>100_bases
ATGACTGTGAGAAAAGAAAAGAAAAGCAGAAAATATAGAGGATATAGGACTCATGGTTGGGGAACAAAAGGACAACATAG
AGATAGAGGTGCACAAGGAA

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTRLLGIIRIRGYAGTPWYIQDTLKMLRLPRRFNAMVYEDSSSIRGMLKIAEPYITWGELNEEGLKLLLTRLHTKIGNLK
ITDDILKSQLKIESYNLFVKKIMDGEIKLHKLDDYFKLPIRLHPPSGGFKGKINRPFSVKGEFGYRGEKINELIKRMV

Sequences:

>Translated_158_residues
MTRLLGIIRIRGYAGTPWYIQDTLKMLRLPRRFNAMVYEDSSSIRGMLKIAEPYITWGELNEEGLKLLLTRLHTKIGNLK
ITDDILKSQLKIESYNLFVKKIMDGEIKLHKLDDYFKLPIRLHPPSGGFKGKINRPFSVKGEFGYRGEKINELIKRMV
>Mature_157_residues
TRLLGIIRIRGYAGTPWYIQDTLKMLRLPRRFNAMVYEDSSSIRGMLKIAEPYITWGELNEEGLKLLLTRLHTKIGNLKI
TDDILKSQLKIESYNLFVKKIMDGEIKLHKLDDYFKLPIRLHPPSGGFKGKINRPFSVKGEFGYRGEKINELIKRMV

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

Organism=Homo sapiens, GI15431301, Length=162, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24583248, Length=166, Percent_Identity=28.9156626506024, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_SULTO (Q975K1)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376290.1
- ProteinModelPortal:   Q975K1
- GeneID:   1458346
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0413
- NMPDR:   fig|273063.1.peg.458
- HOGENOM:   HBG297538
- OMA:   RIKGQAD
- ProtClustDB:   PRK06049
- BioCyc:   STOK273063:ST0413-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01371_A
- InterPro:   IPR005997
- InterPro:   IPR016082
- Gene3D:   G3DSA:3.30.1390.20
- TIGRFAMs:   TIGR01309

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 18411; Mature: 18280

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLLGIIRIRGYAGTPWYIQDTLKMLRLPRRFNAMVYEDSSSIRGMLKIAEPYITWGEL
CCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHCEEEEECCHHHHHHHHHHCCEEECCCC
NEEGLKLLLTRLHTKIGNLKITDDILKSQLKIESYNLFVKKIMDGEIKLHKLDDYFKLPI
CHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCE
RLHPPSGGFKGKINRPFSVKGEFGYRGEKINELIKRMV
EEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TRLLGIIRIRGYAGTPWYIQDTLKMLRLPRRFNAMVYEDSSSIRGMLKIAEPYITWGEL
CCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHCEEEEECCHHHHHHHHHHCCEEECCCC
NEEGLKLLLTRLHTKIGNLKITDDILKSQLKIESYNLFVKKIMDGEIKLHKLDDYFKLPI
CHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCE
RLHPPSGGFKGKINRPFSVKGEFGYRGEKINELIKRMV
EEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479