Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

Click here to switch to the map view.

The map label for this gene is 159041605

Identifier: 159041605

GI number: 159041605

Start: 1089227

End: 1089724

Strand: Reverse

Name: 159041605

Synonym: Cmaq_1038

Alternate gene names: NA

Gene position: 1089724-1089227 (Counterclockwise)

Preceding gene: 159041606

Following gene: 159041604

Centisome position: 52.45

GC content: 46.39

Gene sequence:

>498_bases
ATGAGTATTAAGTTTGATGTGGTGGATGTTAAGTATCCACCTGACTCAAACGTAATAATAGGGTACTCGCACTTCATAAT
GACTGTTGAGGATCTTTACGAAGCCCTAGTATCCTCAGTCCCAGGCATTAAGTTTGGGTTAGCCTTCTGCGAGGCCAGTG
GTAAGAGGCTTATTAGGCATGAGGGTAATGATGAGGAGCTTAGGGGCGCCGCCATTGACCTATGCTCAAGAATAGCGGCT
GGGCACGTATTCGTAATATTCATTAGGAACGCCTACCCGATAAACGTCTTAAACGCTATAAAGAATGTTAAGGAGGTTAC
CAGGATACTTGCAGCCACAGGTAACCCCCTCTCCATAATAGTTGCTGAAATAGCCCCTGAACGCAGGGGTGTGGTTGGTG
TTGTGGATGGTTACTCACCCCTAGGGGTTGAAAAACCTGAGGATGCTAAGGAACGTAAGGAATTGGTTAGGAGGTTCGGT
TACAAGATGGCTCCTTAA

Upstream 100 bases:

>100_bases
GAATTATGATTAGGCTGTGGTGAATTAAAAGTTAAGGTTCATACCGGTGTTATGGCACGTGAGTGTAATGCTTAAATCCC
TTAATTAGTTAAAGGTTAAT

Downstream 100 bases:

>100_bases
CCGGTGATTAAACTGAACTGTGATGATGCCTACTGGGATTTAAGGAATAGGCTTGAGGTGGCTTGTGGACCATTATCAAT
GTTTAGGAGAATAATGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSIKFDVVDVKYPPDSNVIIGYSHFIMTVEDLYEALVSSVPGIKFGLAFCEASGKRLIRHEGNDEELRGAAIDLCSRIAA
GHVFVIFIRNAYPINVLNAIKNVKEVTRILAATGNPLSIIVAEIAPERRGVVGVVDGYSPLGVEKPEDAKERKELVRRFG
YKMAP

Sequences:

>Translated_165_residues
MSIKFDVVDVKYPPDSNVIIGYSHFIMTVEDLYEALVSSVPGIKFGLAFCEASGKRLIRHEGNDEELRGAAIDLCSRIAA
GHVFVIFIRNAYPINVLNAIKNVKEVTRILAATGNPLSIIVAEIAPERRGVVGVVDGYSPLGVEKPEDAKERKELVRRFG
YKMAP
>Mature_164_residues
SIKFDVVDVKYPPDSNVIIGYSHFIMTVEDLYEALVSSVPGIKFGLAFCEASGKRLIRHEGNDEELRGAAIDLCSRIAAG
HVFVIFIRNAYPINVLNAIKNVKEVTRILAATGNPLSIIVAEIAPERRGVVGVVDGYSPLGVEKPEDAKERKELVRRFGY
KMAP

Specific function: Unknown

COG id: COG1839

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18144; Mature: 18013

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKFDVVDVKYPPDSNVIIGYSHFIMTVEDLYEALVSSVPGIKFGLAFCEASGKRLIRH
CCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECC
EGNDEELRGAAIDLCSRIAAGHVFVIFIRNAYPINVLNAIKNVKEVTRILAATGNPLSII
CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
VAEIAPERRGVVGVVDGYSPLGVEKPEDAKERKELVRRFGYKMAP
EEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIKFDVVDVKYPPDSNVIIGYSHFIMTVEDLYEALVSSVPGIKFGLAFCEASGKRLIRH
CEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECC
EGNDEELRGAAIDLCSRIAAGHVFVIFIRNAYPINVLNAIKNVKEVTRILAATGNPLSII
CCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
VAEIAPERRGVVGVVDGYSPLGVEKPEDAKERKELVRRFGYKMAP
EEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA