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The map label for this gene is yfnA [H]

Identifier: 159041622

GI number: 159041622

Start: 1104832

End: 1106115

Strand: Reverse

Name: yfnA [H]

Synonym: Cmaq_1055

Alternate gene names: 159041622

Gene position: 1106115-1104832 (Counterclockwise)

Preceding gene: 159041624

Following gene: 159041621

Centisome position: 53.24

GC content: 47.9

Gene sequence:

>1284_bases
GTGAGGAGGAGTAAGTTAACACTATGGGAGGCCACAGCCGTGGGGTTAGGTAACATTATTGGGGCAGGCATATTCGTTAT
GGCTGGTTCAGCAATAAACCTAGCTGGACCTGGGGCGTTACTCGCCTTCATAGTGACTGCGGCCCTAGCCATTGGGGTTG
GGTTAAATAGTGCTGAAATGGCCTCAGCCTTCCCCAACGTTGAGGGTGGGGTGTACTCCTTCGCTAAATTAACCCTAGGT
GACTCCGTGGGTTTCCTGGTTGGTTTACTTAGGGTTGTATCCTACGTAATCGGTGGGGCTGCTGTTGCGTTAGGGTTCTC
AGGTTACTTAACCTCAATGGGGGTGCCGCGGTACTTAACTTACCCAGTGTCAGTGGCGTTAATTGTGATTCTATCCCTAC
TCTACAGGTCTGGTTTAAAGATTGCCTCAGAGTTTGAGAAGTACTTAACGTCAATCAACGTGGCTGGCTTAGTAATATTC
ATTGCCGCTGGTTTACTTTACTCGGGTCCATTTAAGTCAAGTCACTTTAAGCCACTGCTACCTCATGGTTTATTCGGCCT
CATTGAATCATCGTCACTGGCCTTCTTCGCCTACTCAGGCTTCAACACAATAGCCACATTAACACCATCCGTGGAGAATG
GGGAGAGGAACGTGCCTAAGGCAATAATACTATCCTTAAGCATAACCACGGTAATATACATCCTAGTGGTCTTCACAATG
CTCTACATAGCCCCCTGGCAACTATACGGTACCAGGCCTGATCCATTAAGCTTCGCCCTTGAGGAGGCTAGGGCCCCCTA
TGTGGTTAGGTTAATTGTCTCATCAGTAGCCTTGTTATCAACCTTCACAGTGACGTTATCAATGATTATAGCTGGGGTAA
GGACCTTGAGCCAGATGGCTGAGGATAATGTAGCACCGAGGAGGCTTGCCCACGGTGACTGGCCACTGGTAATAGTGACT
ACGGCAACCTTAGCATCATTGGCGCTTGGTAACGTGGAGACCCTTGGCCTAGTGGCTAATTTCGGCGTCGTGTTCTCCTA
CATAACAACACCAATAGCCGTAGTGGTGGCTAGGAGGAGGGGTATTACTGGGTCCTTTAAGGCCCCCTTATTCCCAATAC
TGCAGTTACTAACCATTATCCTATCCCTACTAATCACCAGTGCCCTTGGTTATAATTCCCTTGAAATAGGGGCTATGACA
TTAATAGTAGGTATACTGATTTATGAGGTTCACGAGGAGTTTAACATTATTGGGAGGAGACGTAAAGTTACTGCGGATGG
TTGA

Upstream 100 bases:

>100_bases
TTAAAACAACCACCATTTCCCCTAAACCATAGTTACGGGGATTAAAAACCTTAATCGCACCTAAGGCATATCTTAAAATA
CACCGCACTACCTGGCATGC

Downstream 100 bases:

>100_bases
TCATGCTTAACATCACTGCTCAGGGAGGAAAGTTTTATATATCCTTACTCTAATGAGGGGTTGATGCGGATTCCGTTCTG
CGAATTCTGCGTGAAGACGA

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRRSKLTLWEATAVGLGNIIGAGIFVMAGSAINLAGPGALLAFIVTAALAIGVGLNSAEMASAFPNVEGGVYSFAKLTLG
DSVGFLVGLLRVVSYVIGGAAVALGFSGYLTSMGVPRYLTYPVSVALIVILSLLYRSGLKIASEFEKYLTSINVAGLVIF
IAAGLLYSGPFKSSHFKPLLPHGLFGLIESSSLAFFAYSGFNTIATLTPSVENGERNVPKAIILSLSITTVIYILVVFTM
LYIAPWQLYGTRPDPLSFALEEARAPYVVRLIVSSVALLSTFTVTLSMIIAGVRTLSQMAEDNVAPRRLAHGDWPLVIVT
TATLASLALGNVETLGLVANFGVVFSYITTPIAVVVARRRGITGSFKAPLFPILQLLTIILSLLITSALGYNSLEIGAMT
LIVGILIYEVHEEFNIIGRRRKVTADG

Sequences:

>Translated_427_residues
MRRSKLTLWEATAVGLGNIIGAGIFVMAGSAINLAGPGALLAFIVTAALAIGVGLNSAEMASAFPNVEGGVYSFAKLTLG
DSVGFLVGLLRVVSYVIGGAAVALGFSGYLTSMGVPRYLTYPVSVALIVILSLLYRSGLKIASEFEKYLTSINVAGLVIF
IAAGLLYSGPFKSSHFKPLLPHGLFGLIESSSLAFFAYSGFNTIATLTPSVENGERNVPKAIILSLSITTVIYILVVFTM
LYIAPWQLYGTRPDPLSFALEEARAPYVVRLIVSSVALLSTFTVTLSMIIAGVRTLSQMAEDNVAPRRLAHGDWPLVIVT
TATLASLALGNVETLGLVANFGVVFSYITTPIAVVVARRRGITGSFKAPLFPILQLLTIILSLLITSALGYNSLEIGAMT
LIVGILIYEVHEEFNIIGRRRKVTADG
>Mature_427_residues
MRRSKLTLWEATAVGLGNIIGAGIFVMAGSAINLAGPGALLAFIVTAALAIGVGLNSAEMASAFPNVEGGVYSFAKLTLG
DSVGFLVGLLRVVSYVIGGAAVALGFSGYLTSMGVPRYLTYPVSVALIVILSLLYRSGLKIASEFEKYLTSINVAGLVIF
IAAGLLYSGPFKSSHFKPLLPHGLFGLIESSSLAFFAYSGFNTIATLTPSVENGERNVPKAIILSLSITTVIYILVVFTM
LYIAPWQLYGTRPDPLSFALEEARAPYVVRLIVSSVALLSTFTVTLSMIIAGVRTLSQMAEDNVAPRRLAHGDWPLVIVT
TATLASLALGNVETLGLVANFGVVFSYITTPIAVVVARRRGITGSFKAPLFPILQLLTIILSLLITSALGYNSLEIGAMT
LIVGILIYEVHEEFNIIGRRRKVTADG

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI181337167, Length=329, Percent_Identity=28.2674772036474, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI110347453, Length=334, Percent_Identity=29.6407185628743, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI258614005, Length=346, Percent_Identity=26.5895953757225, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI258614003, Length=346, Percent_Identity=26.5895953757225, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI258645169, Length=346, Percent_Identity=26.5895953757225, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI4507047, Length=373, Percent_Identity=27.0777479892761, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI115648063, Length=246, Percent_Identity=27.2357723577236, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI115648022, Length=246, Percent_Identity=27.2357723577236, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI71999149, Length=246, Percent_Identity=30.8943089430894, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI87081869, Length=413, Percent_Identity=23.728813559322, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1786302, Length=312, Percent_Identity=25.3205128205128, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786602, Length=438, Percent_Identity=24.8858447488584, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790653, Length=323, Percent_Identity=24.4582043343653, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081708, Length=414, Percent_Identity=23.1884057971014, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87081915, Length=320, Percent_Identity=22.8125, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786789, Length=422, Percent_Identity=24.8815165876777, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1786694, Length=394, Percent_Identity=24.3654822335025, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17533459, Length=329, Percent_Identity=28.8753799392097, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17532491, Length=337, Percent_Identity=28.1899109792285, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17531343, Length=338, Percent_Identity=28.4023668639053, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24668806, Length=391, Percent_Identity=27.3657289002558, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI21356285, Length=391, Percent_Identity=27.3657289002558, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24668802, Length=391, Percent_Identity=27.3657289002558, Blast_Score=115, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24667468, Length=243, Percent_Identity=31.2757201646091, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI161077963, Length=273, Percent_Identity=26.3736263736264, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24666159, Length=296, Percent_Identity=27.7027027027027, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI221512776, Length=296, Percent_Identity=27.7027027027027, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI281366235, Length=342, Percent_Identity=27.4853801169591, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI116007820, Length=342, Percent_Identity=27.4853801169591, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI116007818, Length=288, Percent_Identity=28.4722222222222, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI85725152, Length=288, Percent_Identity=28.4722222222222, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI221331183, Length=249, Percent_Identity=28.1124497991968, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17647653, Length=249, Percent_Identity=28.1124497991968, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24664379, Length=249, Percent_Identity=28.1124497991968, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 45231; Mature: 45231

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSKLTLWEATAVGLGNIIGAGIFVMAGSAINLAGPGALLAFIVTAALAIGVGLNSAEM
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHH
ASAFPNVEGGVYSFAKLTLGDSVGFLVGLLRVVSYVIGGAAVALGFSGYLTSMGVPRYLT
HHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YPVSVALIVILSLLYRSGLKIASEFEKYLTSINVAGLVIFIAAGLLYSGPFKSSHFKPLL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PHGLFGLIESSSLAFFAYSGFNTIATLTPSVENGERNVPKAIILSLSITTVIYILVVFTM
CHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LYIAPWQLYGTRPDPLSFALEEARAPYVVRLIVSSVALLSTFTVTLSMIIAGVRTLSQMA
HHHCCHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDNVAPRRLAHGDWPLVIVTTATLASLALGNVETLGLVANFGVVFSYITTPIAVVVARRR
HCCCCCHHHCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GITGSFKAPLFPILQLLTIILSLLITSALGYNSLEIGAMTLIVGILIYEVHEEFNIIGRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RKVTADG
CEECCCC
>Mature Secondary Structure
MRRSKLTLWEATAVGLGNIIGAGIFVMAGSAINLAGPGALLAFIVTAALAIGVGLNSAEM
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHH
ASAFPNVEGGVYSFAKLTLGDSVGFLVGLLRVVSYVIGGAAVALGFSGYLTSMGVPRYLT
HHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YPVSVALIVILSLLYRSGLKIASEFEKYLTSINVAGLVIFIAAGLLYSGPFKSSHFKPLL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PHGLFGLIESSSLAFFAYSGFNTIATLTPSVENGERNVPKAIILSLSITTVIYILVVFTM
CHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LYIAPWQLYGTRPDPLSFALEEARAPYVVRLIVSSVALLSTFTVTLSMIIAGVRTLSQMA
HHHCCHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDNVAPRRLAHGDWPLVIVTTATLASLALGNVETLGLVANFGVVFSYITTPIAVVVARRR
HCCCCCHHHCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GITGSFKAPLFPILQLLTIILSLLITSALGYNSLEIGAMTLIVGILIYEVHEEFNIIGRR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RKVTADG
CEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]