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The map label for this gene is 15920525

Identifier: 15920525

GI number: 15920525

Start: 346756

End: 347187

Strand: Direct

Name: 15920525

Synonym: ST0326

Alternate gene names: NA

Gene position: 346756-347187 (Clockwise)

Preceding gene: 15920523

Following gene: 15920526

Centisome position: 12.87

GC content: 31.48

Gene sequence:

>432_bases
ATGAGTAGTAGAAGAGTTGCAACGGAATTAAATTCCCTTCTAGATAAAGCGATTGTTGTAAGGCTTATTAATAATAAAAT
CTACTACGGTACTTTATCTTCATATGAGCTATCACCATTTATTTTAACACTAACAAATGCAAAAGATAATGATAATAACA
CTTATTATAAAGTTATTTTAAATGGAAATTCTATAACTGAAATTCTAGTCAAATCTTCGCCTATATTTGATCCGAAAGAA
TTTGCAGATTTAGTGACGAAAGAGCTTAATTTACGTGCAGGAGACGCAAAAGTCTATGAGGAGGCGGGGGTTGTAGTAAT
ACTTGATAGGATAAAAGTTTCTGAAAATGGAGTGGAAGGAAGCGGACCCTTGGCACAAAGAATTTACGATTTATATAACG
ATTATATAAATAAGAAAAAGAAAGGATCTTAA

Upstream 100 bases:

>100_bases
GAGGTTATTTTACATGTAGTCTCGACTTTACCTTCAACCTGAACTGACATACCCTTTATAATAGTTTAATCTTAAATAAT
ATTAACTATTATTCATTTTG

Downstream 100 bases:

>100_bases
AATGGTAGGAGAATTTGAAATAAAAGATGAAGATCTAGCTGGTAGAATAGGAATCATAGAGACAAAAAGTGGAAAACTAG
AAACACCGGTATTCTTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Sm Ribonucleoprotein Core-Like Protein; Small Nuclear Ribonucleoprotein

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSSRRVATELNSLLDKAIVVRLINNKIYYGTLSSYELSPFILTLTNAKDNDNNTYYKVILNGNSITEILVKSSPIFDPKE
FADLVTKELNLRAGDAKVYEEAGVVVILDRIKVSENGVEGSGPLAQRIYDLYNDYINKKKKGS

Sequences:

>Translated_143_residues
MSSRRVATELNSLLDKAIVVRLINNKIYYGTLSSYELSPFILTLTNAKDNDNNTYYKVILNGNSITEILVKSSPIFDPKE
FADLVTKELNLRAGDAKVYEEAGVVVILDRIKVSENGVEGSGPLAQRIYDLYNDYINKKKKGS
>Mature_142_residues
SSRRVATELNSLLDKAIVVRLINNKIYYGTLSSYELSPFILTLTNAKDNDNNTYYKVILNGNSITEILVKSSPIFDPKEF
ADLVTKELNLRAGDAKVYEEAGVVVILDRIKVSENGVEGSGPLAQRIYDLYNDYINKKKKGS

Specific function: Unknown

COG id: COG1958

COG function: function code K; Small nuclear ribonucleoprotein (snRNP) homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15996; Mature: 15865

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRRVATELNSLLDKAIVVRLINNKIYYGTLSSYELSPFILTLTNAKDNDNNTYYKVIL
CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEE
NGNSITEILVKSSPIFDPKEFADLVTKELNLRAGDAKVYEEAGVVVILDRIKVSENGVEG
CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEEEECCCCCCC
SGPLAQRIYDLYNDYINKKKKGS
CCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSRRVATELNSLLDKAIVVRLINNKIYYGTLSSYELSPFILTLTNAKDNDNNTYYKVIL
CCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEE
NGNSITEILVKSSPIFDPKEFADLVTKELNLRAGDAKVYEEAGVVVILDRIKVSENGVEG
CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEEEECCCCCCC
SGPLAQRIYDLYNDYINKKKKGS
CCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA