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The map label for this gene is 159041806

Identifier: 159041806

GI number: 159041806

Start: 1312036

End: 1312449

Strand: Reverse

Name: 159041806

Synonym: Cmaq_1241

Alternate gene names: NA

Gene position: 1312449-1312036 (Counterclockwise)

Preceding gene: 159041807

Following gene: 159041805

Centisome position: 63.17

GC content: 46.38

Gene sequence:

>414_bases
ATGGTTGATCAATCCCTATCAGTACCGAAGTACTGGAGGAGGATACCCCAGTACTATAGGCTCACTGCCCTTAAATGCAG
GAAATGCGGTAAGGTTTACTTCCCACCCAGGGCCGTCTGCGAATGCGGTTCAAGGGAATTTGAGGATGTTGAGTTACCTA
GGAGGGGTAGGTTAATTGAATTCACTGTACTTAGGAGCGTCACGTCTGATTTCGAAAAGCAGAGGCCGTTAATATTCGGT
ATAGTTGACTTAAATGGGGTTAGGGTGCTTGGGCAATTAGTCGACTGCCCAAACCCGGAGAAGCTTAGTGATAATGCTGA
GGTTGAGGTGGTGTTTAGGAGGGTTAAGGAGGATAGTGACTACGGTATAATTTACTACGGTTTTAAGTTAAGGCCATTGA
AGGGGTGTTGGTGA

Upstream 100 bases:

>100_bases
AAACCATTTAACGGCCTAAACGCCGAGGCAGCGGTGGTTGAGGATATGGTTGGTGTGGATCAGGAGAGTGTAGTCTTCAT
GCTTAAGGTGGTGAAGTAGC

Downstream 100 bases:

>100_bases
TGGCGGTAGGCATAGTTGGTTGGGGTGCGTACATACCTAGGTATAGGATTAAGACCCGTGAAATAGCTGAGGCTTGGGGT
GATGATGCCCTCAGGATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MVDQSLSVPKYWRRIPQYYRLTALKCRKCGKVYFPPRAVCECGSREFEDVELPRRGRLIEFTVLRSVTSDFEKQRPLIFG
IVDLNGVRVLGQLVDCPNPEKLSDNAEVEVVFRRVKEDSDYGIIYYGFKLRPLKGCW

Sequences:

>Translated_137_residues
MVDQSLSVPKYWRRIPQYYRLTALKCRKCGKVYFPPRAVCECGSREFEDVELPRRGRLIEFTVLRSVTSDFEKQRPLIFG
IVDLNGVRVLGQLVDCPNPEKLSDNAEVEVVFRRVKEDSDYGIIYYGFKLRPLKGCW
>Mature_137_residues
MVDQSLSVPKYWRRIPQYYRLTALKCRKCGKVYFPPRAVCECGSREFEDVELPRRGRLIEFTVLRSVTSDFEKQRPLIFG
IVDLNGVRVLGQLVDCPNPEKLSDNAEVEVVFRRVKEDSDYGIIYYGFKLRPLKGCW

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 16027; Mature: 16027

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDQSLSVPKYWRRIPQYYRLTALKCRKCGKVYFPPRAVCECGSREFEDVELPRRGRLIE
CCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEH
FTVLRSVTSDFEKQRPLIFGIVDLNGVRVLGQLVDCPNPEKLSDNAEVEVVFRRVKEDSD
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
YGIIYYGFKLRPLKGCW
CEEEEEEEEECCCCCCC
>Mature Secondary Structure
MVDQSLSVPKYWRRIPQYYRLTALKCRKCGKVYFPPRAVCECGSREFEDVELPRRGRLIE
CCCCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEH
FTVLRSVTSDFEKQRPLIFGIVDLNGVRVLGQLVDCPNPEKLSDNAEVEVVFRRVKEDSD
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
YGIIYYGFKLRPLKGCW
CEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]