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The map label for this gene is rpl30p

Identifier: 159041624

GI number: 159041624

Start: 1106775

End: 1107332

Strand: Reverse

Name: rpl30p

Synonym: Cmaq_1057

Alternate gene names: 159041624

Gene position: 1107332-1106775 (Counterclockwise)

Preceding gene: 159041628

Following gene: 159041622

Centisome position: 53.3

GC content: 47.85

Gene sequence:

>558_bases
ATGCAGAGTACCCAGGGGATTGAGCGGAGTGGGGAGCATGGGAGGGTTATTGTTGCTGCAGTTAGGATTAGGGGTTTAGT
TGACGTTAGCCCTGAGGTTAACCATACGTTAAACCTACTGAGGCTTAGGAGGAGGTTCACGTGCAGTGTATACGTGTTGT
CTGATTCAATTAAGGGTATGCTTAAGTCTGTTGAGAGTTGGGCTACGTGGGGTGAGTTAAGTAGGGATACATTAATTCAA
CTACTCAGGAGGAGGGGTAGGATTGTGGGTGACTTACCTTTAACGGATGAGTACCTTAAGAAGTATGGGTGGGGTAGTGT
TGAGGAGTTGGTGGATGCTTACCTTAAGGGTGAGGTTAAGAGCCTATGGTGCAGGAGGGGTGAGGGACCTAGGATGATTA
ACGGTAAGGCCTCCTGCATACCGGGCCTTAAACCATTCTTCAGACTACACCCACCTAAGGGTGGATTCAAGGGGAGTATT
AAGAAGCCCTATGGGGCTGGTGGGGAGTTGGGTTACAGGGGTTTAGACATTAATGATCTTATACTGAGGATGATTTAA

Upstream 100 bases:

>100_bases
TTATTATTAAGCCTTAGTGGATTGTTCAGTGGATTGGTGTTAATTAGGGGTAGGGTATTTTTAGGTACAGTTATAAAGGG
GGCTTAGGCAAGGGGTCATT

Downstream 100 bases:

>100_bases
GCCCTAAGCCTCTTAACCACTAGGCCGGGTGCATTAACCTCCTTAAACCTCCTAATCCTAATAATAGGCCCCCTTGGTGC
GTAGGTTAACCCATCTATGA

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MQSTQGIERSGEHGRVIVAAVRIRGLVDVSPEVNHTLNLLRLRRRFTCSVYVLSDSIKGMLKSVESWATWGELSRDTLIQ
LLRRRGRIVGDLPLTDEYLKKYGWGSVEELVDAYLKGEVKSLWCRRGEGPRMINGKASCIPGLKPFFRLHPPKGGFKGSI
KKPYGAGGELGYRGLDINDLILRMI

Sequences:

>Translated_185_residues
MQSTQGIERSGEHGRVIVAAVRIRGLVDVSPEVNHTLNLLRLRRRFTCSVYVLSDSIKGMLKSVESWATWGELSRDTLIQ
LLRRRGRIVGDLPLTDEYLKKYGWGSVEELVDAYLKGEVKSLWCRRGEGPRMINGKASCIPGLKPFFRLHPPKGGFKGSI
KKPYGAGGELGYRGLDINDLILRMI
>Mature_185_residues
MQSTQGIERSGEHGRVIVAAVRIRGLVDVSPEVNHTLNLLRLRRRFTCSVYVLSDSIKGMLKSVESWATWGELSRDTLIQ
LLRRRGRIVGDLPLTDEYLKKYGWGSVEELVDAYLKGEVKSLWCRRGEGPRMINGKASCIPGLKPFFRLHPPKGGFKGSI
KKPYGAGGELGYRGLDINDLILRMI

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_CALMQ (A8MDN0)

Other databases:

- EMBL:   CP000852
- RefSeq:   YP_001540876.1
- ProteinModelPortal:   A8MDN0
- SMR:   A8MDN0
- GeneID:   5710095
- GenomeReviews:   CP000852_GR
- KEGG:   cma:Cmaq_1057
- HOGENOM:   HBG297538
- OMA:   CIPYLKP
- ProtClustDB:   PRK06049
- BioCyc:   CMAQ397948:CMAQ_1057-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01371_A
- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR016082
- Gene3D:   G3DSA:1.10.15.30
- Gene3D:   G3DSA:3.30.1390.20
- TIGRFAMs:   TIGR01309

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 20768; Mature: 20768

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTQGIERSGEHGRVIVAAVRIRGLVDVSPEVNHTLNLLRLRRRFTCSVYVLSDSIKGM
CCCCCCCCCCCCCCCEEEEEEEHHHHEECCCCHHHHHHHHHHHHHHEEEEEEECHHHHHH
LKSVESWATWGELSRDTLIQLLRRRGRIVGDLPLTDEYLKKYGWGSVEELVDAYLKGEVK
HHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
SLWCRRGEGPRMINGKASCIPGLKPFFRLHPPKGGFKGSIKKPYGAGGELGYRGLDINDL
HHHHHCCCCCCEECCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ILRMI
HHHCC
>Mature Secondary Structure
MQSTQGIERSGEHGRVIVAAVRIRGLVDVSPEVNHTLNLLRLRRRFTCSVYVLSDSIKGM
CCCCCCCCCCCCCCCEEEEEEEHHHHEECCCCHHHHHHHHHHHHHHEEEEEEECHHHHHH
LKSVESWATWGELSRDTLIQLLRRRGRIVGDLPLTDEYLKKYGWGSVEELVDAYLKGEVK
HHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHH
SLWCRRGEGPRMINGKASCIPGLKPFFRLHPPKGGFKGSIKKPYGAGGELGYRGLDINDL
HHHHHCCCCCCEECCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
ILRMI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA